RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W IRA2P19158 3079 aa0.89□□□□□ -2.27
MRPL40YPL173W PDR15Q04182 1529 aaKnown RBP0.89□□□□□ -2.27
MRPL40YPL173W PAU16P35994 123 aa0.88□□□□□ -2.27
MRPL40YPL173W PAU15P40585 124 aa0.88□□□□□ -2.27
MRPL40YPL173W RPO31P04051 1460 aa0.87□□□□□ -2.27
MRPL40YPL173W AUA1P32450 94 aa0.87□□□□□ -2.27
MRPL40YPL173W HUR1P45820 110 aa0.87□□□□□ -2.27
MRPL40YPL173W LSM6Q06406 86 aaKnown RBP0.87□□□□□ -2.27
MRPL40YPL173W GNA1P43577 159 aaPredicted RBP0.86□□□□□ -2.27
MRPL40YPL173W MIC10Q96VH5 97 aa0.86□□□□□ -2.27
MRPL40YPL173W LAA1P39526 2014 aa0.86□□□□□ -2.27
MRPL40YPL173W RPA190P10964 1664 aaKnown RBP0.85□□□□□ -2.27
MRPL40YPL173W YLR255CO13574 117 aa0.85□□□□□ -2.27
MRPL40YPL173W CDC25P04821 1589 aa0.85□□□□□ -2.27
MRPL40YPL173W YGR164WP53291 111 aa0.85□□□□□ -2.27
MRPL40YPL173W YMR103CQ04436 120 aa0.85□□□□□ -2.27
MRPL40YPL173W YPK9Q12697 1472 aa0.85□□□□□ -2.27
MRPL40YPL173W VMA21P41806 77 aa0.84□□□□□ -2.27
MRPL40YPL173W RPS12P48589 143 aaKnown RBP0.84□□□□□ -2.27
MRPL40YPL173W DNF2Q12675 1612 aa0.84□□□□□ -2.28
MRPL40YPL173W NTE1Q04958 1679 aa0.84□□□□□ -2.28
MRPL40YPL173W LYS2P07702 1392 aa0.83□□□□□ -2.28
MRPL40YPL173W IRA1P18963 3092 aa0.83□□□□□ -2.28
MRPL40YPL173W GEA2P39993 1459 aaKnown RBP0.82□□□□□ -2.28
MRPL40YPL173W YHR138CP38841 114 aaPredicted RBP0.82□□□□□ -2.28
MRPL40YPL173W YOL118CQ08259 102 aa0.82□□□□□ -2.28
MRPL40YPL173W YCL048W-AQ2V2Q2 79 aa0.82□□□□□ -2.28
MRPL40YPL173W YLR419WQ06698 1435 aaKnown RBP0.81□□□□□ -2.28
MRPL40YPL173W YCR101CP25607 182 aa0.81□□□□□ -2.28
MRPL40YPL173W IMP2P46972 177 aa0.81□□□□□ -2.28
MRPL40YPL173W SWC7Q06707 132 aa0.81□□□□□ -2.28
MRPL40YPL173W YOS1Q3E834 85 aa0.81□□□□□ -2.28
MRPL40YPL173W KRE5P22023 1365 aa0.81□□□□□ -2.28
MRPL40YPL173W THO2P53552 1597 aaKnown RBP0.8□□□□□ -2.28
MRPL40YPL173W UBC4P15731 148 aa0.8□□□□□ -2.28
MRPL40YPL173W RGI1P40043 161 aaPredicted RBP0.8□□□□□ -2.28
MRPL40YPL173W ESC1Q03661 1658 aaKnown RBP0.8□□□□□ -2.28
MRPL40YPL173W URB1P34241 1764 aaKnown RBP0.8□□□□□ -2.28
MRPL40YPL173W TSC11P40061 1430 aa0.8□□□□□ -2.28
MRPL40YPL173W YCF1P39109 1515 aaKnown RBP0.79□□□□□ -2.28
MRPL40YPL173W CCW14O13547 238 aa0.79□□□□□ -2.28
MRPL40YPL173W SRB6P32570 121 aa0.79□□□□□ -2.28
MRPL40YPL173W GCV3P39726 170 aaPredicted RBP0.79□□□□□ -2.28
MRPL40YPL173W SEC16P48415 2195 aaKnown RBP0.79□□□□□ -2.28
MRPL40YPL173W BPT1P14772 1559 aa0.79□□□□□ -2.28
MRPL40YPL173W YBR090CP38253 122 aa0.78□□□□□ -2.28
MRPL40YPL173W YHR173CP38864 112 aa0.78□□□□□ -2.28
MRPL40YPL173W YDR210WQ03482 75 aa0.78□□□□□ -2.28
MRPL40YPL173W YMR090WQ04304 227 aaKnown RBP0.78□□□□□ -2.28
MRPL40YPL173W UBC5P15732 148 aa0.77□□□□□ -2.29
MRPL40YPL173W PAU5P43575 122 aa0.77□□□□□ -2.29
MRPL40YPL173W YPL038W-AQ3E7B4 63 aa0.77□□□□□ -2.29
MRPL40YPL173W SNF2P22082 1703 aa0.77□□□□□ -2.29
MRPL40YPL173W URA2P07259 2214 aaKnown RBP0.76□□□□□ -2.29
MRPL40YPL173W PEP1P32319 1579 aa0.76□□□□□ -2.29
MRPL40YPL173W SHU1P38751 150 aa0.76□□□□□ -2.29
MRPL40YPL173W YIL086CP40503 102 aa0.76□□□□□ -2.29
MRPL40YPL173W YCR095W-AQ3E787 52 aa0.76□□□□□ -2.29
MRPL40YPL173W TOP2P06786 1428 aaKnown RBP0.75□□□□□ -2.29
MRPL40YPL173W RSM19P53733 91 aaPredicted RBP0.75□□□□□ -2.29
MRPL40YPL173W YBR072C-AQ3E794 53 aa0.74□□□□□ -2.29
MRPL40YPL173W PDR11P40550 1411 aa0.73□□□□□ -2.29
MRPL40YPL173W SEC7P11075 2009 aaKnown RBP0.73□□□□□ -2.29
MRPL40YPL173W PAU6P0CE90 120 aa0.73□□□□□ -2.29
MRPL40YPL173W PAU18P0CE91 120 aa0.73□□□□□ -2.29
MRPL40YPL173W FYV7Q12247 151 aa0.73□□□□□ -2.29
MRPL40YPL173W YDR010CQ12426 110 aa0.73□□□□□ -2.29
MRPL40YPL173W YOL164W-AQ3E7A5 60 aa0.73□□□□□ -2.29
MRPL40YPL173W YRF1-6P53819 1859 aa0.73□□□□□ -2.29
MRPL40YPL173W TY3B-IQ7LHG5 1498 aaKnown RBP0.73□□□□□ -2.29
MRPL40YPL173W SSK2P53599 1579 aa0.72□□□□□ -2.29
MRPL40YPL173W MPC2P38857 129 aa0.72□□□□□ -2.29
MRPL40YPL173W SNA2P56508 79 aa0.72□□□□□ -2.29
MRPL40YPL173W KSH1Q8TGJ3 72 aa0.72□□□□□ -2.29
MRPL40YPL173W DYN1P36022 4092 aa0.72□□□□□ -2.29
MRPL40YPL173W CAT8P39113 1433 aa0.72□□□□□ -2.29
MRPL40YPL173W BUD4P47136 1447 aa0.72□□□□□ -2.29
MRPL40YPL173W SEN1Q00416 2231 aaKnown RBP0.71□□□□□ -2.3
MRPL40YPL173W ROX3P25046 220 aa0.71□□□□□ -2.3
MRPL40YPL173W MRX7P53869 86 aa0.71□□□□□ -2.3
MRPL40YPL173W COX12Q01519 83 aa0.71□□□□□ -2.3
MRPL40YPL173W MIX14Q04341 121 aa0.71□□□□□ -2.3
MRPL40YPL173W MEC1P38111 2368 aa0.71□□□□□ -2.3
MRPL40YPL173W TY3B-GQ99315 1547 aa0.7□□□□□ -2.3
MRPL40YPL173W RPA12P32529 125 aaKnown RBP0.7□□□□□ -2.3
MRPL40YPL173W YOR289WQ12012 251 aaPredicted RBP0.7□□□□□ -2.3
MRPL40YPL173W COX19Q3E731 98 aa0.69□□□□□ -2.3
MRPL40YPL173W YNR034W-AQ3E841 98 aa0.69□□□□□ -2.3
MRPL40YPL173W SSN2P38931 1420 aa0.69□□□□□ -2.3
MRPL40YPL173W GEA1P47102 1408 aaPredicted RBP0.69□□□□□ -2.3
MRPL40YPL173W TY4B-HP0C2J7 1802 aa0.68□□□□□ -2.3
MRPL40YPL173W SRB8P25648 1427 aa0.68□□□□□ -2.3
MRPL40YPL173W YBL071CP38185 102 aa0.68□□□□□ -2.3
MRPL40YPL173W PDR10P51533 1564 aa0.68□□□□□ -2.3
MRPL40YPL173W RRT15Q3E811 62 aa0.68□□□□□ -2.3
MRPL40YPL173W TRA1P38811 3744 aa0.68□□□□□ -2.3
MRPL40YPL173W CSF1Q12150 2958 aa0.68□□□□□ -2.3
MRPL40YPL173W POL1P13382 1468 aa0.67□□□□□ -2.3
MRPL40YPL173W HMRA1P0CY11 126 aa0.67□□□□□ -2.3
MRPL40YPL173W MRPL38P35996 138 aaPredicted RBP0.67□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 77.6 ms