Protein–RNA interactions for Protein: P35996

MRPL38, 54S ribosomal protein L38, mitochondrial, yeastyeast

Predicted RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL38P35996 NSR1YGR159C 1245 nt16.31■□□□□ 0.2
MRPL38P35996 YML009W-BYML009W-B 477 nt16.25■□□□□ 0.19
MRPL38P35996 NOP1YDL014W 984 nt15.81■□□□□ 0.12
MRPL38P35996 MDJ1YFL016C 1536 nt14.51□□□□□ -0.09
MRPL38P35996 YKL036CYKL036C 393 nt14.47□□□□□ -0.09
MRPL38P35996 Q0297Q0297 156 nt13.81□□□□□ -0.2
MRPL38P35996 SRX1YKL086W 384 nt13.81□□□□□ -0.2
MRPL38P35996 YJL027CYJL027C 417 nt13.46□□□□□ -0.25
MRPL38P35996 SCS3YGL126W 1143 nt13.08□□□□□ -0.32
MRPL38P35996 YCR051WYCR051W 669 nt13.04□□□□□ -0.32
MRPL38P35996 DBP2YNL112W 1641 nt12.81□□□□□ -0.36
MRPL38P35996 TRN1tP(UGG)A 72 nt12.55□□□□□ -0.4
MRPL38P35996 SUF9tP(UGG)F 72 nt12.55□□□□□ -0.4
MRPL38P35996 SUF8tP(UGG)H 72 nt12.55□□□□□ -0.4
MRPL38P35996 tP(UGG)LtP(UGG)L 72 nt12.55□□□□□ -0.4
MRPL38P35996 SUF7tP(UGG)M 72 nt12.55□□□□□ -0.4
MRPL38P35996 tP(UGG)N1tP(UGG)N1 72 nt12.55□□□□□ -0.4
MRPL38P35996 tP(UGG)N2tP(UGG)N2 72 nt12.55□□□□□ -0.4
MRPL38P35996 tP(UGG)O1tP(UGG)O1 72 nt12.55□□□□□ -0.4
MRPL38P35996 SUF11tP(UGG)O2 72 nt12.55□□□□□ -0.4
MRPL38P35996 YOL085CYOL085C 342 nt12.52□□□□□ -0.41
MRPL38P35996 YBR190WYBR190W 312 nt12.47□□□□□ -0.41
MRPL38P35996 RPP1BYDL130W 321 nt12.37□□□□□ -0.43
MRPL38P35996 CCC1YLR220W 969 nt12.35□□□□□ -0.43
MRPL38P35996 PKP1YIL042C 1185 nt12.29□□□□□ -0.44
MRPL38P35996 RTC3YHR087W 336 nt12.13□□□□□ -0.47
MRPL38P35996 RVS167YDR388W 1449 nt12.05□□□□□ -0.48
MRPL38P35996 SCJ1YMR214W 1134 nt11.93□□□□□ -0.5
MRPL38P35996 tP(UGG)O3tP(UGG)O3 72 nt11.82□□□□□ -0.52
MRPL38P35996 PET122YER153C 765 nt11.8□□□□□ -0.52
MRPL38P35996 ATS1YAL020C 1002 nt11.68□□□□□ -0.54
MRPL38P35996 SCR1SCR1 522 nt11.68□□□□□ -0.54
MRPL38P35996 SHR5YOL110W 714 nt11.62□□□□□ -0.55
MRPL38P35996 YDJ1YNL064C 1230 nt11.48□□□□□ -0.57
MRPL38P35996 RRN5YLR141W 1092 nt11.46□□□□□ -0.57
MRPL38P35996 PUT4YOR348C 1884 nt11.37□□□□□ -0.59
MRPL38P35996 URN1YPR152C 1398 nt11.33□□□□□ -0.6
MRPL38P35996 DEP1YAL013W 1218 nt11.25□□□□□ -0.61
MRPL38P35996 YER088W-BYER088W-B 147 nt11.23□□□□□ -0.61
MRPL38P35996 OPI9YLR338W 858 nt11.22□□□□□ -0.61
MRPL38P35996 RPN10YHR200W 807 nt11.19□□□□□ -0.62
MRPL38P35996 RSB1YOR049C 1065 nt11.18□□□□□ -0.62
MRPL38P35996 GAR1YHR089C 618 nt11.17□□□□□ -0.62
MRPL38P35996 YNL208WYNL208W 600 nt11.13□□□□□ -0.63
MRPL38P35996 SAH1YER043C 1350 nt11.13□□□□□ -0.63
MRPL38P35996 ARE1YCR048W 1833 nt11.12□□□□□ -0.63
MRPL38P35996 POA1YBR022W 534 nt10.98□□□□□ -0.65
MRPL38P35996 YHR049C-AYHR049C-A 297 nt10.97□□□□□ -0.65
MRPL38P35996 PUN1YLR414C 792 nt10.91□□□□□ -0.66
MRPL38P35996 PST2YDR032C 597 nt10.85□□□□□ -0.67
MRPL38P35996 TIR1YER011W 765 nt10.83□□□□□ -0.68
MRPL38P35996 YJR018WYJR018W 363 nt10.82□□□□□ -0.68
MRPL38P35996 SSA3YBL075C 1950 nt10.82□□□□□ -0.68
MRPL38P35996 BSC6YOL137W 1494 nt10.78□□□□□ -0.68
MRPL38P35996 PTC2YER089C 1395 nt10.74□□□□□ -0.69
MRPL38P35996 SSA1YAL005C 1929 nt10.69□□□□□ -0.7
MRPL38P35996 BUD23YCR047C 828 nt10.69□□□□□ -0.7
MRPL38P35996 NAB2YGL122C 1578 nt10.65□□□□□ -0.71
MRPL38P35996 YJR120WYJR120W 351 nt10.61□□□□□ -0.71
MRPL38P35996 RPP2BYDR382W 333 nt10.58□□□□□ -0.72
MRPL38P35996 INM2YDR287W 879 nt10.48□□□□□ -0.73
MRPL38P35996 DAL1YIR027C 1383 nt10.48□□□□□ -0.73
MRPL38P35996 FIS1YIL065C 468 nt10.47□□□□□ -0.73
MRPL38P35996 SRB2YHR041C 633 nt10.46□□□□□ -0.73
MRPL38P35996 SHU1YHL006C 453 nt10.4□□□□□ -0.74
MRPL38P35996 FPR4YLR449W 1179 nt10.4□□□□□ -0.74
MRPL38P35996 PHO4YFR034C 939 nt10.37□□□□□ -0.75
MRPL38P35996 YKL097CYKL097C 411 nt10.35□□□□□ -0.75
MRPL38P35996 BDH2YAL061W 1254 nt10.35□□□□□ -0.75
MRPL38P35996 SPT5YML010W 3192 nt10.34□□□□□ -0.75
MRPL38P35996 YBL100CYBL100C 315 nt10.32□□□□□ -0.76
MRPL38P35996 WWM1YFL010C 636 nt10.3□□□□□ -0.76
MRPL38P35996 YGR021WYGR021W 873 nt10.27□□□□□ -0.77
MRPL38P35996 YAL037C-BYAL037C-B 975 nt10.24□□□□□ -0.77
MRPL38P35996 LSM3YLR438C-A 270 nt10.22□□□□□ -0.77
MRPL38P35996 YPS1YLR120C 1710 nt10.21□□□□□ -0.77
MRPL38P35996 YFL021C-AYFL021C-A 855 nt10.2□□□□□ -0.78
MRPL38P35996 HOM6YJR139C 1080 nt10.2□□□□□ -0.78
MRPL38P35996 FUN26YAL022C 1554 nt10.19□□□□□ -0.78
MRPL38P35996 TRM9YML014W 840 nt10.17□□□□□ -0.78
MRPL38P35996 YDR095CYDR095C 411 nt10.15□□□□□ -0.78
MRPL38P35996 MEP2YNL142W 1500 nt10.15□□□□□ -0.78
MRPL38P35996 MNP1YGL068W 585 nt10.09□□□□□ -0.79
MRPL38P35996 YHR165W-AYHR165W-A 312 nt10.09□□□□□ -0.79
MRPL38P35996 CCT6YDR188W 1641 nt10.08□□□□□ -0.8
MRPL38P35996 ALF1YNL148C 765 nt10.08□□□□□ -0.8
MRPL38P35996 RKM5YLR137W 1104 nt10.05□□□□□ -0.8
MRPL38P35996 SUF2tP(AGG)C 72 nt10.02□□□□□ -0.81
MRPL38P35996 SUF10tP(AGG)N 72 nt10.02□□□□□ -0.81
MRPL38P35996 SSA4YER103W 1929 nt10.01□□□□□ -0.81
MRPL38P35996 RPP2AYOL039W 321 nt9.96□□□□□ -0.82
MRPL38P35996 SIS1YNL007C 1059 nt9.95□□□□□ -0.82
MRPL38P35996 YOL037CYOL037C 354 nt9.95□□□□□ -0.82
MRPL38P35996 DCW1YKL046C 1350 nt9.95□□□□□ -0.82
MRPL38P35996 YOR139CYOR139C 393 nt9.94□□□□□ -0.82
MRPL38P35996 PTP1YDL230W 1008 nt9.91□□□□□ -0.82
MRPL38P35996 NPL3YDR432W 1245 nt9.89□□□□□ -0.83
MRPL38P35996 EMI2YDR516C 1503 nt9.86□□□□□ -0.83
MRPL38P35996 YMR090WYMR090W 684 nt9.83□□□□□ -0.84
MRPL38P35996 CAC2YML102W 1407 nt9.82□□□□□ -0.84
Retrieved 100 of 7,029 protein–RNA pairs in 11.9 ms