Protein–RNA interactions for Protein: P41806

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, yeastyeast

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA21P41806 NSR1YGR159C 1245 nt15.88■□□□□ 0.13
VMA21P41806 YML009W-BYML009W-B 477 nt15.28■□□□□ 0.04
VMA21P41806 MDJ1YFL016C 1536 nt14.82□□□□□ -0.04
VMA21P41806 NOP1YDL014W 984 nt14.55□□□□□ -0.08
VMA21P41806 YJL027CYJL027C 417 nt13.58□□□□□ -0.24
VMA21P41806 SSA3YBL075C 1950 nt13.39□□□□□ -0.27
VMA21P41806 YBR190WYBR190W 312 nt12.85□□□□□ -0.35
VMA21P41806 DBP2YNL112W 1641 nt12.83□□□□□ -0.36
VMA21P41806 SRX1YKL086W 384 nt12.72□□□□□ -0.37
VMA21P41806 YKL036CYKL036C 393 nt12.71□□□□□ -0.37
VMA21P41806 Q0297Q0297 156 nt12.51□□□□□ -0.41
VMA21P41806 RTC3YHR087W 336 nt12.47□□□□□ -0.41
VMA21P41806 PUT4YOR348C 1884 nt12.27□□□□□ -0.44
VMA21P41806 YCR051WYCR051W 669 nt11.97□□□□□ -0.49
VMA21P41806 TRN1tP(UGG)A 72 nt11.97□□□□□ -0.49
VMA21P41806 SUF9tP(UGG)F 72 nt11.97□□□□□ -0.49
VMA21P41806 SUF8tP(UGG)H 72 nt11.97□□□□□ -0.49
VMA21P41806 tP(UGG)LtP(UGG)L 72 nt11.97□□□□□ -0.49
VMA21P41806 SUF7tP(UGG)M 72 nt11.97□□□□□ -0.49
VMA21P41806 tP(UGG)N1tP(UGG)N1 72 nt11.97□□□□□ -0.49
VMA21P41806 tP(UGG)N2tP(UGG)N2 72 nt11.97□□□□□ -0.49
VMA21P41806 tP(UGG)O1tP(UGG)O1 72 nt11.97□□□□□ -0.49
VMA21P41806 SUF11tP(UGG)O2 72 nt11.97□□□□□ -0.49
VMA21P41806 RVS167YDR388W 1449 nt11.84□□□□□ -0.51
VMA21P41806 ARE1YCR048W 1833 nt11.81□□□□□ -0.52
VMA21P41806 SPT5YML010W 3192 nt11.81□□□□□ -0.52
VMA21P41806 POA1YBR022W 534 nt11.79□□□□□ -0.52
VMA21P41806 CCC1YLR220W 969 nt11.78□□□□□ -0.52
VMA21P41806 SSA4YER103W 1929 nt11.74□□□□□ -0.53
VMA21P41806 BSC6YOL137W 1494 nt11.7□□□□□ -0.54
VMA21P41806 SCJ1YMR214W 1134 nt11.66□□□□□ -0.54
VMA21P41806 YHR049C-AYHR049C-A 297 nt11.64□□□□□ -0.55
VMA21P41806 SAH1YER043C 1350 nt11.54□□□□□ -0.56
VMA21P41806 OPI9YLR338W 858 nt11.43□□□□□ -0.58
VMA21P41806 URN1YPR152C 1398 nt11.41□□□□□ -0.58
VMA21P41806 BDF1YLR399C 2061 nt11.39□□□□□ -0.59
VMA21P41806 BUD23YCR047C 828 nt11.28□□□□□ -0.6
VMA21P41806 SHR5YOL110W 714 nt11.27□□□□□ -0.61
VMA21P41806 TAT1YBR069C 1860 nt11.22□□□□□ -0.61
VMA21P41806 RPP1BYDL130W 321 nt11.21□□□□□ -0.61
VMA21P41806 SCS3YGL126W 1143 nt11.18□□□□□ -0.62
VMA21P41806 DEP1YAL013W 1218 nt11.17□□□□□ -0.62
VMA21P41806 PAC11YDR488C 1602 nt11.13□□□□□ -0.63
VMA21P41806 PUN1YLR414C 792 nt11.08□□□□□ -0.64
VMA21P41806 MEP2YNL142W 1500 nt11.08□□□□□ -0.64
VMA21P41806 PTC2YER089C 1395 nt11.07□□□□□ -0.64
VMA21P41806 tP(UGG)O3tP(UGG)O3 72 nt11.06□□□□□ -0.64
VMA21P41806 RPN10YHR200W 807 nt11.06□□□□□ -0.64
VMA21P41806 NAB2YGL122C 1578 nt11.04□□□□□ -0.64
VMA21P41806 YOL085CYOL085C 342 nt11.04□□□□□ -0.64
VMA21P41806 PKP1YIL042C 1185 nt10.94□□□□□ -0.66
VMA21P41806 YNL208WYNL208W 600 nt10.94□□□□□ -0.66
VMA21P41806 NVJ2YPR091C 2313 nt10.87□□□□□ -0.67
VMA21P41806 DCW1YKL046C 1350 nt10.87□□□□□ -0.67
VMA21P41806 FIS1YIL065C 468 nt10.84□□□□□ -0.67
VMA21P41806 YJR018WYJR018W 363 nt10.84□□□□□ -0.67
VMA21P41806 PET122YER153C 765 nt10.81□□□□□ -0.68
VMA21P41806 YBR220CYBR220C 1683 nt10.79□□□□□ -0.68
VMA21P41806 DAL1YIR027C 1383 nt10.75□□□□□ -0.69
VMA21P41806 YPS1YLR120C 1710 nt10.73□□□□□ -0.69
VMA21P41806 YDJ1YNL064C 1230 nt10.72□□□□□ -0.69
VMA21P41806 EMI2YDR516C 1503 nt10.71□□□□□ -0.69
VMA21P41806 YMR090WYMR090W 684 nt10.68□□□□□ -0.7
VMA21P41806 PHO4YFR034C 939 nt10.66□□□□□ -0.7
VMA21P41806 FPR4YLR449W 1179 nt10.66□□□□□ -0.7
VMA21P41806 YHR165W-AYHR165W-A 312 nt10.62□□□□□ -0.71
VMA21P41806 PCH2YBR186W 1695 nt10.6□□□□□ -0.71
VMA21P41806 SDH1YKL148C 1923 nt10.59□□□□□ -0.71
VMA21P41806 GUT2YIL155C 1950 nt10.57□□□□□ -0.72
VMA21P41806 YDL221WYDL221W 552 nt10.57□□□□□ -0.72
VMA21P41806 GAR1YHR089C 618 nt10.57□□□□□ -0.72
VMA21P41806 YJR120WYJR120W 351 nt10.56□□□□□ -0.72
VMA21P41806 YDR095CYDR095C 411 nt10.55□□□□□ -0.72
VMA21P41806 INM2YDR287W 879 nt10.55□□□□□ -0.72
VMA21P41806 SEC11YIR022W 504 nt10.51□□□□□ -0.73
VMA21P41806 SCR1SCR1 522 nt10.45□□□□□ -0.74
VMA21P41806 CAC2YML102W 1407 nt10.44□□□□□ -0.74
VMA21P41806 PIB2YGL023C 1908 nt10.41□□□□□ -0.74
VMA21P41806 PTP1YDL230W 1008 nt10.4□□□□□ -0.74
VMA21P41806 RPP2BYDR382W 333 nt10.4□□□□□ -0.74
VMA21P41806 RRN5YLR141W 1092 nt10.4□□□□□ -0.74
VMA21P41806 SCC4YER147C 1875 nt10.4□□□□□ -0.75
VMA21P41806 YBL100CYBL100C 315 nt10.34□□□□□ -0.75
VMA21P41806 RPP2AYOL039W 321 nt10.33□□□□□ -0.76
VMA21P41806 SSA1YAL005C 1929 nt10.31□□□□□ -0.76
VMA21P41806 IRC15YPL017C 1500 nt10.3□□□□□ -0.76
VMA21P41806 FPS1YLL043W 2010 nt10.27□□□□□ -0.77
VMA21P41806 TIR1YER011W 765 nt10.26□□□□□ -0.77
VMA21P41806 RTF1YGL244W 1677 nt10.25□□□□□ -0.77
VMA21P41806 YSC84YHR016C 1407 nt10.24□□□□□ -0.77
VMA21P41806 GIS3YLR094C 1509 nt10.24□□□□□ -0.77
VMA21P41806 YER088W-BYER088W-B 147 nt10.2□□□□□ -0.78
VMA21P41806 YHL050CYHL050C 2094 nt10.19□□□□□ -0.78
VMA21P41806 FUN26YAL022C 1554 nt10.19□□□□□ -0.78
VMA21P41806 ALF1YNL148C 765 nt10.17□□□□□ -0.78
VMA21P41806 YJL225CYJL225C 5277 nt10.12□□□□□ -0.79
VMA21P41806 PTK1YKL198C 1989 nt10.12□□□□□ -0.79
VMA21P41806 BOP3YNL042W 1191 nt10.12□□□□□ -0.79
VMA21P41806 UME6YDR207C 2511 nt10.11□□□□□ -0.79
VMA21P41806 BDH2YAL061W 1254 nt10.09□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms