RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W MTC1P47018 478 aaKnown RBP14.7□□□□□ -0.06
MRPL40YPL173W FAP1P53971 965 aa13.97□□□□□ -0.17
MRPL40YPL173W PRY3P47033 881 aa13.18□□□□□ -0.3
MRPL40YPL173W DRS1P32892 752 aaKnown RBP12.98□□□□□ -0.33
MRPL40YPL173W PRI1P10363 409 aa12.8□□□□□ -0.36
MRPL40YPL173W AAD16Q02895 342 aa12.79□□□□□ -0.36
MRPL40YPL173W YCK3P39962 524 aa12.5□□□□□ -0.41
MRPL40YPL173W HAA1Q12753 694 aaKnown RBP12.34□□□□□ -0.43
MRPL40YPL173W ISW2Q08773 1120 aa12.31□□□□□ -0.44
MRPL40YPL173W RPG1P38249 964 aaKnown RBP12.21□□□□□ -0.45
MRPL40YPL173W TSR3Q12094 313 aaKnown RBP12.04□□□□□ -0.48
MRPL40YPL173W DIP2Q12220 943 aaPredicted RBP11.65□□□□□ -0.54
MRPL40YPL173W MRPL32P25348 183 aa11.56□□□□□ -0.56
MRPL40YPL173W RSE1Q04693 1361 aaKnown RBP11.47□□□□□ -0.57
MRPL40YPL173W YGL015CP33199 130 aa11.29□□□□□ -0.6
MRPL40YPL173W RPL17AP05740 184 aaKnown RBP11.14□□□□□ -0.63
MRPL40YPL173W REB1P21538 810 aa11.14□□□□□ -0.63
MRPL40YPL173W RPL17BP46990 184 aaKnown RBP11.14□□□□□ -0.63
MRPL40YPL173W AVT3P36062 692 aa11.07□□□□□ -0.64
MRPL40YPL173W CDC27P38042 758 aa10.89□□□□□ -0.67
MRPL40YPL173W BUD31P25337 157 aaPredicted RBP10.69□□□□□ -0.7
MRPL40YPL173W YKR023WP36119 530 aaKnown RBP10.69□□□□□ -0.7
MRPL40YPL173W UBP10P53874 792 aaPredicted RBP10.67□□□□□ -0.7
MRPL40YPL173W SPT21P35209 758 aa10.66□□□□□ -0.7
MRPL40YPL173W MAP2P38174 421 aaKnown RBP10.61□□□□□ -0.71
MRPL40YPL173W TFC8Q12308 588 aa10.47□□□□□ -0.73
MRPL40YPL173W BFR2Q06631 534 aaKnown RBP10.45□□□□□ -0.74
MRPL40YPL173W HOP09932 586 aa10.44□□□□□ -0.74
MRPL40YPL173W DCD1P06773 312 aa10.42□□□□□ -0.74
MRPL40YPL173W SCY1P53009 804 aa10.27□□□□□ -0.77
MRPL40YPL173W TIF4632P39936 914 aaKnown RBP10.21□□□□□ -0.77
MRPL40YPL173W TGL3P40308 642 aa10.2□□□□□ -0.78
MRPL40YPL173W SLX5P32828 619 aaKnown RBP10.18□□□□□ -0.78
MRPL40YPL173W RIM101P33400 625 aa10.12□□□□□ -0.79
MRPL40YPL173W BCH2P36122 765 aa10.09□□□□□ -0.79
MRPL40YPL173W SIS1P25294 352 aaKnown RBP10.07□□□□□ -0.8
MRPL40YPL173W UBP9P39967 754 aa10.07□□□□□ -0.8
MRPL40YPL173W EPS1P40557 701 aa9.78□□□□□ -0.84
MRPL40YPL173W BDF1P35817 686 aa9.77□□□□□ -0.85
MRPL40YPL173W OXP1P28273 1286 aa9.75□□□□□ -0.85
MRPL40YPL173W MST1P07236 462 aa9.72□□□□□ -0.85
MRPL40YPL173W YBL029C-AQ3E756 94 aa9.64□□□□□ -0.87
MRPL40YPL173W YOR238WQ08634 303 aa9.61□□□□□ -0.87
MRPL40YPL173W PTP3P40048 928 aa9.59□□□□□ -0.87
MRPL40YPL173W NSR1P27476 414 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
MRPL40YPL173W YIL055CP40523 627 aaKnown RBP9.56□□□□□ -0.88
MRPL40YPL173W VNX1P42839 908 aa9.51□□□□□ -0.89
MRPL40YPL173W BBC1P47068 1157 aa9.46□□□□□ -0.9
MRPL40YPL173W RSM7P47150 247 aa9.46□□□□□ -0.9
MRPL40YPL173W YAP5P40574 245 aa9.45□□□□□ -0.9
MRPL40YPL173W AI2P03876 854 aa9.43□□□□□ -0.9
MRPL40YPL173W SPP1Q03012 353 aa9.4□□□□□ -0.9
MRPL40YPL173W WSC3Q12215 556 aa9.37□□□□□ -0.91
MRPL40YPL173W YAH1Q12184 172 aaKnown RBP9.32□□□□□ -0.92
MRPL40YPL173W AIR2Q12476 344 aaKnown RBP9.31□□□□□ -0.92
MRPL40YPL173W TIF11P38912 153 aaKnown RBP9.29□□□□□ -0.92
MRPL40YPL173W FKH1P40466 484 aa9.28□□□□□ -0.92
MRPL40YPL173W GTT3P39996 337 aa9.24□□□□□ -0.93
MRPL40YPL173W YJL171CP46992 396 aa9.2□□□□□ -0.94
MRPL40YPL173W YLR271WQ06152 274 aa9.18□□□□□ -0.94
MRPL40YPL173W PSD2P53037 1138 aaKnown RBP9.14□□□□□ -0.95
MRPL40YPL173W LDB19Q12502 818 aa9.14□□□□□ -0.95
MRPL40YPL173W ULI1P43604 169 aa9.13□□□□□ -0.95
MRPL40YPL173W IOC2Q12072 812 aa9.13□□□□□ -0.95
MRPL40YPL173W PIB1Q06651 286 aa9.11□□□□□ -0.95
MRPL40YPL173W BMT6Q12291 365 aa9.05□□□□□ -0.96
MRPL40YPL173W MRM1P25270 412 aa9.04□□□□□ -0.96
MRPL40YPL173W MSB4Q12317 492 aa9.03□□□□□ -0.96
MRPL40YPL173W TFA1P36100 482 aa8.99□□□□□ -0.97
MRPL40YPL173W EAP1P36041 632 aaKnown RBP8.98□□□□□ -0.97
MRPL40YPL173W YOL036WQ08206 761 aa8.95□□□□□ -0.98
MRPL40YPL173W RTG1P32607 177 aa8.92□□□□□ -0.98
MRPL40YPL173W SET4P42948 560 aa8.92□□□□□ -0.98
MRPL40YPL173W TRP5P00931 707 aaKnown RBP8.91□□□□□ -0.98
MRPL40YPL173W VPS29P38759 282 aa8.89□□□□□ -0.99
MRPL40YPL173W YMR1P47147 688 aaKnown RBP RIP-Chip data8.89□□□□□ -0.99not detected
MRPL40YPL173W DBP1P24784 617 aaKnown RBP8.87□□□□□ -0.99
MRPL40YPL173W NCR1Q12200 1170 aa8.87□□□□□ -0.99
MRPL40YPL173W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
MRPL40YPL173W SSP1P38871 571 aa8.86□□□□□ -0.99
MRPL40YPL173W YNL035CP53962 389 aaKnown RBP8.84□□□□□ -0.99
MRPL40YPL173W VMA1P17255 1071 aaKnown RBP8.83□□□□□ -1
MRPL40YPL173W SEC61P32915 480 aa8.83□□□□□ -1
MRPL40YPL173W YFR006WP43590 535 aa8.83□□□□□ -1
MRPL40YPL173W SAM3Q08986 587 aa8.82□□□□□ -1
MRPL40YPL173W STS1P38637 319 aa8.81□□□□□ -1
MRPL40YPL173W CST9Q06032 482 aa8.81□□□□□ -1
MRPL40YPL173W RTG3P38165 486 aa8.8□□□□□ -1
MRPL40YPL173W MGA2P40578 1113 aa8.74□□□□□ -1.01
MRPL40YPL173W DAN4P47179 1161 aa8.7□□□□□ -1.02
MRPL40YPL173W RCR1P38212 213 aa8.68□□□□□ -1.02
MRPL40YPL173W TFG1P41895 735 aaPredicted RBP8.68□□□□□ -1.02
MRPL40YPL173W JIP4Q03361 876 aa8.67□□□□□ -1.02
MRPL40YPL173W SAP30P38429 201 aa8.66□□□□□ -1.02
MRPL40YPL173W ABP1P15891 592 aaKnown RBP8.65□□□□□ -1.02
MRPL40YPL173W GYP5Q12344 894 aa8.63□□□□□ -1.03
MRPL40YPL173W YDL129WQ07555 291 aa8.62□□□□□ -1.03
MRPL40YPL173W CHL1P22516 861 aaPredicted RBP8.6□□□□□ -1.03
MRPL40YPL173W BCK2P33306 851 aa8.6□□□□□ -1.03
MRPL40YPL173W HTA1P04911 132 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 20.4 ms