Protein–RNA interactions for Protein: Q00416

SEN1, Helicase SEN1, yeastyeast

Known RBP Predictions only

Length 2,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEN1Q00416 YML009W-BYML009W-B 477 nt19.94■□□□□ 0.78
SEN1Q00416 NOP1YDL014W 984 nt19.41■□□□□ 0.7
SEN1Q00416 YKL036CYKL036C 393 nt18.89■□□□□ 0.61
SEN1Q00416 NSR1YGR159C 1245 nt18.84■□□□□ 0.61
SEN1Q00416 YJL027CYJL027C 417 nt17.87■□□□□ 0.45
SEN1Q00416 SCS3YGL126W 1143 nt17.72■□□□□ 0.43
SEN1Q00416 Q0297Q0297 156 nt17.42■□□□□ 0.38
SEN1Q00416 SRX1YKL086W 384 nt17.37■□□□□ 0.37
SEN1Q00416 SCJ1YMR214W 1134 nt16.6■□□□□ 0.25
SEN1Q00416 YCR051WYCR051W 669 nt16.34■□□□□ 0.21
SEN1Q00416 YOL085CYOL085C 342 nt16.3■□□□□ 0.2
SEN1Q00416 PKP1YIL042C 1185 nt16.1■□□□□ 0.17
SEN1Q00416 ATS1YAL020C 1002 nt16.06■□□□□ 0.16
SEN1Q00416 MDJ1YFL016C 1536 nt16■□□□□ 0.15
SEN1Q00416 RPP1BYDL130W 321 nt15.49■□□□□ 0.07
SEN1Q00416 RTC3YHR087W 336 nt15.2■□□□□ 0.02
SEN1Q00416 TRN1tP(UGG)A 72 nt15.17■□□□□ 0.02
SEN1Q00416 SUF9tP(UGG)F 72 nt15.17■□□□□ 0.02
SEN1Q00416 SUF8tP(UGG)H 72 nt15.17■□□□□ 0.02
SEN1Q00416 tP(UGG)LtP(UGG)L 72 nt15.17■□□□□ 0.02
SEN1Q00416 SUF7tP(UGG)M 72 nt15.17■□□□□ 0.02
SEN1Q00416 tP(UGG)N1tP(UGG)N1 72 nt15.17■□□□□ 0.02
SEN1Q00416 tP(UGG)N2tP(UGG)N2 72 nt15.17■□□□□ 0.02
SEN1Q00416 tP(UGG)O1tP(UGG)O1 72 nt15.17■□□□□ 0.02
SEN1Q00416 SUF11tP(UGG)O2 72 nt15.17■□□□□ 0.02
SEN1Q00416 SCR1SCR1 522 nt15□□□□□ -0.01
SEN1Q00416 CCC1YLR220W 969 nt14.93□□□□□ -0.02
SEN1Q00416 PET122YER153C 765 nt14.8□□□□□ -0.04
SEN1Q00416 RRN5YLR141W 1092 nt14.74□□□□□ -0.05
SEN1Q00416 PST2YDR032C 597 nt14.67□□□□□ -0.06
SEN1Q00416 YKL097CYKL097C 411 nt14.63□□□□□ -0.07
SEN1Q00416 RSB1YOR049C 1065 nt14.62□□□□□ -0.07
SEN1Q00416 DBP2YNL112W 1641 nt14.61□□□□□ -0.07
SEN1Q00416 tP(UGG)O3tP(UGG)O3 72 nt14.49□□□□□ -0.09
SEN1Q00416 YER088W-BYER088W-B 147 nt14.39□□□□□ -0.11
SEN1Q00416 RVS167YDR388W 1449 nt14.03□□□□□ -0.16
SEN1Q00416 YOR139CYOR139C 393 nt14□□□□□ -0.17
SEN1Q00416 YDJ1YNL064C 1230 nt13.87□□□□□ -0.19
SEN1Q00416 SHU1YHL006C 453 nt13.82□□□□□ -0.2
SEN1Q00416 GAR1YHR089C 618 nt13.77□□□□□ -0.21
SEN1Q00416 NPL3YDR432W 1245 nt13.6□□□□□ -0.23
SEN1Q00416 SHR5YOL110W 714 nt13.59□□□□□ -0.23
SEN1Q00416 YAL037C-BYAL037C-B 975 nt13.45□□□□□ -0.26
SEN1Q00416 YBR190WYBR190W 312 nt13.29□□□□□ -0.28
SEN1Q00416 BSC6YOL137W 1494 nt13.25□□□□□ -0.29
SEN1Q00416 tM(CAU)CtM(CAU)C 72 nt13.22□□□□□ -0.29
SEN1Q00416 IMT4tM(CAU)E 72 nt13.22□□□□□ -0.29
SEN1Q00416 IMT3tM(CAU)J3 72 nt13.22□□□□□ -0.29
SEN1Q00416 IMT1tM(CAU)O1 72 nt13.22□□□□□ -0.29
SEN1Q00416 IMT2tM(CAU)P 72 nt13.22□□□□□ -0.29
SEN1Q00416 DEP1YAL013W 1218 nt13□□□□□ -0.33
SEN1Q00416 MOT3YMR070W 1473 nt13□□□□□ -0.33
SEN1Q00416 YOL037CYOL037C 354 nt13□□□□□ -0.33
SEN1Q00416 TIR1YER011W 765 nt12.94□□□□□ -0.34
SEN1Q00416 RPN10YHR200W 807 nt12.94□□□□□ -0.34
SEN1Q00416 MNP1YGL068W 585 nt12.88□□□□□ -0.35
SEN1Q00416 SSA1YAL005C 1929 nt12.87□□□□□ -0.35
SEN1Q00416 PUS2YGL063W 1113 nt12.85□□□□□ -0.35
SEN1Q00416 HOM6YJR139C 1080 nt12.84□□□□□ -0.35
SEN1Q00416 YGR021WYGR021W 873 nt12.84□□□□□ -0.35
SEN1Q00416 MRPL8YJL063C 717 nt12.84□□□□□ -0.35
SEN1Q00416 UBX6YJL048C 1191 nt12.79□□□□□ -0.36
SEN1Q00416 WWM1YFL010C 636 nt12.76□□□□□ -0.37
SEN1Q00416 SRB2YHR041C 633 nt12.75□□□□□ -0.37
SEN1Q00416 YNL208WYNL208W 600 nt12.71□□□□□ -0.37
SEN1Q00416 URN1YPR152C 1398 nt12.65□□□□□ -0.38
SEN1Q00416 ADO1YJR105W 1023 nt12.65□□□□□ -0.38
SEN1Q00416 FMP45YDL222C 930 nt12.64□□□□□ -0.39
SEN1Q00416 YPR011CYPR011C 981 nt12.62□□□□□ -0.39
SEN1Q00416 YLR281CYLR281C 468 nt12.61□□□□□ -0.39
SEN1Q00416 WHI5YOR083W 888 nt12.58□□□□□ -0.39
SEN1Q00416 YEL076C-AYEL076C-A 651 nt12.57□□□□□ -0.4
SEN1Q00416 YEL076CYEL076C 651 nt12.57□□□□□ -0.4
SEN1Q00416 YLR464WYLR464W 651 nt12.57□□□□□ -0.4
SEN1Q00416 YFL015W-AYFL015W-A 318 nt12.52□□□□□ -0.41
SEN1Q00416 YFL021C-AYFL021C-A 855 nt12.47□□□□□ -0.41
SEN1Q00416 SIS1YNL007C 1059 nt12.47□□□□□ -0.41
SEN1Q00416 YLR236CYLR236C 324 nt12.45□□□□□ -0.42
SEN1Q00416 DSK2YMR276W 1122 nt12.45□□□□□ -0.42
SEN1Q00416 RKM5YLR137W 1104 nt12.44□□□□□ -0.42
SEN1Q00416 SSA3YBL075C 1950 nt12.37□□□□□ -0.43
SEN1Q00416 OPI9YLR338W 858 nt12.3□□□□□ -0.44
SEN1Q00416 YCH1YGR203W 447 nt12.3□□□□□ -0.44
SEN1Q00416 RTG1YOL067C 534 nt12.3□□□□□ -0.44
SEN1Q00416 YDR094WYDR094W 336 nt12.27□□□□□ -0.45
SEN1Q00416 YJR018WYJR018W 363 nt12.25□□□□□ -0.45
SEN1Q00416 IMP2'YIL154C 1041 nt12.18□□□□□ -0.46
SEN1Q00416 SBA1YKL117W 651 nt12.15□□□□□ -0.46
SEN1Q00416 RPP2BYDR382W 333 nt12.13□□□□□ -0.47
SEN1Q00416 SPP1YPL138C 1062 nt12.12□□□□□ -0.47
SEN1Q00416 HUA1YGR268C 597 nt12.11□□□□□ -0.47
SEN1Q00416 YJR120WYJR120W 351 nt12.1□□□□□ -0.47
SEN1Q00416 PUN1YLR414C 792 nt12.05□□□□□ -0.48
SEN1Q00416 SAH1YER043C 1350 nt12.04□□□□□ -0.48
SEN1Q00416 LPX1YOR084W 1164 nt12.02□□□□□ -0.48
SEN1Q00416 ERV46YAL042W 1248 nt11.99□□□□□ -0.49
SEN1Q00416 LSM3YLR438C-A 270 nt11.99□□□□□ -0.49
SEN1Q00416 BDH2YAL061W 1254 nt11.96□□□□□ -0.49
SEN1Q00416 ARE1YCR048W 1833 nt11.9□□□□□ -0.5
SEN1Q00416 PAU16YKL224C 372 nt11.88□□□□□ -0.51
Retrieved 100 of 7,029 protein–RNA pairs in 11.4 ms