Protein–RNA interactions for Protein: P25046

ROX3, Mediator of RNA polymerase II transcription subunit 19, yeastyeast

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ROX3P25046 NSR1YGR159C 1245 nt16.85■□□□□ 0.29
ROX3P25046 YML009W-BYML009W-B 477 nt16.74■□□□□ 0.27
ROX3P25046 NOP1YDL014W 984 nt16.2■□□□□ 0.18
ROX3P25046 MDJ1YFL016C 1536 nt15.17■□□□□ 0.02
ROX3P25046 YKL036CYKL036C 393 nt14.73□□□□□ -0.05
ROX3P25046 SRX1YKL086W 384 nt14.14□□□□□ -0.15
ROX3P25046 Q0297Q0297 156 nt14.09□□□□□ -0.15
ROX3P25046 YJL027CYJL027C 417 nt14□□□□□ -0.17
ROX3P25046 YCR051WYCR051W 669 nt13.41□□□□□ -0.26
ROX3P25046 DBP2YNL112W 1641 nt13.31□□□□□ -0.28
ROX3P25046 SCS3YGL126W 1143 nt13.27□□□□□ -0.29
ROX3P25046 YBR190WYBR190W 312 nt13□□□□□ -0.33
ROX3P25046 TRN1tP(UGG)A 72 nt12.92□□□□□ -0.34
ROX3P25046 SUF9tP(UGG)F 72 nt12.92□□□□□ -0.34
ROX3P25046 SUF8tP(UGG)H 72 nt12.92□□□□□ -0.34
ROX3P25046 tP(UGG)LtP(UGG)L 72 nt12.92□□□□□ -0.34
ROX3P25046 SUF7tP(UGG)M 72 nt12.92□□□□□ -0.34
ROX3P25046 tP(UGG)N1tP(UGG)N1 72 nt12.92□□□□□ -0.34
ROX3P25046 tP(UGG)N2tP(UGG)N2 72 nt12.92□□□□□ -0.34
ROX3P25046 tP(UGG)O1tP(UGG)O1 72 nt12.92□□□□□ -0.34
ROX3P25046 SUF11tP(UGG)O2 72 nt12.92□□□□□ -0.34
ROX3P25046 CCC1YLR220W 969 nt12.79□□□□□ -0.36
ROX3P25046 YOL085CYOL085C 342 nt12.75□□□□□ -0.37
ROX3P25046 RTC3YHR087W 336 nt12.71□□□□□ -0.37
ROX3P25046 RPP1BYDL130W 321 nt12.65□□□□□ -0.38
ROX3P25046 PKP1YIL042C 1185 nt12.58□□□□□ -0.4
ROX3P25046 RVS167YDR388W 1449 nt12.5□□□□□ -0.41
ROX3P25046 SCJ1YMR214W 1134 nt12.36□□□□□ -0.43
ROX3P25046 tP(UGG)O3tP(UGG)O3 72 nt12.15□□□□□ -0.46
ROX3P25046 PET122YER153C 765 nt12.1□□□□□ -0.47
ROX3P25046 SHR5YOL110W 714 nt12□□□□□ -0.49
ROX3P25046 PUT4YOR348C 1884 nt11.96□□□□□ -0.49
ROX3P25046 SCR1SCR1 522 nt11.94□□□□□ -0.5
ROX3P25046 URN1YPR152C 1398 nt11.8□□□□□ -0.52
ROX3P25046 ATS1YAL020C 1002 nt11.8□□□□□ -0.52
ROX3P25046 YDJ1YNL064C 1230 nt11.76□□□□□ -0.53
ROX3P25046 RRN5YLR141W 1092 nt11.74□□□□□ -0.53
ROX3P25046 DEP1YAL013W 1218 nt11.73□□□□□ -0.53
ROX3P25046 OPI9YLR338W 858 nt11.68□□□□□ -0.54
ROX3P25046 SSA3YBL075C 1950 nt11.68□□□□□ -0.54
ROX3P25046 ARE1YCR048W 1833 nt11.67□□□□□ -0.54
ROX3P25046 SAH1YER043C 1350 nt11.66□□□□□ -0.54
ROX3P25046 RPN10YHR200W 807 nt11.6□□□□□ -0.55
ROX3P25046 POA1YBR022W 534 nt11.58□□□□□ -0.56
ROX3P25046 YHR049C-AYHR049C-A 297 nt11.54□□□□□ -0.56
ROX3P25046 YNL208WYNL208W 600 nt11.54□□□□□ -0.56
ROX3P25046 GAR1YHR089C 618 nt11.53□□□□□ -0.56
ROX3P25046 YER088W-BYER088W-B 147 nt11.5□□□□□ -0.57
ROX3P25046 RSB1YOR049C 1065 nt11.44□□□□□ -0.58
ROX3P25046 BSC6YOL137W 1494 nt11.38□□□□□ -0.59
ROX3P25046 PUN1YLR414C 792 nt11.35□□□□□ -0.59
ROX3P25046 BUD23YCR047C 828 nt11.26□□□□□ -0.61
ROX3P25046 YJR018WYJR018W 363 nt11.25□□□□□ -0.61
ROX3P25046 PTC2YER089C 1395 nt11.23□□□□□ -0.61
ROX3P25046 TIR1YER011W 765 nt11.15□□□□□ -0.62
ROX3P25046 NAB2YGL122C 1578 nt11.13□□□□□ -0.63
ROX3P25046 SSA1YAL005C 1929 nt11.05□□□□□ -0.64
ROX3P25046 YJR120WYJR120W 351 nt11.01□□□□□ -0.65
ROX3P25046 RPP2BYDR382W 333 nt10.98□□□□□ -0.65
ROX3P25046 PST2YDR032C 597 nt10.97□□□□□ -0.65
ROX3P25046 SPT5YML010W 3192 nt10.96□□□□□ -0.66
ROX3P25046 DAL1YIR027C 1383 nt10.93□□□□□ -0.66
ROX3P25046 FIS1YIL065C 468 nt10.93□□□□□ -0.66
ROX3P25046 FPR4YLR449W 1179 nt10.91□□□□□ -0.66
ROX3P25046 INM2YDR287W 879 nt10.89□□□□□ -0.67
ROX3P25046 PHO4YFR034C 939 nt10.83□□□□□ -0.68
ROX3P25046 SRB2YHR041C 633 nt10.81□□□□□ -0.68
ROX3P25046 YBL100CYBL100C 315 nt10.74□□□□□ -0.69
ROX3P25046 SSA4YER103W 1929 nt10.7□□□□□ -0.7
ROX3P25046 MEP2YNL142W 1500 nt10.7□□□□□ -0.7
ROX3P25046 BDH2YAL061W 1254 nt10.7□□□□□ -0.7
ROX3P25046 YPS1YLR120C 1710 nt10.7□□□□□ -0.7
ROX3P25046 WWM1YFL010C 636 nt10.62□□□□□ -0.71
ROX3P25046 YHR165W-AYHR165W-A 312 nt10.61□□□□□ -0.71
ROX3P25046 FUN26YAL022C 1554 nt10.6□□□□□ -0.71
ROX3P25046 YDR095CYDR095C 411 nt10.6□□□□□ -0.71
ROX3P25046 SHU1YHL006C 453 nt10.57□□□□□ -0.72
ROX3P25046 TRM9YML014W 840 nt10.55□□□□□ -0.72
ROX3P25046 LSM3YLR438C-A 270 nt10.52□□□□□ -0.73
ROX3P25046 DCW1YKL046C 1350 nt10.52□□□□□ -0.73
ROX3P25046 YGR021WYGR021W 873 nt10.51□□□□□ -0.73
ROX3P25046 ALF1YNL148C 765 nt10.51□□□□□ -0.73
ROX3P25046 YAL037C-BYAL037C-B 975 nt10.49□□□□□ -0.73
ROX3P25046 YFL021C-AYFL021C-A 855 nt10.47□□□□□ -0.73
ROX3P25046 CCT6YDR188W 1641 nt10.44□□□□□ -0.74
ROX3P25046 HOM6YJR139C 1080 nt10.44□□□□□ -0.74
ROX3P25046 YKL097CYKL097C 411 nt10.42□□□□□ -0.74
ROX3P25046 RPP2AYOL039W 321 nt10.41□□□□□ -0.74
ROX3P25046 EMI2YDR516C 1503 nt10.39□□□□□ -0.75
ROX3P25046 SUF2tP(AGG)C 72 nt10.39□□□□□ -0.75
ROX3P25046 SUF10tP(AGG)N 72 nt10.39□□□□□ -0.75
ROX3P25046 PTP1YDL230W 1008 nt10.37□□□□□ -0.75
ROX3P25046 YMR090WYMR090W 684 nt10.36□□□□□ -0.75
ROX3P25046 MNP1YGL068W 585 nt10.35□□□□□ -0.75
ROX3P25046 SIS1YNL007C 1059 nt10.34□□□□□ -0.75
ROX3P25046 CAC2YML102W 1407 nt10.33□□□□□ -0.76
ROX3P25046 YDL221WYDL221W 552 nt10.3□□□□□ -0.76
ROX3P25046 RKM5YLR137W 1104 nt10.28□□□□□ -0.76
ROX3P25046 BDF1YLR399C 2061 nt10.28□□□□□ -0.76
ROX3P25046 YBR220CYBR220C 1683 nt10.25□□□□□ -0.77
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms