RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	RKR1	Q04781	1562 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	SRX1	P36077	127 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	CYB5	P40312	120 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	SNN1	P48232	102 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	LTE1	P07866	1435 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	TY1B-JR2	P47100	1755 aa	Known RBP	0.62	□□□□□ -2.31
RLM1	YPL089C	TY1B-ER2	Q03619	1755 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	TY1B-MR1	Q04214	1755 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	TY1B-MR2	Q04670	1755 aa	Known RBP	0.62	□□□□□ -2.31
RLM1	YPL089C	TY1B-LR1	Q12088	1755 aa	Known RBP	0.62	□□□□□ -2.31
RLM1	YPL089C	TY1B-NL1	Q12112	1755 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	TY1B-GR1	Q12141	1755 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	TY1B-BL	Q12490	1755 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	NTE1	Q04958	1679 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	LHP1	P33399	275 aa	Known RBP	0.62	□□□□□ -2.31
RLM1	YPL089C	GTT1	P40582	234 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	SIN3	P22579	1536 aa		0.62	□□□□□ -2.31
RLM1	YPL089C	ESP1	Q03018	1630 aa		0.61	□□□□□ -2.31
RLM1	YPL089C	ICS3	P47034	131 aa		0.61	□□□□□ -2.31
RLM1	YPL089C	YLR363W-A	Q3E747	85 aa		0.61	□□□□□ -2.31
RLM1	YPL089C	DOP1	Q03921	1698 aa		0.61	□□□□□ -2.31
RLM1	YPL089C	SPP41	P38904	1435 aa		0.61	□□□□□ -2.31
RLM1	YPL089C	PDR15	Q04182	1529 aa	Known RBP	0.61	□□□□□ -2.31
RLM1	YPL089C	RPO21	P04050	1733 aa	Known RBP	0.6	□□□□□ -2.31
RLM1	YPL089C	PAU19	P0CE85	124 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	HMRA2	P0CY13	119 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	PAU3	P25610	124 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	OCA6	Q12454	224 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	YGL041C-B	Q3E750	60 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	TY4B-J	P47024	1803 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	SPO14	P36126	1683 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	GEA2	P39993	1459 aa	Known RBP	0.6	□□□□□ -2.31
RLM1	YPL089C	LAA1	P39526	2014 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	YGR164W	P53291	111 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	YGR240C-A	Q3E786	66 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	MMS1	Q06211	1407 aa		0.6	□□□□□ -2.31
RLM1	YPL089C	XRN1	P22147	1528 aa	Known RBP	0.59	□□□□□ -2.31
RLM1	YPL089C	SCC2	Q04002	1493 aa		0.59	□□□□□ -2.31
RLM1	YPL089C	USO1	P25386	1790 aa		0.59	□□□□□ -2.31
RLM1	YPL089C	LCL1	Q02786	101 aa		0.59	□□□□□ -2.31
RLM1	YPL089C	YMR321C	Q04898	105 aa		0.59	□□□□□ -2.31
RLM1	YPL089C	YOR034C-A	Q3E735	80 aa		0.59	□□□□□ -2.31
RLM1	YPL089C	DNF3	Q12674	1656 aa		0.59	□□□□□ -2.32
RLM1	YPL089C	YEA6	P39953	335 aa		0.59	□□□□□ -2.32
RLM1	YPL089C	YER137C	P40083	148 aa	Known RBP	0.59	□□□□□ -2.32
RLM1	YPL089C	HUR1	P45820	110 aa		0.59	□□□□□ -2.32
RLM1	YPL089C	YJR128W	P47162	119 aa		0.59	□□□□□ -2.32
RLM1	YPL089C	RPS12	P48589	143 aa	Known RBP	0.59	□□□□□ -2.32
RLM1	YPL089C	UFD4	P33202	1483 aa		0.58	□□□□□ -2.32
RLM1	YPL089C	GNA1	P43577	159 aa	Predicted RBP	0.58	□□□□□ -2.32
RLM1	YPL089C	MRPS12	P53732	153 aa		0.58	□□□□□ -2.32
RLM1	YPL089C	YMR103C	Q04436	120 aa		0.58	□□□□□ -2.32
RLM1	YPL089C	URA2	P07259	2214 aa	Known RBP	0.58	□□□□□ -2.32
RLM1	YPL089C	CHC1	P22137	1653 aa	Known RBP	0.58	□□□□□ -2.32
RLM1	YPL089C	RPL43A	P0CX25	92 aa	Known RBP	0.57	□□□□□ -2.32
RLM1	YPL089C	RPL43B	P0CX26	92 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	BUD23	P25627	275 aa	Predicted RBP	0.57	□□□□□ -2.32
RLM1	YPL089C	RGI1	P40043	161 aa	Predicted RBP	0.57	□□□□□ -2.32
RLM1	YPL089C	VMA21	P41806	77 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	VPS55	P47111	140 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	SWC7	Q06707	132 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	YLR307C-A	Q3E825	87 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	MIC10	Q96VH5	97 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	VPS15	P22219	1454 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	YPK9	Q12697	1472 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	ARO1	P08566	1588 aa	Known RBP	0.57	□□□□□ -2.32
RLM1	YPL089C	NUP170	P38181	1502 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	PAU16	P35994	123 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	PAU15	P40585	124 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	LSM6	Q06406	86 aa	Known RBP	0.57	□□□□□ -2.32
RLM1	YPL089C	YOS1	Q3E834	85 aa		0.57	□□□□□ -2.32
RLM1	YPL089C	GDB1	Q06625	1536 aa		0.56	□□□□□ -2.32
RLM1	YPL089C	YRF1-2	P40105	1681 aa		0.56	□□□□□ -2.32
RLM1	YPL089C	NUP159	P40477	1460 aa		0.56	□□□□□ -2.32
RLM1	YPL089C	YLR157W-E	P0CF00	54 aa		0.56	□□□□□ -2.32
RLM1	YPL089C	ULS1	Q08562	1619 aa		0.56	□□□□□ -2.32
RLM1	YPL089C	TSC11	P40061	1430 aa		0.56	□□□□□ -2.32
RLM1	YPL089C	LYS2	P07702	1392 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	YBR090C	P38253	122 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	YCL048W-A	Q2V2Q2	79 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	YRF1-3	P0CX14	1859 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	YRF1-7	P0CX15	1859 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	SKI3	P17883	1432 aa	Known RBP	0.55	□□□□□ -2.32
RLM1	YPL089C	PDR10	P51533	1564 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	MMS22	Q06164	1454 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	UBC4	P15731	148 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	UBC5	P15732	148 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	YCR101C	P25607	182 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	YMR090W	Q04304	227 aa	Known RBP	0.55	□□□□□ -2.32
RLM1	YPL089C	TY3B-G	Q99315	1547 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	MLP2	P40457	1679 aa		0.55	□□□□□ -2.32
RLM1	YPL089C	SEC16	P48415	2195 aa	Known RBP	0.54	□□□□□ -2.32
RLM1	YPL089C	VTH1	P40438	1549 aa		0.54	□□□□□ -2.32
RLM1	YPL089C	VTH2	P40890	1549 aa		0.54	□□□□□ -2.32
RLM1	YPL089C	PDR12	Q02785	1511 aa		0.54	□□□□□ -2.32
RLM1	YPL089C	NUP188	P52593	1655 aa	Known RBP	0.54	□□□□□ -2.32
RLM1	YPL089C	YHR138C	P38841	114 aa	Predicted RBP	0.54	□□□□□ -2.32
RLM1	YPL089C	YOL118C	Q08259	102 aa		0.54	□□□□□ -2.32
RLM1	YPL089C	TOP2	P06786	1428 aa	Known RBP	0.54	□□□□□ -2.32
RLM1	YPL089C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.54	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms