RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A YBR090CP38253 122 aa1.42□□□□□ -2.18
YNL054W-AYNL054W-A SEC7P11075 2009 aaKnown RBP1.42□□□□□ -2.18
YNL054W-AYNL054W-A UBC5P15732 148 aa1.41□□□□□ -2.18
YNL054W-AYNL054W-A IMP2P46972 177 aa1.41□□□□□ -2.18
YNL054W-AYNL054W-A FYV7Q12247 151 aa1.41□□□□□ -2.18
YNL054W-AYNL054W-A MDS3P53094 1487 aa1.41□□□□□ -2.18
YNL054W-AYNL054W-A SKI3P17883 1432 aaKnown RBP1.41□□□□□ -2.18
YNL054W-AYNL054W-A YLR419WQ06698 1435 aaKnown RBP1.41□□□□□ -2.18
YNL054W-AYNL054W-A KRE5P22023 1365 aa1.41□□□□□ -2.18
YNL054W-AYNL054W-A URB1P34241 1764 aaKnown RBP1.4□□□□□ -2.18
YNL054W-AYNL054W-A TCB3Q03640 1545 aaKnown RBP1.39□□□□□ -2.19
YNL054W-AYNL054W-A CCW14O13547 238 aa1.38□□□□□ -2.19
YNL054W-AYNL054W-A PAU5P43575 122 aa1.38□□□□□ -2.19
YNL054W-AYNL054W-A YPL038W-AQ3E7B4 63 aa1.38□□□□□ -2.19
YNL054W-AYNL054W-A YCR095W-AQ3E787 52 aa1.37□□□□□ -2.19
YNL054W-AYNL054W-A GCV3P39726 170 aaPredicted RBP1.36□□□□□ -2.19
YNL054W-AYNL054W-A RSM19P53733 91 aaPredicted RBP1.36□□□□□ -2.19
YNL054W-AYNL054W-A YRF1-6P53819 1859 aa1.35□□□□□ -2.19
YNL054W-AYNL054W-A YDR210WQ03482 75 aa1.35□□□□□ -2.19
YNL054W-AYNL054W-A YHR173CP38864 112 aa1.34□□□□□ -2.2
YNL054W-AYNL054W-A PDR11P40550 1411 aa1.33□□□□□ -2.2
YNL054W-AYNL054W-A SMC4Q12267 1418 aa1.33□□□□□ -2.2
YNL054W-AYNL054W-A SHU1P38751 150 aa1.33□□□□□ -2.2
YNL054W-AYNL054W-A YIL086CP40503 102 aa1.33□□□□□ -2.2
YNL054W-AYNL054W-A KSH1Q8TGJ3 72 aa1.33□□□□□ -2.2
YNL054W-AYNL054W-A TOP2P06786 1428 aaKnown RBP1.33□□□□□ -2.2
YNL054W-AYNL054W-A BUD4P47136 1447 aa1.33□□□□□ -2.2
YNL054W-AYNL054W-A PAU6P0CE90 120 aa1.32□□□□□ -2.2
YNL054W-AYNL054W-A PAU18P0CE91 120 aa1.32□□□□□ -2.2
YNL054W-AYNL054W-A SNA2P56508 79 aa1.31□□□□□ -2.2
YNL054W-AYNL054W-A MMS1Q06211 1407 aa1.31□□□□□ -2.2
YNL054W-AYNL054W-A TY3B-IQ7LHG5 1498 aaKnown RBP1.31□□□□□ -2.2
YNL054W-AYNL054W-A MIX14Q04341 121 aa1.3□□□□□ -2.2
YNL054W-AYNL054W-A YPL225WQ08971 146 aaKnown RBP1.3□□□□□ -2.2
YNL054W-AYNL054W-A BNI1P41832 1953 aa1.29□□□□□ -2.2
YNL054W-AYNL054W-A BRR2P32639 2163 aaKnown RBP1.29□□□□□ -2.2
YNL054W-AYNL054W-A YOR289WQ12012 251 aaPredicted RBP1.29□□□□□ -2.2
YNL054W-AYNL054W-A GEA1P47102 1408 aaPredicted RBP1.28□□□□□ -2.2
YNL054W-AYNL054W-A MYO4P32492 1471 aa1.28□□□□□ -2.2
YNL054W-AYNL054W-A ROX3P25046 220 aa1.28□□□□□ -2.2
YNL054W-AYNL054W-A MPC2P38857 129 aa1.28□□□□□ -2.2
YNL054W-AYNL054W-A YBR072C-AQ3E794 53 aa1.28□□□□□ -2.2
YNL054W-AYNL054W-A SNF2P22082 1703 aa1.27□□□□□ -2.21
YNL054W-AYNL054W-A TY4B-HP0C2J7 1802 aa1.27□□□□□ -2.21
YNL054W-AYNL054W-A COX12Q01519 83 aa1.27□□□□□ -2.21
YNL054W-AYNL054W-A PRP8P33334 2413 aaKnown RBP1.27□□□□□ -2.21
YNL054W-AYNL054W-A HMRA1P0CY11 126 aa1.26□□□□□ -2.21
YNL054W-AYNL054W-A MRX7P53869 86 aa1.26□□□□□ -2.21
YNL054W-AYNL054W-A ZEO1Q08245 113 aa1.26□□□□□ -2.21
YNL054W-AYNL054W-A YDR010CQ12426 110 aa1.26□□□□□ -2.21
YNL054W-AYNL054W-A YOL164W-AQ3E7A5 60 aa1.26□□□□□ -2.21
YNL054W-AYNL054W-A YKL068W-AQ3E826 78 aa1.26□□□□□ -2.21
YNL054W-AYNL054W-A YCL001W-BQ96VH2 84 aa1.26□□□□□ -2.21
YNL054W-AYNL054W-A XRN1P22147 1528 aaKnown RBP1.26□□□□□ -2.21
YNL054W-AYNL054W-A RRT15Q3E811 62 aa1.25□□□□□ -2.21
YNL054W-AYNL054W-A SRB8P25648 1427 aa1.25□□□□□ -2.21
YNL054W-AYNL054W-A UFD4P33202 1483 aa1.25□□□□□ -2.21
YNL054W-AYNL054W-A YBL071CP38185 102 aa1.24□□□□□ -2.21
YNL054W-AYNL054W-A SSN2P38931 1420 aa1.24□□□□□ -2.21
YNL054W-AYNL054W-A SPT6P23615 1451 aaKnown RBP1.24□□□□□ -2.21
YNL054W-AYNL054W-A GEA2P39993 1459 aaKnown RBP1.24□□□□□ -2.21
YNL054W-AYNL054W-A MMS22Q06164 1454 aa1.24□□□□□ -2.21
YNL054W-AYNL054W-A COX19Q3E731 98 aa1.23□□□□□ -2.21
YNL054W-AYNL054W-A YNR034W-AQ3E841 98 aa1.23□□□□□ -2.21
YNL054W-AYNL054W-A THO2P53552 1597 aaKnown RBP1.22□□□□□ -2.21
YNL054W-AYNL054W-A SCC2Q04002 1493 aa1.22□□□□□ -2.21
YNL054W-AYNL054W-A EMC5P40540 141 aa1.22□□□□□ -2.21
YNL054W-AYNL054W-A ICY1Q04329 127 aa1.22□□□□□ -2.21
YNL054W-AYNL054W-A IRC20Q06554 1556 aa1.22□□□□□ -2.21
YNL054W-AYNL054W-A RPO31P04051 1460 aa1.21□□□□□ -2.22
YNL054W-AYNL054W-A MRP17P28778 131 aa1.21□□□□□ -2.22
YNL054W-AYNL054W-A BLM10P43583 2143 aa1.21□□□□□ -2.22
YNL054W-AYNL054W-A NHP10Q03435 203 aa1.21□□□□□ -2.22
YNL054W-AYNL054W-A REV3P14284 1504 aa1.21□□□□□ -2.22
YNL054W-AYNL054W-A SIN3P22579 1536 aa1.21□□□□□ -2.22
YNL054W-AYNL054W-A MRPL38P35996 138 aaPredicted RBP1.2□□□□□ -2.22
YNL054W-AYNL054W-A YHL005CP38752 130 aa1.2□□□□□ -2.22
YNL054W-AYNL054W-A SPC1P46965 94 aa1.2□□□□□ -2.22
YNL054W-AYNL054W-A PAU20Q08322 120 aa1.2□□□□□ -2.22
YNL054W-AYNL054W-A PEP1P32319 1579 aa1.2□□□□□ -2.22
YNL054W-AYNL054W-A PDR10P51533 1564 aa1.2□□□□□ -2.22
YNL054W-AYNL054W-A NUP170P38181 1502 aa1.2□□□□□ -2.22
YNL054W-AYNL054W-A SWR1Q05471 1514 aa1.2□□□□□ -2.22
YNL054W-AYNL054W-A POL2P21951 2222 aaKnown RBP1.2□□□□□ -2.22
YNL054W-AYNL054W-A RPA12P32529 125 aaKnown RBP1.19□□□□□ -2.22
YNL054W-AYNL054W-A TY1B-DR4Q07793 1604 aa1.19□□□□□ -2.22
YNL054W-AYNL054W-A MYO1P08964 1928 aa1.19□□□□□ -2.22
YNL054W-AYNL054W-A SSK2P53599 1579 aa1.18□□□□□ -2.22
YNL054W-AYNL054W-A RPS11AP0CX47 156 aaKnown RBP1.18□□□□□ -2.22
YNL054W-AYNL054W-A RPS11BP0CX48 156 aaKnown RBP1.18□□□□□ -2.22
YNL054W-AYNL054W-A SWM2P40342 146 aa1.18□□□□□ -2.22
YNL054W-AYNL054W-A CAT8P39113 1433 aa1.18□□□□□ -2.22
YNL054W-AYNL054W-A MON2P48563 1636 aaPredicted RBP1.18□□□□□ -2.22
YNL054W-AYNL054W-A PDR5P33302 1511 aaKnown RBP1.17□□□□□ -2.22
YNL054W-AYNL054W-A PAU1P0CE88 120 aa1.17□□□□□ -2.22
YNL054W-AYNL054W-A PAU14P0CE89 120 aa1.17□□□□□ -2.22
YNL054W-AYNL054W-A PAU8P0CE92 120 aa1.17□□□□□ -2.22
YNL054W-AYNL054W-A PAU11P0CE93 120 aa1.17□□□□□ -2.22
YNL054W-AYNL054W-A SSS1P35179 80 aa1.17□□□□□ -2.22
YNL054W-AYNL054W-A PAU13P38725 120 aa1.17□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms