RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A DRS1P32892 752 aaKnown RBP12.95□□□□□ -0.34
YNL054W-AYNL054W-A MTC1P47018 478 aaKnown RBP12.48□□□□□ -0.41
YNL054W-AYNL054W-A BFR2Q06631 534 aaKnown RBP11.4□□□□□ -0.58
YNL054W-AYNL054W-A FAP1P53971 965 aa11.24□□□□□ -0.61
YNL054W-AYNL054W-A TFA1P36100 482 aa11.14□□□□□ -0.63
YNL054W-AYNL054W-A AVT3P36062 692 aa10.94□□□□□ -0.66
YNL054W-AYNL054W-A DIP2Q12220 943 aaPredicted RBP10.88□□□□□ -0.67
YNL054W-AYNL054W-A PRY3P47033 881 aa10.61□□□□□ -0.71
YNL054W-AYNL054W-A RSE1Q04693 1361 aaKnown RBP10.14□□□□□ -0.79
YNL054W-AYNL054W-A AAD16Q02895 342 aa10.07□□□□□ -0.8
YNL054W-AYNL054W-A YCK3P39962 524 aa10.01□□□□□ -0.81
YNL054W-AYNL054W-A PRI1P10363 409 aa9.99□□□□□ -0.81
YNL054W-AYNL054W-A ISW2Q08773 1120 aa9.99□□□□□ -0.81
YNL054W-AYNL054W-A HAA1Q12753 694 aaKnown RBP9.94□□□□□ -0.82
YNL054W-AYNL054W-A RPG1P38249 964 aaKnown RBP9.86□□□□□ -0.83
YNL054W-AYNL054W-A RQC2Q12532 1038 aaKnown RBP9.8□□□□□ -0.84
YNL054W-AYNL054W-A RPL17AP05740 184 aaKnown RBP9.73□□□□□ -0.85
YNL054W-AYNL054W-A RPL17BP46990 184 aaKnown RBP9.73□□□□□ -0.85
YNL054W-AYNL054W-A REB1P21538 810 aa9.51□□□□□ -0.89
YNL054W-AYNL054W-A SPT21P35209 758 aa9.5□□□□□ -0.89
YNL054W-AYNL054W-A RIM101P33400 625 aa9.46□□□□□ -0.9
YNL054W-AYNL054W-A TSR3Q12094 313 aaKnown RBP9.33□□□□□ -0.92
YNL054W-AYNL054W-A PTP3P40048 928 aa9.31□□□□□ -0.92
YNL054W-AYNL054W-A DMA1P38823 416 aa9.31□□□□□ -0.92
YNL054W-AYNL054W-A SSP1P38871 571 aa9.2□□□□□ -0.94
YNL054W-AYNL054W-A OXP1P28273 1286 aa9.19□□□□□ -0.94
YNL054W-AYNL054W-A YKR023WP36119 530 aaKnown RBP9.07□□□□□ -0.96
YNL054W-AYNL054W-A MRPL32P25348 183 aa9.01□□□□□ -0.97
YNL054W-AYNL054W-A YLR271WQ06152 274 aa9□□□□□ -0.97
YNL054W-AYNL054W-A YAH1Q12184 172 aaKnown RBP9□□□□□ -0.97
YNL054W-AYNL054W-A YGL015CP33199 130 aa8.98□□□□□ -0.97
YNL054W-AYNL054W-A ARP8Q12386 881 aaKnown RBP RIP-Chip data8.96□□□□□ -0.98not detected
YNL054W-AYNL054W-A YIL055CP40523 627 aaKnown RBP8.93□□□□□ -0.98
YNL054W-AYNL054W-A TFC8Q12308 588 aa8.87□□□□□ -0.99
YNL054W-AYNL054W-A RSM7P47150 247 aa8.86□□□□□ -0.99
YNL054W-AYNL054W-A HOP09932 586 aa8.82□□□□□ -1
YNL054W-AYNL054W-A MGA2P40578 1113 aa8.82□□□□□ -1
YNL054W-AYNL054W-A BUD31P25337 157 aaPredicted RBP8.77□□□□□ -1.01
YNL054W-AYNL054W-A TAF7Q05021 590 aa8.76□□□□□ -1.01
YNL054W-AYNL054W-A SAS10Q12136 610 aaPredicted RBP8.76□□□□□ -1.01
YNL054W-AYNL054W-A CDC27P38042 758 aa8.75□□□□□ -1.01
YNL054W-AYNL054W-A DCD1P06773 312 aa8.74□□□□□ -1.01
YNL054W-AYNL054W-A LEO1P38439 464 aa8.74□□□□□ -1.01
YNL054W-AYNL054W-A CST9Q06032 482 aa8.74□□□□□ -1.01
YNL054W-AYNL054W-A PSD2P53037 1138 aaKnown RBP8.73□□□□□ -1.01
YNL054W-AYNL054W-A AI2P03876 854 aa8.66□□□□□ -1.02
YNL054W-AYNL054W-A BCH2P36122 765 aa8.62□□□□□ -1.03
YNL054W-AYNL054W-A LEU3P08638 886 aa8.6□□□□□ -1.03
YNL054W-AYNL054W-A BBC1P47068 1157 aa8.53□□□□□ -1.04
YNL054W-AYNL054W-A RAM2P29703 316 aa8.51□□□□□ -1.05
YNL054W-AYNL054W-A EPS1P40557 701 aa8.5□□□□□ -1.05
YNL054W-AYNL054W-A BDF1P35817 686 aa8.43□□□□□ -1.06
YNL054W-AYNL054W-A MRM1P25270 412 aa8.41□□□□□ -1.06
YNL054W-AYNL054W-A RCR1P38212 213 aa8.41□□□□□ -1.06
YNL054W-AYNL054W-A YPR148CQ06523 435 aa8.39□□□□□ -1.07
YNL054W-AYNL054W-A SET1P38827 1080 aaKnown RBP8.38□□□□□ -1.07
YNL054W-AYNL054W-A SCY1P53009 804 aa8.34□□□□□ -1.07
YNL054W-AYNL054W-A RTG3P38165 486 aa8.32□□□□□ -1.08
YNL054W-AYNL054W-A UBP10P53874 792 aaPredicted RBP8.3□□□□□ -1.08
YNL054W-AYNL054W-A MAK11P20484 414 aaKnown RBP8.29□□□□□ -1.08
YNL054W-AYNL054W-A MAP2P38174 421 aaKnown RBP8.29□□□□□ -1.08
YNL054W-AYNL054W-A RPN1P38764 993 aaKnown RBP8.29□□□□□ -1.08
YNL054W-AYNL054W-A CKB1P43639 278 aa8.29□□□□□ -1.08
YNL054W-AYNL054W-A IFH1P39520 1085 aa8.28□□□□□ -1.08
YNL054W-AYNL054W-A VPS70P47161 811 aa8.28□□□□□ -1.08
YNL054W-AYNL054W-A VPS29P38759 282 aa8.27□□□□□ -1.09
YNL054W-AYNL054W-A SPB4P25808 606 aaPredicted RBP8.22□□□□□ -1.09
YNL054W-AYNL054W-A SIS1P25294 352 aaKnown RBP8.21□□□□□ -1.1
YNL054W-AYNL054W-A COQ8P27697 501 aa8.18□□□□□ -1.1
YNL054W-AYNL054W-A DSF2P38213 736 aa8.17□□□□□ -1.1
YNL054W-AYNL054W-A NOP53Q12080 455 aaKnown RBP8.16□□□□□ -1.1
YNL054W-AYNL054W-A SLX5P32828 619 aaKnown RBP8.15□□□□□ -1.1
YNL054W-AYNL054W-A DMA2P53924 522 aa8.14□□□□□ -1.11
YNL054W-AYNL054W-A STS1P38637 319 aa8.12□□□□□ -1.11
YNL054W-AYNL054W-A YMR1P47147 688 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
YNL054W-AYNL054W-A EDS1P38073 919 aa8.11□□□□□ -1.11
YNL054W-AYNL054W-A PBS2P08018 668 aa8.1□□□□□ -1.11
YNL054W-AYNL054W-A UBP9P39967 754 aa8.06□□□□□ -1.12
YNL054W-AYNL054W-A DBP1P24784 617 aaKnown RBP8.05□□□□□ -1.12
YNL054W-AYNL054W-A YNR021WP53723 404 aaKnown RBP8.05□□□□□ -1.12
YNL054W-AYNL054W-A MIF2P35201 549 aa8.03□□□□□ -1.12
YNL054W-AYNL054W-A REF2P42073 533 aaPredicted RBP8.03□□□□□ -1.12
YNL054W-AYNL054W-A YFR006WP43590 535 aa8.03□□□□□ -1.12
YNL054W-AYNL054W-A ABP1P15891 592 aaKnown RBP8.01□□□□□ -1.13
YNL054W-AYNL054W-A NSR1P27476 414 aaKnown RBP RIP-Chip data8.01□□□□□ -1.13not detected
YNL054W-AYNL054W-A YOR238WQ08634 303 aa8□□□□□ -1.13
YNL054W-AYNL054W-A PTC3P34221 468 aaKnown RBP7.99□□□□□ -1.13
YNL054W-AYNL054W-A MAM3Q12296 706 aa7.99□□□□□ -1.13
YNL054W-AYNL054W-A KIN1P13185 1064 aa7.98□□□□□ -1.13
YNL054W-AYNL054W-A NUP42P49686 430 aaKnown RBP7.98□□□□□ -1.13
YNL054W-AYNL054W-A TIF4632P39936 914 aaKnown RBP7.96□□□□□ -1.14
YNL054W-AYNL054W-A IES2P40154 320 aa7.96□□□□□ -1.14
YNL054W-AYNL054W-A AIM7Q12156 149 aa7.96□□□□□ -1.14
YNL054W-AYNL054W-A DIT2P21595 489 aa7.95□□□□□ -1.14
YNL054W-AYNL054W-A MAK21Q12176 1025 aaKnown RBP7.95□□□□□ -1.14
YNL054W-AYNL054W-A COX6P00427 148 aa7.94□□□□□ -1.14
YNL054W-AYNL054W-A GLC3P32775 704 aa7.94□□□□□ -1.14
YNL054W-AYNL054W-A TGL3P40308 642 aa7.94□□□□□ -1.14
YNL054W-AYNL054W-A YAP5P40574 245 aa7.89□□□□□ -1.15
YNL054W-AYNL054W-A RLF2Q12495 606 aa7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 323.7 ms