Protein–RNA interactions for Protein: P0CX47

RPS11A, 40S ribosomal protein S11-A, yeastyeast

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS11AP0CX47 NSR1YGR159C 1245 nt15.28■□□□□ 0.04
RPS11AP0CX47 YML009W-BYML009W-B 477 nt15.26■□□□□ 0.03
RPS11AP0CX47 NOP1YDL014W 984 nt14.86□□□□□ -0.03
RPS11AP0CX47 MDJ1YFL016C 1536 nt13.59□□□□□ -0.23
RPS11AP0CX47 YKL036CYKL036C 393 nt13.58□□□□□ -0.24
RPS11AP0CX47 Q0297Q0297 156 nt12.93□□□□□ -0.34
RPS11AP0CX47 SRX1YKL086W 384 nt12.93□□□□□ -0.34
RPS11AP0CX47 YJL027CYJL027C 417 nt12.65□□□□□ -0.38
RPS11AP0CX47 YCR051WYCR051W 669 nt12.26□□□□□ -0.45
RPS11AP0CX47 SCS3YGL126W 1143 nt12.26□□□□□ -0.45
RPS11AP0CX47 DBP2YNL112W 1641 nt11.95□□□□□ -0.5
RPS11AP0CX47 TRN1tP(UGG)A 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 SUF9tP(UGG)F 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 SUF8tP(UGG)H 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 tP(UGG)LtP(UGG)L 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 SUF7tP(UGG)M 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 tP(UGG)N1tP(UGG)N1 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 tP(UGG)N2tP(UGG)N2 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 tP(UGG)O1tP(UGG)O1 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 SUF11tP(UGG)O2 72 nt11.73□□□□□ -0.53
RPS11AP0CX47 YOL085CYOL085C 342 nt11.73□□□□□ -0.53
RPS11AP0CX47 YBR190WYBR190W 312 nt11.67□□□□□ -0.54
RPS11AP0CX47 CCC1YLR220W 969 nt11.61□□□□□ -0.55
RPS11AP0CX47 RPP1BYDL130W 321 nt11.6□□□□□ -0.55
RPS11AP0CX47 PKP1YIL042C 1185 nt11.53□□□□□ -0.56
RPS11AP0CX47 RTC3YHR087W 336 nt11.41□□□□□ -0.58
RPS11AP0CX47 RVS167YDR388W 1449 nt11.35□□□□□ -0.59
RPS11AP0CX47 SCJ1YMR214W 1134 nt11.15□□□□□ -0.62
RPS11AP0CX47 PET122YER153C 765 nt11.06□□□□□ -0.64
RPS11AP0CX47 tP(UGG)O3tP(UGG)O3 72 nt11.06□□□□□ -0.64
RPS11AP0CX47 SCR1SCR1 522 nt10.99□□□□□ -0.65
RPS11AP0CX47 ATS1YAL020C 1002 nt10.94□□□□□ -0.66
RPS11AP0CX47 SHR5YOL110W 714 nt10.89□□□□□ -0.67
RPS11AP0CX47 YDJ1YNL064C 1230 nt10.74□□□□□ -0.69
RPS11AP0CX47 RRN5YLR141W 1092 nt10.73□□□□□ -0.69
RPS11AP0CX47 URN1YPR152C 1398 nt10.63□□□□□ -0.71
RPS11AP0CX47 PUT4YOR348C 1884 nt10.6□□□□□ -0.71
RPS11AP0CX47 DEP1YAL013W 1218 nt10.56□□□□□ -0.72
RPS11AP0CX47 RPN10YHR200W 807 nt10.53□□□□□ -0.72
RPS11AP0CX47 YER088W-BYER088W-B 147 nt10.51□□□□□ -0.73
RPS11AP0CX47 RSB1YOR049C 1065 nt10.51□□□□□ -0.73
RPS11AP0CX47 OPI9YLR338W 858 nt10.5□□□□□ -0.73
RPS11AP0CX47 GAR1YHR089C 618 nt10.47□□□□□ -0.73
RPS11AP0CX47 YNL208WYNL208W 600 nt10.44□□□□□ -0.74
RPS11AP0CX47 SAH1YER043C 1350 nt10.42□□□□□ -0.74
RPS11AP0CX47 ARE1YCR048W 1833 nt10.37□□□□□ -0.75
RPS11AP0CX47 YHR049C-AYHR049C-A 297 nt10.28□□□□□ -0.76
RPS11AP0CX47 POA1YBR022W 534 nt10.28□□□□□ -0.76
RPS11AP0CX47 PUN1YLR414C 792 nt10.23□□□□□ -0.77
RPS11AP0CX47 SSA3YBL075C 1950 nt10.19□□□□□ -0.78
RPS11AP0CX47 TIR1YER011W 765 nt10.15□□□□□ -0.78
RPS11AP0CX47 PST2YDR032C 597 nt10.14□□□□□ -0.79
RPS11AP0CX47 YJR018WYJR018W 363 nt10.14□□□□□ -0.79
RPS11AP0CX47 BSC6YOL137W 1494 nt10.09□□□□□ -0.79
RPS11AP0CX47 PTC2YER089C 1395 nt10.07□□□□□ -0.8
RPS11AP0CX47 BUD23YCR047C 828 nt10.05□□□□□ -0.8
RPS11AP0CX47 SSA1YAL005C 1929 nt9.99□□□□□ -0.81
RPS11AP0CX47 NAB2YGL122C 1578 nt9.98□□□□□ -0.81
RPS11AP0CX47 RPP2BYDR382W 333 nt9.96□□□□□ -0.82
RPS11AP0CX47 YJR120WYJR120W 351 nt9.88□□□□□ -0.83
RPS11AP0CX47 INM2YDR287W 879 nt9.83□□□□□ -0.84
RPS11AP0CX47 DAL1YIR027C 1383 nt9.82□□□□□ -0.84
RPS11AP0CX47 FPR4YLR449W 1179 nt9.8□□□□□ -0.84
RPS11AP0CX47 FIS1YIL065C 468 nt9.78□□□□□ -0.84
RPS11AP0CX47 SHU1YHL006C 453 nt9.74□□□□□ -0.85
RPS11AP0CX47 SRB2YHR041C 633 nt9.74□□□□□ -0.85
RPS11AP0CX47 YKL097CYKL097C 411 nt9.73□□□□□ -0.85
RPS11AP0CX47 PHO4YFR034C 939 nt9.72□□□□□ -0.85
RPS11AP0CX47 BDH2YAL061W 1254 nt9.71□□□□□ -0.86
RPS11AP0CX47 YBL100CYBL100C 315 nt9.69□□□□□ -0.86
RPS11AP0CX47 SPT5YML010W 3192 nt9.66□□□□□ -0.86
RPS11AP0CX47 WWM1YFL010C 636 nt9.65□□□□□ -0.86
RPS11AP0CX47 YGR021WYGR021W 873 nt9.65□□□□□ -0.86
RPS11AP0CX47 YAL037C-BYAL037C-B 975 nt9.59□□□□□ -0.87
RPS11AP0CX47 LSM3YLR438C-A 270 nt9.58□□□□□ -0.88
RPS11AP0CX47 FUN26YAL022C 1554 nt9.56□□□□□ -0.88
RPS11AP0CX47 YFL021C-AYFL021C-A 855 nt9.56□□□□□ -0.88
RPS11AP0CX47 TRM9YML014W 840 nt9.55□□□□□ -0.88
RPS11AP0CX47 YPS1YLR120C 1710 nt9.54□□□□□ -0.88
RPS11AP0CX47 HOM6YJR139C 1080 nt9.54□□□□□ -0.88
RPS11AP0CX47 YDR095CYDR095C 411 nt9.49□□□□□ -0.89
RPS11AP0CX47 YHR165W-AYHR165W-A 312 nt9.49□□□□□ -0.89
RPS11AP0CX47 ALF1YNL148C 765 nt9.49□□□□□ -0.89
RPS11AP0CX47 MEP2YNL142W 1500 nt9.48□□□□□ -0.89
RPS11AP0CX47 MNP1YGL068W 585 nt9.45□□□□□ -0.9
RPS11AP0CX47 CCT6YDR188W 1641 nt9.44□□□□□ -0.9
RPS11AP0CX47 SUF2tP(AGG)C 72 nt9.42□□□□□ -0.9
RPS11AP0CX47 SUF10tP(AGG)N 72 nt9.42□□□□□ -0.9
RPS11AP0CX47 RKM5YLR137W 1104 nt9.41□□□□□ -0.9
RPS11AP0CX47 SSA4YER103W 1929 nt9.36□□□□□ -0.91
RPS11AP0CX47 YOL037CYOL037C 354 nt9.34□□□□□ -0.91
RPS11AP0CX47 RPP2AYOL039W 321 nt9.32□□□□□ -0.92
RPS11AP0CX47 NPL3YDR432W 1245 nt9.31□□□□□ -0.92
RPS11AP0CX47 SIS1YNL007C 1059 nt9.3□□□□□ -0.92
RPS11AP0CX47 YOR139CYOR139C 393 nt9.29□□□□□ -0.92
RPS11AP0CX47 DCW1YKL046C 1350 nt9.28□□□□□ -0.92
RPS11AP0CX47 YMR090WYMR090W 684 nt9.24□□□□□ -0.93
RPS11AP0CX47 PTP1YDL230W 1008 nt9.23□□□□□ -0.93
RPS11AP0CX47 EMI2YDR516C 1503 nt9.21□□□□□ -0.93
RPS11AP0CX47 CAC2YML102W 1407 nt9.15□□□□□ -0.94
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms