RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	MIC10	Q96VH5	97 aa		1.38	□□□□□ -2.19
RSA3	YLR221C	YCR101C	P25607	182 aa		1.37	□□□□□ -2.19
RSA3	YLR221C	SHU1	P38751	150 aa		1.36	□□□□□ -2.19
RSA3	YLR221C	YMR090W	Q04304	227 aa	Known RBP	1.36	□□□□□ -2.19
RSA3	YLR221C	URA2	P07259	2214 aa	Known RBP	1.36	□□□□□ -2.19
RSA3	YLR221C	MDS3	P53094	1487 aa		1.36	□□□□□ -2.19
RSA3	YLR221C	YLR255C	O13574	117 aa		1.35	□□□□□ -2.19
RSA3	YLR221C	GCV3	P39726	170 aa	Predicted RBP	1.35	□□□□□ -2.19
RSA3	YLR221C	YPL038W-A	Q3E7B4	63 aa		1.35	□□□□□ -2.19
RSA3	YLR221C	SEC16	P48415	2195 aa	Known RBP	1.34	□□□□□ -2.19
RSA3	YLR221C	TSC11	P40061	1430 aa		1.34	□□□□□ -2.19
RSA3	YLR221C	KOG1	P38873	1557 aa		1.34	□□□□□ -2.2
RSA3	YLR221C	UBC4	P15731	148 aa		1.32	□□□□□ -2.2
RSA3	YLR221C	RGI1	P40043	161 aa	Predicted RBP	1.32	□□□□□ -2.2
RSA3	YLR221C	COX19	Q3E731	98 aa		1.32	□□□□□ -2.2
RSA3	YLR221C	YBR090C	P38253	122 aa		1.31	□□□□□ -2.2
RSA3	YLR221C	YDR210W	Q03482	75 aa		1.31	□□□□□ -2.2
RSA3	YLR221C	TOP2	P06786	1428 aa	Known RBP	1.31	□□□□□ -2.2
RSA3	YLR221C	RPS29B	P41058	56 aa	Known RBP	1.3	□□□□□ -2.2
RSA3	YLR221C	COX12	Q01519	83 aa		1.29	□□□□□ -2.2
RSA3	YLR221C	KRE5	P22023	1365 aa		1.29	□□□□□ -2.2
RSA3	YLR221C	SWR1	Q05471	1514 aa		1.29	□□□□□ -2.2
RSA3	YLR221C	UBC5	P15732	148 aa		1.28	□□□□□ -2.2
RSA3	YLR221C	MPC2	P38857	129 aa		1.28	□□□□□ -2.2
RSA3	YLR221C	URB1	P34241	1764 aa	Known RBP	1.27	□□□□□ -2.21
RSA3	YLR221C	YCR095W-A	Q3E787	52 aa		1.27	□□□□□ -2.21
RSA3	YLR221C	YOL164W-A	Q3E7A5	60 aa		1.27	□□□□□ -2.21
RSA3	YLR221C	YRF1-6	P53819	1859 aa		1.25	□□□□□ -2.21
RSA3	YLR221C	SNA2	P56508	79 aa		1.24	□□□□□ -2.21
RSA3	YLR221C	TY3B-I	Q7LHG5	1498 aa	Known RBP	1.24	□□□□□ -2.21
RSA3	YLR221C	MIX14	Q04341	121 aa		1.23	□□□□□ -2.21
RSA3	YLR221C	GEA1	P47102	1408 aa	Predicted RBP	1.22	□□□□□ -2.21
RSA3	YLR221C	SNF2	P22082	1703 aa		1.21	□□□□□ -2.22
RSA3	YLR221C	MRX7	P53869	86 aa		1.21	□□□□□ -2.22
RSA3	YLR221C	SRB8	P25648	1427 aa		1.21	□□□□□ -2.22
RSA3	YLR221C	SEC7	P11075	2009 aa	Known RBP	1.2	□□□□□ -2.22
RSA3	YLR221C	PAU5	P43575	122 aa		1.19	□□□□□ -2.22
RSA3	YLR221C	TY4B-H	P0C2J7	1802 aa		1.19	□□□□□ -2.22
RSA3	YLR221C	PDR11	P40550	1411 aa		1.18	□□□□□ -2.22
RSA3	YLR221C	MRP17	P28778	131 aa		1.18	□□□□□ -2.22
RSA3	YLR221C	RSM19	P53733	91 aa	Predicted RBP	1.18	□□□□□ -2.22
RSA3	YLR221C	YOR289W	Q12012	251 aa	Predicted RBP	1.18	□□□□□ -2.22
RSA3	YLR221C	FYV7	Q12247	151 aa		1.18	□□□□□ -2.22
RSA3	YLR221C	REV3	P14284	1504 aa		1.18	□□□□□ -2.22
RSA3	YLR221C	ROX3	P25046	220 aa		1.16	□□□□□ -2.22
RSA3	YLR221C	ICY1	Q04329	127 aa		1.16	□□□□□ -2.22
RSA3	YLR221C	MMS1	Q06211	1407 aa		1.15	□□□□□ -2.23
RSA3	YLR221C	PAU6	P0CE90	120 aa		1.14	□□□□□ -2.23
RSA3	YLR221C	PAU18	P0CE91	120 aa		1.14	□□□□□ -2.23
RSA3	YLR221C	RPS11A	P0CX47	156 aa	Known RBP	1.14	□□□□□ -2.23
RSA3	YLR221C	RPS11B	P0CX48	156 aa	Known RBP	1.14	□□□□□ -2.23
RSA3	YLR221C	RPA12	P32529	125 aa	Known RBP	1.14	□□□□□ -2.23
RSA3	YLR221C	KSH1	Q8TGJ3	72 aa		1.14	□□□□□ -2.23
RSA3	YLR221C	SSN2	P38931	1420 aa		1.14	□□□□□ -2.23
RSA3	YLR221C	MRPL38	P35996	138 aa	Predicted RBP	1.13	□□□□□ -2.23
RSA3	YLR221C	YBR292C	P38357	123 aa		1.13	□□□□□ -2.23
RSA3	YLR221C	SKI3	P17883	1432 aa	Known RBP	1.13	□□□□□ -2.23
RSA3	YLR221C	BPT1	P14772	1559 aa		1.13	□□□□□ -2.23
RSA3	YLR221C	IRC20	Q06554	1556 aa		1.13	□□□□□ -2.23
RSA3	YLR221C	GEA2	P39993	1459 aa	Known RBP	1.12	□□□□□ -2.23
RSA3	YLR221C	YHL005C	P38752	130 aa		1.12	□□□□□ -2.23
RSA3	YLR221C	PAU20	Q08322	120 aa		1.12	□□□□□ -2.23
RSA3	YLR221C	LTE1	P07866	1435 aa		1.12	□□□□□ -2.23
RSA3	YLR221C	BUD4	P47136	1447 aa		1.12	□□□□□ -2.23
RSA3	YLR221C	DNF1	P32660	1571 aa		1.12	□□□□□ -2.23
RSA3	YLR221C	BNI1	P41832	1953 aa		1.11	□□□□□ -2.23
RSA3	YLR221C	YPL225W	Q08971	146 aa	Known RBP	1.11	□□□□□ -2.23
RSA3	YLR221C	TY1B-DR4	Q07793	1604 aa		1.11	□□□□□ -2.23
RSA3	YLR221C	TCB3	Q03640	1545 aa	Known RBP	1.1	□□□□□ -2.23
RSA3	YLR221C	YBL071C	P38185	102 aa		1.1	□□□□□ -2.23
RSA3	YLR221C	RPA190	P10964	1664 aa	Known RBP	1.1	□□□□□ -2.23
RSA3	YLR221C	YCF1	P39109	1515 aa	Known RBP	1.1	□□□□□ -2.23
RSA3	YLR221C	CDC25	P04821	1589 aa		1.09	□□□□□ -2.23
RSA3	YLR221C	HIR3	P47171	1648 aa		1.09	□□□□□ -2.23
RSA3	YLR221C	YOR093C	Q12275	1648 aa		1.09	□□□□□ -2.23
RSA3	YLR221C	EMC5	P40540	141 aa		1.09	□□□□□ -2.23
RSA3	YLR221C	YNR034W-A	Q3E841	98 aa		1.09	□□□□□ -2.23
RSA3	YLR221C	RPO31	P04051	1460 aa		1.08	□□□□□ -2.24
RSA3	YLR221C	AIM19	P40502	157 aa		1.08	□□□□□ -2.24
RSA3	YLR221C	YCL001W-B	Q96VH2	84 aa		1.08	□□□□□ -2.24
RSA3	YLR221C	THO2	P53552	1597 aa	Known RBP	1.08	□□□□□ -2.24
RSA3	YLR221C	ESC1	Q03661	1658 aa	Known RBP	1.07	□□□□□ -2.24
RSA3	YLR221C	SPT6	P23615	1451 aa	Known RBP	1.07	□□□□□ -2.24
RSA3	YLR221C	PEP1	P32319	1579 aa		1.07	□□□□□ -2.24
RSA3	YLR221C	DNF2	Q12675	1612 aa		1.07	□□□□□ -2.24
RSA3	YLR221C	BRR2	P32639	2163 aa	Known RBP	1.06	□□□□□ -2.24
RSA3	YLR221C	ZEO1	Q08245	113 aa		1.06	□□□□□ -2.24
RSA3	YLR221C	CAT8	P39113	1433 aa		1.06	□□□□□ -2.24
RSA3	YLR221C	HMRA1	P0CY11	126 aa		1.05	□□□□□ -2.24
RSA3	YLR221C	BLM10	P43583	2143 aa		1.05	□□□□□ -2.24
RSA3	YLR221C	SSK2	P53599	1579 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	PAU1	P0CE88	120 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	PAU14	P0CE89	120 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	PAU8	P0CE92	120 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	PAU11	P0CE93	120 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	PAU13	P38725	120 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	PAU10	Q03050	120 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	PAU9	Q3E770	120 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	SIN3	P22579	1536 aa		1.04	□□□□□ -2.24
RSA3	YLR221C	RSM18	P40033	138 aa		1.03	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms