RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C RBL2P48606 106 aaKnown RBP2.06□□□□□ -2.08
RRP42YDL111C THG1P53215 237 aaKnown RBP2.06□□□□□ -2.08
RRP42YDL111C PIR1Q03178 341 aa2.06□□□□□ -2.08
RRP42YDL111C SPT6P23615 1451 aaKnown RBP2.06□□□□□ -2.08
RRP42YDL111C MDM35O60200 86 aa2.05□□□□□ -2.08
RRP42YDL111C PTC1P35182 281 aa2.05□□□□□ -2.08
RRP42YDL111C YEL028WP39989 153 aa2.05□□□□□ -2.08
RRP42YDL111C YER181CP40097 107 aa2.05□□□□□ -2.08
RRP42YDL111C PAC10P48363 199 aa2.05□□□□□ -2.08
RRP42YDL111C DML1Q03652 475 aa2.05□□□□□ -2.08
RRP42YDL111C YDR102CQ03864 110 aa2.05□□□□□ -2.08
RRP42YDL111C YDR391CQ04170 232 aa2.05□□□□□ -2.08
RRP42YDL111C YHR007C-AQ07074 71 aa2.05□□□□□ -2.08
RRP42YDL111C PEP1P32319 1579 aa2.05□□□□□ -2.08
RRP42YDL111C COX8P04039 78 aa2.04□□□□□ -2.08
RRP42YDL111C TAF2P23255 1407 aa2.04□□□□□ -2.08
RRP42YDL111C YHL018WP38744 120 aaPredicted RBP2.04□□□□□ -2.08
RRP42YDL111C HTD2P38790 280 aaKnown RBP2.04□□□□□ -2.08
RRP42YDL111C FLO9P39712 1322 aa2.04□□□□□ -2.08
RRP42YDL111C RIM9Q04734 239 aa2.04□□□□□ -2.08
RRP42YDL111C MON2P48563 1636 aaPredicted RBP2.03□□□□□ -2.08
RRP42YDL111C YPK9Q12697 1472 aa2.03□□□□□ -2.08
RRP42YDL111C MAK31P23059 88 aa2.03□□□□□ -2.08
RRP42YDL111C YKR045CP36138 183 aa2.03□□□□□ -2.08
RRP42YDL111C NSE4P43124 402 aa2.03□□□□□ -2.08
RRP42YDL111C ALB1P47019 175 aaPredicted RBP2.03□□□□□ -2.08
RRP42YDL111C YJR015WP47090 510 aa2.03□□□□□ -2.08
RRP42YDL111C LIP1Q03579 150 aa2.03□□□□□ -2.08
RRP42YDL111C YHP1Q04116 353 aa2.03□□□□□ -2.08
RRP42YDL111C SPC2Q04969 178 aa2.03□□□□□ -2.08
RRP42YDL111C ATG10Q07879 167 aa2.03□□□□□ -2.08
RRP42YDL111C SWR1Q05471 1514 aa2.02□□□□□ -2.09
RRP42YDL111C GEA1P47102 1408 aaPredicted RBP2.02□□□□□ -2.09
RRP42YDL111C RPC19P28000 142 aaKnown RBP2.02□□□□□ -2.09
RRP42YDL111C POP7P38291 140 aa2.02□□□□□ -2.09
RRP42YDL111C YBR219CP38317 127 aa2.02□□□□□ -2.09
RRP42YDL111C HYR1P40581 163 aaKnown RBP2.02□□□□□ -2.09
RRP42YDL111C YGL193CP53097 103 aa2.02□□□□□ -2.09
RRP42YDL111C IGO1P53897 168 aa2.02□□□□□ -2.09
RRP42YDL111C UPS3Q04006 179 aa2.02□□□□□ -2.09
RRP42YDL111C UPS1Q05776 175 aa2.02□□□□□ -2.09
RRP42YDL111C YLR162WQ06235 118 aa2.02□□□□□ -2.09
RRP42YDL111C ATG41Q12048 136 aa2.02□□□□□ -2.09
RRP42YDL111C IRC20Q06554 1556 aa2.02□□□□□ -2.09
RRP42YDL111C NUP170P38181 1502 aa2.01□□□□□ -2.09
RRP42YDL111C STU1P38198 1513 aa2.01□□□□□ -2.09
RRP42YDL111C MYO4P32492 1471 aa2.01□□□□□ -2.09
RRP42YDL111C TSC11P40061 1430 aa2.01□□□□□ -2.09
RRP42YDL111C RAD50P12753 1312 aa2.01□□□□□ -2.09
RRP42YDL111C YGR201CP42936 225 aa2.01□□□□□ -2.09
RRP42YDL111C YGR042WP53227 271 aa2.01□□□□□ -2.09
RRP42YDL111C YNR064CP53750 290 aa2.01□□□□□ -2.09
RRP42YDL111C CSN9Q03981 162 aa2.01□□□□□ -2.09
RRP42YDL111C YMR320WQ04897 101 aa2.01□□□□□ -2.09
RRP42YDL111C HRD1Q08109 551 aa2.01□□□□□ -2.09
RRP42YDL111C PST2Q12335 198 aaKnown RBP2.01□□□□□ -2.09
RRP42YDL111C YKL068W-AQ3E826 78 aa2.01□□□□□ -2.09
RRP42YDL111C MSB2P32334 1306 aa2□□□□□ -2.09
RRP42YDL111C YOL162WP0CF19 215 aa2□□□□□ -2.09
RRP42YDL111C PHO13P19881 312 aa2□□□□□ -2.09
RRP42YDL111C YPT31P38555 223 aaKnown RBP2□□□□□ -2.09
RRP42YDL111C HPA3P39979 161 aa2□□□□□ -2.09
RRP42YDL111C GIM4P40005 111 aaKnown RBP2□□□□□ -2.09
RRP42YDL111C RPL13BP40212 199 aaKnown RBP2□□□□□ -2.09
RRP42YDL111C MOB1P40484 314 aa2□□□□□ -2.09
RRP42YDL111C YDR366CP87287 132 aa2□□□□□ -2.09
RRP42YDL111C YML079WQ03629 201 aa2□□□□□ -2.09
RRP42YDL111C YPR114WQ06107 315 aa2□□□□□ -2.09
RRP42YDL111C FIT2Q08906 153 aa2□□□□□ -2.09
RRP42YDL111C RPL13AQ12690 199 aaPredicted RBP2□□□□□ -2.09
RRP42YDL111C FAS1P07149 2051 aaKnown RBP2□□□□□ -2.09
RRP42YDL111C MYO2P19524 1574 aaKnown RBP1.99□□□□□ -2.09
RRP42YDL111C THO2P53552 1597 aaKnown RBP1.99□□□□□ -2.09
RRP42YDL111C GPA2P10823 449 aa1.99□□□□□ -2.09
RRP42YDL111C RPB7P34087 171 aa1.99□□□□□ -2.09
RRP42YDL111C MRPL24P36525 258 aaPredicted RBP1.99□□□□□ -2.09
RRP42YDL111C CYC2P38909 366 aa1.99□□□□□ -2.09
RRP42YDL111C CCS1P40202 249 aaKnown RBP1.99□□□□□ -2.09
RRP42YDL111C MPM1P40364 252 aa1.99□□□□□ -2.09
RRP42YDL111C FLX1P40464 311 aa1.99□□□□□ -2.09
RRP42YDL111C YGL204CP53089 101 aa1.99□□□□□ -2.09
RRP42YDL111C CSI2Q08054 341 aa1.99□□□□□ -2.09
RRP42YDL111C UIP4Q08926 304 aa1.99□□□□□ -2.09
RRP42YDL111C YMR030W-AQ3E760 96 aa1.99□□□□□ -2.09
RRP42YDL111C POL1P13382 1468 aa1.99□□□□□ -2.09
RRP42YDL111C YLR422WQ06409 1932 aa1.99□□□□□ -2.09
RRP42YDL111C SPS2P08459 502 aa1.98□□□□□ -2.09
RRP42YDL111C INO4P13902 151 aa1.98□□□□□ -2.09
RRP42YDL111C STF2P16965 84 aa1.98□□□□□ -2.09
RRP42YDL111C YGL010WP25338 174 aa1.98□□□□□ -2.09
RRP42YDL111C YBL010CP32788 280 aa1.98□□□□□ -2.09
RRP42YDL111C YAE1P47118 141 aaPredicted RBP1.98□□□□□ -2.09
RRP42YDL111C COF1Q03048 143 aaKnown RBP1.98□□□□□ -2.09
RRP42YDL111C RCE1Q03530 315 aa1.98□□□□□ -2.09
RRP42YDL111C YPL225WQ08971 146 aaKnown RBP1.98□□□□□ -2.09
RRP42YDL111C SCC2Q04002 1493 aa1.98□□□□□ -2.09
RRP42YDL111C PDR10P51533 1564 aa1.98□□□□□ -2.09
RRP42YDL111C DNA2P38859 1522 aa1.97□□□□□ -2.09
RRP42YDL111C NUP159P40477 1460 aa1.97□□□□□ -2.09
RRP42YDL111C YGR269WP40326 108 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms