Protein–RNA interactions for Protein: P38790

HTD2, Hydroxyacyl-thioester dehydratase type 2, mitochondrial, yeastyeast

Known RBP Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HTD2P38790 NSR1YGR159C 1245 nt17.71■□□□□ 0.43
HTD2P38790 YML009W-BYML009W-B 477 nt17.41■□□□□ 0.38
HTD2P38790 NOP1YDL014W 984 nt16.7■□□□□ 0.26
HTD2P38790 MDJ1YFL016C 1536 nt16.22■□□□□ 0.19
HTD2P38790 YKL036CYKL036C 393 nt14.97□□□□□ -0.01
HTD2P38790 YJL027CYJL027C 417 nt14.89□□□□□ -0.03
HTD2P38790 SRX1YKL086W 384 nt14.61□□□□□ -0.07
HTD2P38790 Q0297Q0297 156 nt14.48□□□□□ -0.09
HTD2P38790 DBP2YNL112W 1641 nt14.16□□□□□ -0.14
HTD2P38790 YBR190WYBR190W 312 nt13.94□□□□□ -0.18
HTD2P38790 YCR051WYCR051W 669 nt13.81□□□□□ -0.2
HTD2P38790 RTC3YHR087W 336 nt13.59□□□□□ -0.23
HTD2P38790 TRN1tP(UGG)A 72 nt13.52□□□□□ -0.25
HTD2P38790 SUF9tP(UGG)F 72 nt13.52□□□□□ -0.25
HTD2P38790 SUF8tP(UGG)H 72 nt13.52□□□□□ -0.25
HTD2P38790 tP(UGG)LtP(UGG)L 72 nt13.52□□□□□ -0.25
HTD2P38790 SUF7tP(UGG)M 72 nt13.52□□□□□ -0.25
HTD2P38790 tP(UGG)N1tP(UGG)N1 72 nt13.52□□□□□ -0.25
HTD2P38790 tP(UGG)N2tP(UGG)N2 72 nt13.52□□□□□ -0.25
HTD2P38790 tP(UGG)O1tP(UGG)O1 72 nt13.52□□□□□ -0.25
HTD2P38790 SUF11tP(UGG)O2 72 nt13.52□□□□□ -0.25
HTD2P38790 SSA3YBL075C 1950 nt13.4□□□□□ -0.26
HTD2P38790 SCS3YGL126W 1143 nt13.39□□□□□ -0.27
HTD2P38790 CCC1YLR220W 969 nt13.35□□□□□ -0.27
HTD2P38790 RVS167YDR388W 1449 nt13.16□□□□□ -0.3
HTD2P38790 PUT4YOR348C 1884 nt13.06□□□□□ -0.32
HTD2P38790 SCJ1YMR214W 1134 nt13.05□□□□□ -0.32
HTD2P38790 RPP1BYDL130W 321 nt12.99□□□□□ -0.33
HTD2P38790 YOL085CYOL085C 342 nt12.99□□□□□ -0.33
HTD2P38790 PKP1YIL042C 1185 nt12.85□□□□□ -0.35
HTD2P38790 ARE1YCR048W 1833 nt12.68□□□□□ -0.38
HTD2P38790 tP(UGG)O3tP(UGG)O3 72 nt12.61□□□□□ -0.39
HTD2P38790 SHR5YOL110W 714 nt12.61□□□□□ -0.39
HTD2P38790 POA1YBR022W 534 nt12.58□□□□□ -0.4
HTD2P38790 URN1YPR152C 1398 nt12.56□□□□□ -0.4
HTD2P38790 SAH1YER043C 1350 nt12.53□□□□□ -0.4
HTD2P38790 YHR049C-AYHR049C-A 297 nt12.51□□□□□ -0.41
HTD2P38790 PET122YER153C 765 nt12.49□□□□□ -0.41
HTD2P38790 OPI9YLR338W 858 nt12.47□□□□□ -0.41
HTD2P38790 BSC6YOL137W 1494 nt12.42□□□□□ -0.42
HTD2P38790 DEP1YAL013W 1218 nt12.41□□□□□ -0.42
HTD2P38790 SPT5YML010W 3192 nt12.27□□□□□ -0.45
HTD2P38790 RPN10YHR200W 807 nt12.24□□□□□ -0.45
HTD2P38790 YDJ1YNL064C 1230 nt12.2□□□□□ -0.46
HTD2P38790 SCR1SCR1 522 nt12.18□□□□□ -0.46
HTD2P38790 YNL208WYNL208W 600 nt12.16□□□□□ -0.46
HTD2P38790 BUD23YCR047C 828 nt12.15□□□□□ -0.46
HTD2P38790 PUN1YLR414C 792 nt12.1□□□□□ -0.47
HTD2P38790 RRN5YLR141W 1092 nt12.05□□□□□ -0.48
HTD2P38790 PTC2YER089C 1395 nt12.05□□□□□ -0.48
HTD2P38790 SSA4YER103W 1929 nt12.03□□□□□ -0.48
HTD2P38790 GAR1YHR089C 618 nt12□□□□□ -0.49
HTD2P38790 NAB2YGL122C 1578 nt11.95□□□□□ -0.5
HTD2P38790 YJR018WYJR018W 363 nt11.94□□□□□ -0.5
HTD2P38790 YER088W-BYER088W-B 147 nt11.83□□□□□ -0.52
HTD2P38790 ATS1YAL020C 1002 nt11.82□□□□□ -0.52
HTD2P38790 FIS1YIL065C 468 nt11.78□□□□□ -0.52
HTD2P38790 MEP2YNL142W 1500 nt11.71□□□□□ -0.53
HTD2P38790 DAL1YIR027C 1383 nt11.71□□□□□ -0.53
HTD2P38790 YJR120WYJR120W 351 nt11.7□□□□□ -0.54
HTD2P38790 FPR4YLR449W 1179 nt11.65□□□□□ -0.54
HTD2P38790 RSB1YOR049C 1065 nt11.65□□□□□ -0.54
HTD2P38790 BDF1YLR399C 2061 nt11.64□□□□□ -0.55
HTD2P38790 TIR1YER011W 765 nt11.63□□□□□ -0.55
HTD2P38790 SSA1YAL005C 1929 nt11.62□□□□□ -0.55
HTD2P38790 PHO4YFR034C 939 nt11.61□□□□□ -0.55
HTD2P38790 YPS1YLR120C 1710 nt11.57□□□□□ -0.56
HTD2P38790 INM2YDR287W 879 nt11.56□□□□□ -0.56
HTD2P38790 RPP2BYDR382W 333 nt11.55□□□□□ -0.56
HTD2P38790 DCW1YKL046C 1350 nt11.54□□□□□ -0.56
HTD2P38790 TAT1YBR069C 1860 nt11.47□□□□□ -0.57
HTD2P38790 YHR165W-AYHR165W-A 312 nt11.44□□□□□ -0.58
HTD2P38790 YDR095CYDR095C 411 nt11.41□□□□□ -0.58
HTD2P38790 YBL100CYBL100C 315 nt11.4□□□□□ -0.58
HTD2P38790 SRB2YHR041C 633 nt11.35□□□□□ -0.59
HTD2P38790 EMI2YDR516C 1503 nt11.35□□□□□ -0.59
HTD2P38790 YBR220CYBR220C 1683 nt11.32□□□□□ -0.6
HTD2P38790 YMR090WYMR090W 684 nt11.27□□□□□ -0.61
HTD2P38790 BDH2YAL061W 1254 nt11.26□□□□□ -0.61
HTD2P38790 FUN26YAL022C 1554 nt11.24□□□□□ -0.61
HTD2P38790 YDL221WYDL221W 552 nt11.24□□□□□ -0.61
HTD2P38790 PTP1YDL230W 1008 nt11.21□□□□□ -0.61
HTD2P38790 CAC2YML102W 1407 nt11.2□□□□□ -0.62
HTD2P38790 SDH1YKL148C 1923 nt11.19□□□□□ -0.62
HTD2P38790 RPP2AYOL039W 321 nt11.18□□□□□ -0.62
HTD2P38790 ALF1YNL148C 765 nt11.17□□□□□ -0.62
HTD2P38790 TRM9YML014W 840 nt11.1□□□□□ -0.63
HTD2P38790 CCT6YDR188W 1641 nt11.06□□□□□ -0.64
HTD2P38790 IRC15YPL017C 1500 nt11.05□□□□□ -0.64
HTD2P38790 SCC4YER147C 1875 nt11.05□□□□□ -0.64
HTD2P38790 PST2YDR032C 597 nt11.04□□□□□ -0.64
HTD2P38790 WWM1YFL010C 636 nt11.04□□□□□ -0.64
HTD2P38790 SIS1YNL007C 1059 nt11.03□□□□□ -0.64
HTD2P38790 LSM3YLR438C-A 270 nt11.01□□□□□ -0.65
HTD2P38790 PCH2YBR186W 1695 nt10.99□□□□□ -0.65
HTD2P38790 PAC11YDR488C 1602 nt10.98□□□□□ -0.65
HTD2P38790 GIS3YLR094C 1509 nt10.98□□□□□ -0.65
HTD2P38790 SUF2tP(AGG)C 72 nt10.97□□□□□ -0.65
HTD2P38790 SUF10tP(AGG)N 72 nt10.97□□□□□ -0.65
HTD2P38790 GUT2YIL155C 1950 nt10.96□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 38.5 ms