Protein–RNA interactions for Protein: P39989

YEL028W, Uncharacterized protein YEL028W, yeastyeast

Predictions only

Length 153 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YEL028WP39989 YML009W-BYML009W-B 477 nt21.01■□□□□ 0.95
YEL028WP39989 NSR1YGR159C 1245 nt20.89■□□□□ 0.93
YEL028WP39989 NOP1YDL014W 984 nt20.43■□□□□ 0.86
YEL028WP39989 YKL036CYKL036C 393 nt18.87■□□□□ 0.61
YEL028WP39989 MDJ1YFL016C 1536 nt18.54■□□□□ 0.56
YEL028WP39989 Q0297Q0297 156 nt17.9■□□□□ 0.46
YEL028WP39989 SRX1YKL086W 384 nt17.86■□□□□ 0.45
YEL028WP39989 YJL027CYJL027C 417 nt17.61■□□□□ 0.41
YEL028WP39989 SCS3YGL126W 1143 nt17.16■□□□□ 0.34
YEL028WP39989 YCR051WYCR051W 669 nt16.94■□□□□ 0.3
YEL028WP39989 DBP2YNL112W 1641 nt16.41■□□□□ 0.22
YEL028WP39989 YOL085CYOL085C 342 nt16.35■□□□□ 0.21
YEL028WP39989 TRN1tP(UGG)A 72 nt16.15■□□□□ 0.18
YEL028WP39989 SUF9tP(UGG)F 72 nt16.15■□□□□ 0.18
YEL028WP39989 SUF8tP(UGG)H 72 nt16.15■□□□□ 0.18
YEL028WP39989 tP(UGG)LtP(UGG)L 72 nt16.15■□□□□ 0.18
YEL028WP39989 SUF7tP(UGG)M 72 nt16.15■□□□□ 0.18
YEL028WP39989 tP(UGG)N1tP(UGG)N1 72 nt16.15■□□□□ 0.18
YEL028WP39989 tP(UGG)N2tP(UGG)N2 72 nt16.15■□□□□ 0.18
YEL028WP39989 tP(UGG)O1tP(UGG)O1 72 nt16.15■□□□□ 0.18
YEL028WP39989 SUF11tP(UGG)O2 72 nt16.15■□□□□ 0.18
YEL028WP39989 PKP1YIL042C 1185 nt16.1■□□□□ 0.17
YEL028WP39989 RPP1BYDL130W 321 nt16.06■□□□□ 0.16
YEL028WP39989 CCC1YLR220W 969 nt15.98■□□□□ 0.15
YEL028WP39989 YBR190WYBR190W 312 nt15.8■□□□□ 0.12
YEL028WP39989 RTC3YHR087W 336 nt15.44■□□□□ 0.06
YEL028WP39989 RVS167YDR388W 1449 nt15.41■□□□□ 0.06
YEL028WP39989 ATS1YAL020C 1002 nt15.36■□□□□ 0.05
YEL028WP39989 PET122YER153C 765 nt15.35■□□□□ 0.05
YEL028WP39989 SCJ1YMR214W 1134 nt15.35■□□□□ 0.05
YEL028WP39989 tP(UGG)O3tP(UGG)O3 72 nt15.29■□□□□ 0.04
YEL028WP39989 SCR1SCR1 522 nt15.17■□□□□ 0.02
YEL028WP39989 RRN5YLR141W 1092 nt14.91□□□□□ -0.02
YEL028WP39989 SHR5YOL110W 714 nt14.89□□□□□ -0.03
YEL028WP39989 YDJ1YNL064C 1230 nt14.79□□□□□ -0.04
YEL028WP39989 YER088W-BYER088W-B 147 nt14.61□□□□□ -0.07
YEL028WP39989 RSB1YOR049C 1065 nt14.59□□□□□ -0.07
YEL028WP39989 URN1YPR152C 1398 nt14.47□□□□□ -0.09
YEL028WP39989 DEP1YAL013W 1218 nt14.46□□□□□ -0.09
YEL028WP39989 GAR1YHR089C 618 nt14.45□□□□□ -0.1
YEL028WP39989 PUT4YOR348C 1884 nt14.34□□□□□ -0.11
YEL028WP39989 OPI9YLR338W 858 nt14.26□□□□□ -0.13
YEL028WP39989 RPN10YHR200W 807 nt14.25□□□□□ -0.13
YEL028WP39989 YNL208WYNL208W 600 nt14.24□□□□□ -0.13
YEL028WP39989 PST2YDR032C 597 nt14.23□□□□□ -0.13
YEL028WP39989 SAH1YER043C 1350 nt14.17□□□□□ -0.14
YEL028WP39989 ARE1YCR048W 1833 nt14.09□□□□□ -0.15
YEL028WP39989 TIR1YER011W 765 nt13.97□□□□□ -0.17
YEL028WP39989 YHR049C-AYHR049C-A 297 nt13.9□□□□□ -0.18
YEL028WP39989 POA1YBR022W 534 nt13.9□□□□□ -0.18
YEL028WP39989 PUN1YLR414C 792 nt13.84□□□□□ -0.19
YEL028WP39989 YJR018WYJR018W 363 nt13.81□□□□□ -0.2
YEL028WP39989 SSA1YAL005C 1929 nt13.8□□□□□ -0.2
YEL028WP39989 PTC2YER089C 1395 nt13.68□□□□□ -0.22
YEL028WP39989 YKL097CYKL097C 411 nt13.66□□□□□ -0.22
YEL028WP39989 SHU1YHL006C 453 nt13.65□□□□□ -0.22
YEL028WP39989 YJR120WYJR120W 351 nt13.61□□□□□ -0.23
YEL028WP39989 BSC6YOL137W 1494 nt13.59□□□□□ -0.23
YEL028WP39989 BUD23YCR047C 828 nt13.58□□□□□ -0.24
YEL028WP39989 SRB2YHR041C 633 nt13.58□□□□□ -0.24
YEL028WP39989 RPP2BYDR382W 333 nt13.52□□□□□ -0.25
YEL028WP39989 NAB2YGL122C 1578 nt13.49□□□□□ -0.25
YEL028WP39989 YAL037C-BYAL037C-B 975 nt13.44□□□□□ -0.26
YEL028WP39989 WWM1YFL010C 636 nt13.35□□□□□ -0.27
YEL028WP39989 SSA3YBL075C 1950 nt13.34□□□□□ -0.27
YEL028WP39989 INM2YDR287W 879 nt13.32□□□□□ -0.28
YEL028WP39989 DAL1YIR027C 1383 nt13.32□□□□□ -0.28
YEL028WP39989 FIS1YIL065C 468 nt13.3□□□□□ -0.28
YEL028WP39989 FPR4YLR449W 1179 nt13.28□□□□□ -0.28
YEL028WP39989 YGR021WYGR021W 873 nt13.27□□□□□ -0.29
YEL028WP39989 BDH2YAL061W 1254 nt13.27□□□□□ -0.29
YEL028WP39989 HOM6YJR139C 1080 nt13.24□□□□□ -0.29
YEL028WP39989 PHO4YFR034C 939 nt13.19□□□□□ -0.3
YEL028WP39989 YBL100CYBL100C 315 nt13.19□□□□□ -0.3
YEL028WP39989 MNP1YGL068W 585 nt13.17□□□□□ -0.3
YEL028WP39989 YFL021C-AYFL021C-A 855 nt13.14□□□□□ -0.31
YEL028WP39989 YOR139CYOR139C 393 nt13.13□□□□□ -0.31
YEL028WP39989 LSM3YLR438C-A 270 nt13.1□□□□□ -0.31
YEL028WP39989 RKM5YLR137W 1104 nt13.04□□□□□ -0.32
YEL028WP39989 FUN26YAL022C 1554 nt13.03□□□□□ -0.32
YEL028WP39989 TRM9YML014W 840 nt13.01□□□□□ -0.33
YEL028WP39989 NPL3YDR432W 1245 nt13□□□□□ -0.33
YEL028WP39989 YOL037CYOL037C 354 nt12.95□□□□□ -0.34
YEL028WP39989 SPT5YML010W 3192 nt12.93□□□□□ -0.34
YEL028WP39989 YPS1YLR120C 1710 nt12.93□□□□□ -0.34
YEL028WP39989 CCT6YDR188W 1641 nt12.88□□□□□ -0.35
YEL028WP39989 YDR095CYDR095C 411 nt12.86□□□□□ -0.35
YEL028WP39989 ALF1YNL148C 765 nt12.84□□□□□ -0.35
YEL028WP39989 YHR165W-AYHR165W-A 312 nt12.78□□□□□ -0.36
YEL028WP39989 SUF2tP(AGG)C 72 nt12.76□□□□□ -0.37
YEL028WP39989 SUF10tP(AGG)N 72 nt12.76□□□□□ -0.37
YEL028WP39989 MEP2YNL142W 1500 nt12.76□□□□□ -0.37
YEL028WP39989 SIS1YNL007C 1059 nt12.66□□□□□ -0.38
YEL028WP39989 YLR281CYLR281C 468 nt12.65□□□□□ -0.38
YEL028WP39989 tM(CAU)CtM(CAU)C 72 nt12.63□□□□□ -0.39
YEL028WP39989 IMT4tM(CAU)E 72 nt12.63□□□□□ -0.39
YEL028WP39989 IMT3tM(CAU)J3 72 nt12.63□□□□□ -0.39
YEL028WP39989 IMT1tM(CAU)O1 72 nt12.63□□□□□ -0.39
YEL028WP39989 IMT2tM(CAU)P 72 nt12.63□□□□□ -0.39
YEL028WP39989 RPP2AYOL039W 321 nt12.62□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms