RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W ORM2Q06144 216 aa6.78□□□□□ -1.32
SKN1YGR143W MDM38Q08179 573 aa6.78□□□□□ -1.32
SKN1YGR143W GLE1Q12315 538 aa6.78□□□□□ -1.32
SKN1YGR143W URB1P34241 1764 aaKnown RBP6.78□□□□□ -1.32
SKN1YGR143W RPL5P26321 297 aaKnown RBP6.78□□□□□ -1.32
SKN1YGR143W YCK3P39962 524 aa6.78□□□□□ -1.32
SKN1YGR143W TFG1P41895 735 aaPredicted RBP6.78□□□□□ -1.32
SKN1YGR143W VPS30Q02948 557 aa6.78□□□□□ -1.32
SKN1YGR143W YMR074CQ04773 145 aa6.78□□□□□ -1.32
SKN1YGR143W PSO2P30620 661 aa6.77□□□□□ -1.33
SKN1YGR143W ZUO1P32527 433 aaKnown RBP6.77□□□□□ -1.33
SKN1YGR143W NPR3P38742 1146 aa6.77□□□□□ -1.33
SKN1YGR143W KAR3P17119 729 aa6.77□□□□□ -1.33
SKN1YGR143W SPT5P27692 1063 aaKnown RBP6.77□□□□□ -1.33
SKN1YGR143W GCD6P32501 712 aaKnown RBP6.77□□□□□ -1.33
SKN1YGR143W APL6P46682 809 aa6.77□□□□□ -1.33
SKN1YGR143W LSP1Q12230 341 aaKnown RBP6.77□□□□□ -1.33
SKN1YGR143W FKS3Q04952 1785 aa6.76□□□□□ -1.33
SKN1YGR143W EDE1P34216 1381 aa6.76□□□□□ -1.33
SKN1YGR143W RPS24AP0CX31 135 aaKnown RBP6.76□□□□□ -1.33
SKN1YGR143W RPS24BP0CX32 135 aaKnown RBP6.76□□□□□ -1.33
SKN1YGR143W SSA4P22202 642 aaKnown RBP6.76□□□□□ -1.33
SKN1YGR143W TAF1P46677 1066 aa6.76□□□□□ -1.33
SKN1YGR143W RIX7Q07844 837 aaKnown RBP6.76□□□□□ -1.33
SKN1YGR143W SLP1Q12232 587 aa6.76□□□□□ -1.33
SKN1YGR143W SWH1P35845 1188 aa6.76□□□□□ -1.33
SKN1YGR143W CSE4P36012 229 aa6.76□□□□□ -1.33
SKN1YGR143W RPT2P40327 437 aaKnown RBP6.76□□□□□ -1.33
SKN1YGR143W YMR1P47147 688 aaKnown RBP RIP-Chip data6.76□□□□□ -1.33not detected
SKN1YGR143W RTS3P53289 263 aa6.76□□□□□ -1.33
SKN1YGR143W PXR1P53335 271 aaPredicted RBP6.76□□□□□ -1.33
SKN1YGR143W RRB1Q04225 511 aaKnown RBP6.76□□□□□ -1.33
SKN1YGR143W ARR1Q06596 294 aa6.76□□□□□ -1.33
SKN1YGR143W PSK2Q08217 1101 aa6.76□□□□□ -1.33
SKN1YGR143W NOP14Q99207 810 aaKnown RBP6.76□□□□□ -1.33
SKN1YGR143W LEU2P04173 364 aaPredicted RBP6.75□□□□□ -1.33
SKN1YGR143W RAD2P07276 1031 aa6.75□□□□□ -1.33
SKN1YGR143W SEC27P41811 889 aaKnown RBP6.75□□□□□ -1.33
SKN1YGR143W YLR257WQ06146 321 aaKnown RBP6.75□□□□□ -1.33
SKN1YGR143W YKR023WP36119 530 aaKnown RBP6.75□□□□□ -1.33
SKN1YGR143W SIT1P39980 628 aa6.75□□□□□ -1.33
SKN1YGR143W KEX2P13134 814 aa6.74□□□□□ -1.33
SKN1YGR143W PSE1P32337 1089 aaKnown RBP6.74□□□□□ -1.33
SKN1YGR143W KNS1P32350 737 aaPredicted RBP6.74□□□□□ -1.33
SKN1YGR143W CIN4P39110 191 aa6.74□□□□□ -1.33
SKN1YGR143W YIR014WP40570 242 aa6.74□□□□□ -1.33
SKN1YGR143W PRP43P53131 767 aaKnown RBP6.74□□□□□ -1.33
SKN1YGR143W DMA2P53924 522 aa6.74□□□□□ -1.33
SKN1YGR143W RNT1Q02555 471 aa6.74□□□□□ -1.33
SKN1YGR143W VPS60Q03390 229 aa6.74□□□□□ -1.33
SKN1YGR143W SPB4P25808 606 aaPredicted RBP6.73□□□□□ -1.33
SKN1YGR143W TPM2P40414 161 aa6.73□□□□□ -1.33
SKN1YGR143W JJJ1P53863 590 aa6.73□□□□□ -1.33
SKN1YGR143W SYH1Q02875 849 aaKnown RBP6.73□□□□□ -1.33
SKN1YGR143W GDE1Q02979 1223 aa6.73□□□□□ -1.33
SKN1YGR143W YRF1-3P0CX14 1859 aa6.73□□□□□ -1.33
SKN1YGR143W YRF1-7P0CX15 1859 aa6.73□□□□□ -1.33
SKN1YGR143W YRF1-6P53819 1859 aa6.73□□□□□ -1.33
SKN1YGR143W RAD3P06839 778 aa6.73□□□□□ -1.33
SKN1YGR143W ZDS1P50111 915 aaKnown RBP6.73□□□□□ -1.33
SKN1YGR143W BRE1Q07457 700 aaKnown RBP6.73□□□□□ -1.33
SKN1YGR143W PUS1Q12211 544 aaKnown RBP6.73□□□□□ -1.33
SKN1YGR143W MLP1Q02455 1875 aaKnown RBP6.72□□□□□ -1.33
SKN1YGR143W UBP1P25037 809 aa6.72□□□□□ -1.33
SKN1YGR143W BUD31P25337 157 aaPredicted RBP6.72□□□□□ -1.33
SKN1YGR143W AIM21P40563 679 aa6.72□□□□□ -1.33
SKN1YGR143W SLM3Q12093 417 aa6.72□□□□□ -1.33
SKN1YGR143W BRF1P29056 596 aa6.72□□□□□ -1.33
SKN1YGR143W IES2P40154 320 aa6.72□□□□□ -1.33
SKN1YGR143W HUL5P53119 910 aa6.72□□□□□ -1.33
SKN1YGR143W MEH1Q02205 184 aa6.72□□□□□ -1.33
SKN1YGR143W TCB1Q12466 1186 aa6.72□□□□□ -1.33
SKN1YGR143W RSF2P46974 1380 aa6.71□□□□□ -1.33
SKN1YGR143W TY4A-JP47023 414 aa6.71□□□□□ -1.33
SKN1YGR143W AAD16Q02895 342 aa6.71□□□□□ -1.33
SKN1YGR143W RRP9Q06506 573 aaKnown RBP6.71□□□□□ -1.33
SKN1YGR143W APC1P53886 1748 aa6.71□□□□□ -1.34
SKN1YGR143W PDR1P12383 1068 aa6.71□□□□□ -1.34
SKN1YGR143W GEF1P37020 779 aa6.71□□□□□ -1.34
SKN1YGR143W BEM4P39011 633 aa6.71□□□□□ -1.34
SKN1YGR143W DOT5P40553 215 aa6.71□□□□□ -1.34
SKN1YGR143W HEL2Q05580 639 aaKnown RBP6.71□□□□□ -1.34
SKN1YGR143W UTP13Q05946 817 aaKnown RBP6.71□□□□□ -1.34
SKN1YGR143W PEX19Q07418 342 aa6.71□□□□□ -1.34
SKN1YGR143W NUF2P33895 451 aa6.7□□□□□ -1.34
SKN1YGR143W FKH1P40466 484 aa6.7□□□□□ -1.34
SKN1YGR143W IAH1P41734 238 aa6.7□□□□□ -1.34
SKN1YGR143W PCT1P13259 424 aa6.7□□□□□ -1.34
SKN1YGR143W RTG3P38165 486 aa6.7□□□□□ -1.34
SKN1YGR143W BNI4P53858 892 aa6.7□□□□□ -1.34
SKN1YGR143W YPR172WQ06608 200 aa6.7□□□□□ -1.34
SKN1YGR143W UTP4Q06679 776 aaKnown RBP6.7□□□□□ -1.34
SKN1YGR143W SEC39Q12745 709 aa6.7□□□□□ -1.34
SKN1YGR143W MSP1P28737 362 aa6.69□□□□□ -1.34
SKN1YGR143W ARL1P38116 183 aaKnown RBP6.69□□□□□ -1.34
SKN1YGR143W RPN11P43588 306 aaKnown RBP6.68□□□□□ -1.34
SKN1YGR143W FOX2Q02207 900 aaKnown RBP6.68□□□□□ -1.34
SKN1YGR143W YOL087CQ99247 1116 aa6.68□□□□□ -1.34
SKN1YGR143W RPL17AP05740 184 aaKnown RBP6.68□□□□□ -1.34
SKN1YGR143W PRI1P10363 409 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms