Protein–RNA interactions for Protein: P39980

SIT1, Siderophore iron transporter 1, yeastyeast

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIT1P39980 NSR1YGR159C 1245 nt16.62■□□□□ 0.25
SIT1P39980 MDJ1YFL016C 1536 nt16.01■□□□□ 0.15
SIT1P39980 SSA3YBL075C 1950 nt15.93■□□□□ 0.14
SIT1P39980 YML009W-BYML009W-B 477 nt15.67■□□□□ 0.1
SIT1P39980 NOP1YDL014W 984 nt14.7□□□□□ -0.06
SIT1P39980 YJL027CYJL027C 417 nt14.52□□□□□ -0.09
SIT1P39980 YBR190WYBR190W 312 nt13.9□□□□□ -0.18
SIT1P39980 DBP2YNL112W 1641 nt13.75□□□□□ -0.21
SIT1P39980 Q0182Q0182 405 nt13.7□□□□□ -0.22
SIT1P39980 PUT4YOR348C 1884 nt13.69□□□□□ -0.22
SIT1P39980 SSA4YER103W 1929 nt13.62□□□□□ -0.23
SIT1P39980 SPT5YML010W 3192 nt13.61□□□□□ -0.23
SIT1P39980 RTC3YHR087W 336 nt13.45□□□□□ -0.26
SIT1P39980 PAC11YDR488C 1602 nt13.39□□□□□ -0.27
SIT1P39980 BDF1YLR399C 2061 nt13.33□□□□□ -0.28
SIT1P39980 MOT3YMR070W 1473 nt13.32□□□□□ -0.28
SIT1P39980 NVJ2YPR091C 2313 nt13.29□□□□□ -0.28
SIT1P39980 YKL036CYKL036C 393 nt13.16□□□□□ -0.3
SIT1P39980 TAT1YBR069C 1860 nt13.09□□□□□ -0.31
SIT1P39980 POA1YBR022W 534 nt13.07□□□□□ -0.32
SIT1P39980 BSC6YOL137W 1494 nt13.07□□□□□ -0.32
SIT1P39980 ARE1YCR048W 1833 nt13.06□□□□□ -0.32
SIT1P39980 FPS1YLL043W 2010 nt12.93□□□□□ -0.34
SIT1P39980 SRX1YKL086W 384 nt12.87□□□□□ -0.35
SIT1P39980 YHR049C-AYHR049C-A 297 nt12.84□□□□□ -0.35
SIT1P39980 URN1YPR152C 1398 nt12.63□□□□□ -0.39
SIT1P39980 SAH1YER043C 1350 nt12.56□□□□□ -0.4
SIT1P39980 Q0297Q0297 156 nt12.53□□□□□ -0.4
SIT1P39980 TRN1tP(UGG)A 72 nt12.43□□□□□ -0.42
SIT1P39980 SUF9tP(UGG)F 72 nt12.43□□□□□ -0.42
SIT1P39980 SUF8tP(UGG)H 72 nt12.43□□□□□ -0.42
SIT1P39980 tP(UGG)LtP(UGG)L 72 nt12.43□□□□□ -0.42
SIT1P39980 SUF7tP(UGG)M 72 nt12.43□□□□□ -0.42
SIT1P39980 tP(UGG)N1tP(UGG)N1 72 nt12.43□□□□□ -0.42
SIT1P39980 tP(UGG)N2tP(UGG)N2 72 nt12.43□□□□□ -0.42
SIT1P39980 tP(UGG)O1tP(UGG)O1 72 nt12.43□□□□□ -0.42
SIT1P39980 SUF11tP(UGG)O2 72 nt12.43□□□□□ -0.42
SIT1P39980 RVS167YDR388W 1449 nt12.4□□□□□ -0.42
SIT1P39980 MEP2YNL142W 1500 nt12.39□□□□□ -0.43
SIT1P39980 UME6YDR207C 2511 nt12.37□□□□□ -0.43
SIT1P39980 BUD23YCR047C 828 nt12.35□□□□□ -0.43
SIT1P39980 SCJ1YMR214W 1134 nt12.33□□□□□ -0.44
SIT1P39980 OPI9YLR338W 858 nt12.3□□□□□ -0.44
SIT1P39980 SSA1YAL005C 1929 nt12.28□□□□□ -0.44
SIT1P39980 YBR220CYBR220C 1683 nt12.23□□□□□ -0.45
SIT1P39980 DCW1YKL046C 1350 nt12.22□□□□□ -0.45
SIT1P39980 GUT2YIL155C 1950 nt12.21□□□□□ -0.45
SIT1P39980 CCC1YLR220W 969 nt12.2□□□□□ -0.46
SIT1P39980 PCH2YBR186W 1695 nt12.1□□□□□ -0.47
SIT1P39980 YCR051WYCR051W 669 nt12.06□□□□□ -0.48
SIT1P39980 PIB2YGL023C 1908 nt12.01□□□□□ -0.49
SIT1P39980 PTC2YER089C 1395 nt12□□□□□ -0.49
SIT1P39980 NAB2YGL122C 1578 nt11.97□□□□□ -0.49
SIT1P39980 EMI2YDR516C 1503 nt11.95□□□□□ -0.5
SIT1P39980 SCS3YGL126W 1143 nt11.88□□□□□ -0.51
SIT1P39980 SDH1YKL148C 1923 nt11.88□□□□□ -0.51
SIT1P39980 DEP1YAL013W 1218 nt11.87□□□□□ -0.51
SIT1P39980 PUN1YLR414C 792 nt11.87□□□□□ -0.51
SIT1P39980 SEC11YIR022W 504 nt11.84□□□□□ -0.51
SIT1P39980 FIS1YIL065C 468 nt11.83□□□□□ -0.52
SIT1P39980 YMR090WYMR090W 684 nt11.81□□□□□ -0.52
SIT1P39980 MCH5YOR306C 1566 nt11.77□□□□□ -0.53
SIT1P39980 YDL221WYDL221W 552 nt11.77□□□□□ -0.53
SIT1P39980 SHR5YOL110W 714 nt11.77□□□□□ -0.53
SIT1P39980 YPS1YLR120C 1710 nt11.77□□□□□ -0.53
SIT1P39980 BOR1YNL275W 1731 nt11.76□□□□□ -0.53
SIT1P39980 RTF1YGL244W 1677 nt11.64□□□□□ -0.55
SIT1P39980 YHR165W-AYHR165W-A 312 nt11.63□□□□□ -0.55
SIT1P39980 RPN10YHR200W 807 nt11.63□□□□□ -0.55
SIT1P39980 DAL1YIR027C 1383 nt11.6□□□□□ -0.55
SIT1P39980 SCC4YER147C 1875 nt11.59□□□□□ -0.55
SIT1P39980 CAC2YML102W 1407 nt11.58□□□□□ -0.56
SIT1P39980 PTK1YKL198C 1989 nt11.58□□□□□ -0.56
SIT1P39980 PHO4YFR034C 939 nt11.54□□□□□ -0.56
SIT1P39980 YJR018WYJR018W 363 nt11.54□□□□□ -0.56
SIT1P39980 YSC84YHR016C 1407 nt11.51□□□□□ -0.57
SIT1P39980 YDR095CYDR095C 411 nt11.5□□□□□ -0.57
SIT1P39980 YNL208WYNL208W 600 nt11.5□□□□□ -0.57
SIT1P39980 FPR4YLR449W 1179 nt11.48□□□□□ -0.57
SIT1P39980 YHL050CYHL050C 2094 nt11.48□□□□□ -0.57
SIT1P39980 PTP1YDL230W 1008 nt11.45□□□□□ -0.58
SIT1P39980 YOL085CYOL085C 342 nt11.43□□□□□ -0.58
SIT1P39980 IRC15YPL017C 1500 nt11.42□□□□□ -0.58
SIT1P39980 ALG12YNR030W 1656 nt11.41□□□□□ -0.58
SIT1P39980 BOP3YNL042W 1191 nt11.38□□□□□ -0.59
SIT1P39980 GIS3YLR094C 1509 nt11.35□□□□□ -0.59
SIT1P39980 YJR120WYJR120W 351 nt11.33□□□□□ -0.6
SIT1P39980 tP(UGG)O3tP(UGG)O3 72 nt11.31□□□□□ -0.6
SIT1P39980 HSP60YLR259C 1719 nt11.25□□□□□ -0.61
SIT1P39980 INM2YDR287W 879 nt11.24□□□□□ -0.61
SIT1P39980 RPP1BYDL130W 321 nt11.23□□□□□ -0.61
SIT1P39980 SPT8YLR055C 1809 nt11.22□□□□□ -0.61
SIT1P39980 RPP2AYOL039W 321 nt11.22□□□□□ -0.61
SIT1P39980 RRT12YCR045C 1476 nt11.21□□□□□ -0.61
SIT1P39980 PKP1YIL042C 1185 nt11.15□□□□□ -0.62
SIT1P39980 YFL054CYFL054C 1941 nt11.15□□□□□ -0.62
SIT1P39980 NCP1YHR042W 2076 nt11.13□□□□□ -0.63
SIT1P39980 HSL7YBR133C 2484 nt11.1□□□□□ -0.63
SIT1P39980 NME1NME1 340 nt11.09□□□□□ -0.63
SIT1P39980 NAR1YNL240C 1476 nt11.06□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 15.6 ms