RNA–Protein interactions for RNA: YER013W

PRP22, Transcript of DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase, yeast

Gene PRP22, Length 3,438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP22	YER013W	ROM2	P51862	1356 aa	Known RBP	4.08	□□□□□ -1.76
PRP22	YER013W	CPS1	P27614	576 aa		4.08	□□□□□ -1.76
PRP22	YER013W	SPT16	P32558	1035 aa	Known RBP	4.08	□□□□□ -1.76
PRP22	YER013W	VPS24	P36095	224 aa	Known RBP	4.08	□□□□□ -1.76
PRP22	YER013W	UTP13	Q05946	817 aa	Known RBP	4.08	□□□□□ -1.76
PRP22	YER013W	LSP1	Q12230	341 aa	Known RBP	4.08	□□□□□ -1.76
PRP22	YER013W	HAP1	P0CE41	1502 aa		4.08	□□□□□ -1.76
PRP22	YER013W	VPS15	P22219	1454 aa		4.08	□□□□□ -1.76
PRP22	YER013W	RPC82	P32349	654 aa		4.08	□□□□□ -1.76
PRP22	YER013W	GRE2	Q12068	342 aa	Known RBP	4.08	□□□□□ -1.76
PRP22	YER013W	NFI1	Q12216	726 aa		4.08	□□□□□ -1.76
PRP22	YER013W	SIT4	P20604	311 aa		4.07	□□□□□ -1.76
PRP22	YER013W	SWI3	P32591	825 aa		4.07	□□□□□ -1.76
PRP22	YER013W	YGL140C	P53120	1219 aa		4.07	□□□□□ -1.76
PRP22	YER013W	KRE33	P53914	1056 aa	Known RBP	4.07	□□□□□ -1.76
PRP22	YER013W	PSR1	Q07800	427 aa		4.07	□□□□□ -1.76
PRP22	YER013W	SPT5	P27692	1063 aa	Known RBP	4.07	□□□□□ -1.76
PRP22	YER013W	HIF1	Q12373	385 aa		4.07	□□□□□ -1.76
PRP22	YER013W	MST1	P07236	462 aa		4.07	□□□□□ -1.76
PRP22	YER013W	YML083C	Q04526	418 aa		4.07	□□□□□ -1.76
PRP22	YER013W	DOP1	Q03921	1698 aa		4.06	□□□□□ -1.76
PRP22	YER013W	RAD54	P32863	898 aa		4.06	□□□□□ -1.76
PRP22	YER013W	RKM3	P38222	552 aa		4.06	□□□□□ -1.76
PRP22	YER013W	FPK1	P53739	893 aa		4.06	□□□□□ -1.76
PRP22	YER013W	VPS60	Q03390	229 aa		4.06	□□□□□ -1.76
PRP22	YER013W	RME1	P32338	300 aa	Known RBP	4.06	□□□□□ -1.76
PRP22	YER013W	SIT1	P39980	628 aa		4.06	□□□□□ -1.76
PRP22	YER013W	HAP5	Q02516	242 aa		4.06	□□□□□ -1.76
PRP22	YER013W	PUP2	P32379	260 aa		4.05	□□□□□ -1.76
PRP22	YER013W	ELM1	P32801	640 aa		4.05	□□□□□ -1.76
PRP22	YER013W	CSE4	P36012	229 aa		4.05	□□□□□ -1.76
PRP22	YER013W	YAP5	P40574	245 aa		4.05	□□□□□ -1.76
PRP22	YER013W	RIM21	P48565	533 aa		4.05	□□□□□ -1.76
PRP22	YER013W	CIR2	Q08822	631 aa		4.05	□□□□□ -1.76
PRP22	YER013W	CAT8	P39113	1433 aa		4.05	□□□□□ -1.76
PRP22	YER013W	ATH1	P48016	1211 aa		4.05	□□□□□ -1.76
PRP22	YER013W	VID30	P53076	958 aa		4.05	□□□□□ -1.76
PRP22	YER013W	HOS3	Q02959	697 aa	Known RBP	4.05	□□□□□ -1.76
PRP22	YER013W	PDS5	Q04264	1277 aa		4.05	□□□□□ -1.76
PRP22	YER013W	RAD59	Q12223	238 aa		4.05	□□□□□ -1.76
PRP22	YER013W	SPO14	P36126	1683 aa		4.05	□□□□□ -1.76
PRP22	YER013W	NUP145	P49687	1317 aa		4.05	□□□□□ -1.76
PRP22	YER013W	RDS2	P19541	446 aa	Known RBP	4.05	□□□□□ -1.76
PRP22	YER013W	CLB1	P24868	471 aa		4.05	□□□□□ -1.76
PRP22	YER013W	DEP1	P31385	405 aa		4.05	□□□□□ -1.76
PRP22	YER013W	PEP12	P32854	288 aa		4.05	□□□□□ -1.76
PRP22	YER013W	RAD3	P06839	778 aa		4.04	□□□□□ -1.76
PRP22	YER013W	TPS3	P38426	1054 aa	Known RBP	4.04	□□□□□ -1.76
PRP22	YER013W	PIB1	Q06651	286 aa		4.04	□□□□□ -1.76
PRP22	YER013W	AI4	P03878	556 aa		4.04	□□□□□ -1.76
PRP22	YER013W	TPM2	P40414	161 aa		4.04	□□□□□ -1.76
PRP22	YER013W	DNM1	P54861	757 aa		4.04	□□□□□ -1.76
PRP22	YER013W	AOS1	Q06624	347 aa		4.04	□□□□□ -1.76
PRP22	YER013W	RAD9	P14737	1309 aa		4.04	□□□□□ -1.76
PRP22	YER013W	ENO2	P00925	437 aa	Known RBP	4.04	□□□□□ -1.76
PRP22	YER013W	MPH3	P0CE00	602 aa		4.04	□□□□□ -1.76
PRP22	YER013W	RTG2	P32608	588 aa	Known RBP	4.04	□□□□□ -1.76
PRP22	YER013W	SWH1	P35845	1188 aa		4.04	□□□□□ -1.76
PRP22	YER013W	BDP1	P46678	594 aa		4.04	□□□□□ -1.76
PRP22	YER013W	MRS2	Q01926	470 aa		4.04	□□□□□ -1.76
PRP22	YER013W	YLL054C	Q12244	843 aa		4.04	□□□□□ -1.76
PRP22	YER013W	CLN1	P20437	546 aa		4.03	□□□□□ -1.76
PRP22	YER013W	OLA1	P38219	394 aa	Known RBP	4.03	□□□□□ -1.76
PRP22	YER013W	AIM20	P40451	204 aa		4.03	□□□□□ -1.76
PRP22	YER013W	RRT14	P40470	206 aa		4.03	□□□□□ -1.76
PRP22	YER013W	TFG1	P41895	735 aa	Predicted RBP	4.03	□□□□□ -1.76
PRP22	YER013W	LCD1	Q04377	747 aa		4.03	□□□□□ -1.76
PRP22	YER013W	YJU3	P28321	313 aa		4.03	□□□□□ -1.76
PRP22	YER013W	CIR1	P42940	261 aa		4.03	□□□□□ -1.76
PRP22	YER013W	YGL082W	P53155	381 aa		4.03	□□□□□ -1.76
PRP22	YER013W	NDL1	Q06568	189 aa		4.03	□□□□□ -1.76
PRP22	YER013W	RAD50	P12753	1312 aa		4.03	□□□□□ -1.76
PRP22	YER013W	ENO1	P00924	437 aa	Known RBP	4.02	□□□□□ -1.77
PRP22	YER013W	SCJ1	P25303	377 aa		4.02	□□□□□ -1.77
PRP22	YER013W	PHO87	P25360	923 aa		4.02	□□□□□ -1.77
PRP22	YER013W	CDC3	P32457	520 aa	Known RBP	4.02	□□□□□ -1.77
PRP22	YER013W	YGL015C	P33199	130 aa		4.02	□□□□□ -1.77
PRP22	YER013W	MPH1	P40562	993 aa		4.02	□□□□□ -1.77
PRP22	YER013W	YNL108C	P53929	270 aa		4.02	□□□□□ -1.77
PRP22	YER013W	HOT1	Q03213	719 aa		4.02	□□□□□ -1.77
PRP22	YER013W	AUS1	Q08409	1394 aa		4.02	□□□□□ -1.77
PRP22	YER013W	SUI2	P20459	304 aa	Known RBP	4.02	□□□□□ -1.77
PRP22	YER013W	YDJ1	P25491	409 aa	Known RBP	4.02	□□□□□ -1.77
PRP22	YER013W	YBL036C	P38197	257 aa		4.02	□□□□□ -1.77
PRP22	YER013W	TGL3	P40308	642 aa		4.02	□□□□□ -1.77
PRP22	YER013W	SEC9	P40357	651 aa		4.02	□□□□□ -1.77
PRP22	YER013W	PXR1	P53335	271 aa	Predicted RBP	4.02	□□□□□ -1.77
PRP22	YER013W	YPR204W	Q08995	1032 aa		4.02	□□□□□ -1.77
PRP22	YER013W	IAH1	P41734	238 aa		4.02	□□□□□ -1.77
PRP22	YER013W	YNL050C	P53952	270 aa		4.02	□□□□□ -1.77
PRP22	YER013W	CDC45	Q08032	650 aa		4.02	□□□□□ -1.77
PRP22	YER013W	CHC1	P22137	1653 aa	Known RBP	4.02	□□□□□ -1.77
PRP22	YER013W	PDR12	Q02785	1511 aa		4.01	□□□□□ -1.77
PRP22	YER013W	RPS0A	P32905	252 aa	Known RBP	4.01	□□□□□ -1.77
PRP22	YER013W	SLI15	P38283	698 aa		4.01	□□□□□ -1.77
PRP22	YER013W	KIC1	P38692	1080 aa		4.01	□□□□□ -1.77
PRP22	YER013W	TCD1	P38756	429 aa		4.01	□□□□□ -1.77
PRP22	YER013W	ITC1	P53125	1264 aa		4.01	□□□□□ -1.77
PRP22	YER013W	MAK16	P10962	306 aa	Predicted RBP	4.01	□□□□□ -1.77
PRP22	YER013W	KEX2	P13134	814 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms