Protein–RNA interactions for Protein: Q06568

NDL1, Nuclear distribution protein nudE homolog 1, yeastyeast

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDL1Q06568 NSR1YGR159C 1245 nt19.17■□□□□ 0.66
NDL1Q06568 YML009W-BYML009W-B 477 nt18.82■□□□□ 0.6
NDL1Q06568 NOP1YDL014W 984 nt18.21■□□□□ 0.51
NDL1Q06568 MDJ1YFL016C 1536 nt17.36■□□□□ 0.37
NDL1Q06568 YKL036CYKL036C 393 nt16.3■□□□□ 0.2
NDL1Q06568 YJL027CYJL027C 417 nt16.07■□□□□ 0.16
NDL1Q06568 SSA3YBL075C 1950 nt16■□□□□ 0.15
NDL1Q06568 SRX1YKL086W 384 nt15.84■□□□□ 0.13
NDL1Q06568 Q0297Q0297 156 nt15.71■□□□□ 0.11
NDL1Q06568 DBP2YNL112W 1641 nt15.14■□□□□ 0.01
NDL1Q06568 YBR190WYBR190W 312 nt15.01□□□□□ -0.01
NDL1Q06568 YCR051WYCR051W 669 nt15□□□□□ -0.01
NDL1Q06568 RTC3YHR087W 336 nt14.67□□□□□ -0.06
NDL1Q06568 TRN1tP(UGG)A 72 nt14.55□□□□□ -0.08
NDL1Q06568 SUF9tP(UGG)F 72 nt14.55□□□□□ -0.08
NDL1Q06568 SUF8tP(UGG)H 72 nt14.55□□□□□ -0.08
NDL1Q06568 tP(UGG)LtP(UGG)L 72 nt14.55□□□□□ -0.08
NDL1Q06568 SUF7tP(UGG)M 72 nt14.55□□□□□ -0.08
NDL1Q06568 tP(UGG)N1tP(UGG)N1 72 nt14.55□□□□□ -0.08
NDL1Q06568 tP(UGG)N2tP(UGG)N2 72 nt14.55□□□□□ -0.08
NDL1Q06568 tP(UGG)O1tP(UGG)O1 72 nt14.55□□□□□ -0.08
NDL1Q06568 SUF11tP(UGG)O2 72 nt14.55□□□□□ -0.08
NDL1Q06568 SCS3YGL126W 1143 nt14.53□□□□□ -0.08
NDL1Q06568 CCC1YLR220W 969 nt14.44□□□□□ -0.1
NDL1Q06568 RVS167YDR388W 1449 nt14.29□□□□□ -0.12
NDL1Q06568 RPP1BYDL130W 321 nt14.11□□□□□ -0.15
NDL1Q06568 YOL085CYOL085C 342 nt14.1□□□□□ -0.15
NDL1Q06568 SCJ1YMR214W 1134 nt13.94□□□□□ -0.18
NDL1Q06568 PKP1YIL042C 1185 nt13.91□□□□□ -0.18
NDL1Q06568 PUT4YOR348C 1884 nt13.91□□□□□ -0.18
NDL1Q06568 tP(UGG)O3tP(UGG)O3 72 nt13.64□□□□□ -0.23
NDL1Q06568 SHR5YOL110W 714 nt13.62□□□□□ -0.23
NDL1Q06568 SSA4YER103W 1929 nt13.58□□□□□ -0.23
NDL1Q06568 PAC11YDR488C 1602 nt13.57□□□□□ -0.24
NDL1Q06568 URN1YPR152C 1398 nt13.52□□□□□ -0.25
NDL1Q06568 ARE1YCR048W 1833 nt13.51□□□□□ -0.25
NDL1Q06568 PET122YER153C 765 nt13.48□□□□□ -0.25
NDL1Q06568 POA1YBR022W 534 nt13.48□□□□□ -0.25
NDL1Q06568 SAH1YER043C 1350 nt13.43□□□□□ -0.26
NDL1Q06568 OPI9YLR338W 858 nt13.42□□□□□ -0.26
NDL1Q06568 NVJ2YPR091C 2313 nt13.42□□□□□ -0.26
NDL1Q06568 SPT5YML010W 3192 nt13.36□□□□□ -0.27
NDL1Q06568 YHR049C-AYHR049C-A 297 nt13.36□□□□□ -0.27
NDL1Q06568 DEP1YAL013W 1218 nt13.35□□□□□ -0.27
NDL1Q06568 SCR1SCR1 522 nt13.32□□□□□ -0.28
NDL1Q06568 RPN10YHR200W 807 nt13.28□□□□□ -0.28
NDL1Q06568 BSC6YOL137W 1494 nt13.25□□□□□ -0.29
NDL1Q06568 YDJ1YNL064C 1230 nt13.23□□□□□ -0.29
NDL1Q06568 BDF1YLR399C 2061 nt13.23□□□□□ -0.29
NDL1Q06568 YNL208WYNL208W 600 nt13.15□□□□□ -0.3
NDL1Q06568 FPS1YLL043W 2010 nt13.12□□□□□ -0.31
NDL1Q06568 RRN5YLR141W 1092 nt13.07□□□□□ -0.32
NDL1Q06568 PUN1YLR414C 792 nt13.06□□□□□ -0.32
NDL1Q06568 BUD23YCR047C 828 nt13.05□□□□□ -0.32
NDL1Q06568 TAT1YBR069C 1860 nt13.01□□□□□ -0.33
NDL1Q06568 GAR1YHR089C 618 nt12.98□□□□□ -0.33
NDL1Q06568 PTC2YER089C 1395 nt12.94□□□□□ -0.34
NDL1Q06568 ATS1YAL020C 1002 nt12.89□□□□□ -0.35
NDL1Q06568 YJR018WYJR018W 363 nt12.88□□□□□ -0.35
NDL1Q06568 NAB2YGL122C 1578 nt12.87□□□□□ -0.35
NDL1Q06568 YER088W-BYER088W-B 147 nt12.8□□□□□ -0.36
NDL1Q06568 RSB1YOR049C 1065 nt12.68□□□□□ -0.38
NDL1Q06568 SSA1YAL005C 1929 nt12.63□□□□□ -0.39
NDL1Q06568 DAL1YIR027C 1383 nt12.59□□□□□ -0.39
NDL1Q06568 TIR1YER011W 765 nt12.57□□□□□ -0.4
NDL1Q06568 FPR4YLR449W 1179 nt12.57□□□□□ -0.4
NDL1Q06568 RPP2BYDR382W 333 nt12.56□□□□□ -0.4
NDL1Q06568 INM2YDR287W 879 nt12.54□□□□□ -0.4
NDL1Q06568 FIS1YIL065C 468 nt12.54□□□□□ -0.4
NDL1Q06568 MEP2YNL142W 1500 nt12.5□□□□□ -0.41
NDL1Q06568 YJR120WYJR120W 351 nt12.46□□□□□ -0.41
NDL1Q06568 PHO4YFR034C 939 nt12.45□□□□□ -0.42
NDL1Q06568 UME6YDR207C 2511 nt12.4□□□□□ -0.42
NDL1Q06568 YPS1YLR120C 1710 nt12.37□□□□□ -0.43
NDL1Q06568 YHR165W-AYHR165W-A 312 nt12.31□□□□□ -0.44
NDL1Q06568 YBL100CYBL100C 315 nt12.29□□□□□ -0.44
NDL1Q06568 DCW1YKL046C 1350 nt12.24□□□□□ -0.45
NDL1Q06568 YDR095CYDR095C 411 nt12.21□□□□□ -0.45
NDL1Q06568 YMR090WYMR090W 684 nt12.18□□□□□ -0.46
NDL1Q06568 BDH2YAL061W 1254 nt12.17□□□□□ -0.46
NDL1Q06568 EMI2YDR516C 1503 nt12.12□□□□□ -0.47
NDL1Q06568 FUN26YAL022C 1554 nt12.12□□□□□ -0.47
NDL1Q06568 ALF1YNL148C 765 nt12.1□□□□□ -0.47
NDL1Q06568 YBR220CYBR220C 1683 nt12.09□□□□□ -0.47
NDL1Q06568 SRB2YHR041C 633 nt12.08□□□□□ -0.48
NDL1Q06568 TRM9YML014W 840 nt12.07□□□□□ -0.48
NDL1Q06568 PCH2YBR186W 1695 nt12.03□□□□□ -0.48
NDL1Q06568 GUT2YIL155C 1950 nt12.02□□□□□ -0.49
NDL1Q06568 RPP2AYOL039W 321 nt12.02□□□□□ -0.49
NDL1Q06568 PST2YDR032C 597 nt12.01□□□□□ -0.49
NDL1Q06568 YDL221WYDL221W 552 nt12□□□□□ -0.49
NDL1Q06568 LSM3YLR438C-A 270 nt11.96□□□□□ -0.49
NDL1Q06568 PTP1YDL230W 1008 nt11.95□□□□□ -0.5
NDL1Q06568 SDH1YKL148C 1923 nt11.93□□□□□ -0.5
NDL1Q06568 CAC2YML102W 1407 nt11.93□□□□□ -0.5
NDL1Q06568 CCT6YDR188W 1641 nt11.92□□□□□ -0.5
NDL1Q06568 WWM1YFL010C 636 nt11.91□□□□□ -0.5
NDL1Q06568 SUF2tP(AGG)C 72 nt11.91□□□□□ -0.5
NDL1Q06568 SUF10tP(AGG)N 72 nt11.91□□□□□ -0.5
NDL1Q06568 BOR1YNL275W 1731 nt11.91□□□□□ -0.5
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms