RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 KCNK17Q96T54 332 aa10.58□□□□□ -0.72
PABPC1-220ENST00000522658 BCL2L12Q9HB09 334 aa10.58□□□□□ -0.72
PABPC1-220ENST00000522658 HCSTQ9UBK5 93 aa10.57□□□□□ -0.72
PABPC1-220ENST00000522658 COL17A1Q9UMD9 1497 aaPredicted RBP10.56□□□□□ -0.72
PABPC1-220ENST00000522658 MAGI3Q5TCQ9 1506 aa10.56□□□□□ -0.72
PABPC1-220ENST00000522658 EVI5O60447 810 aa10.55□□□□□ -0.72
PABPC1-220ENST00000522658 CADPS2Q86UW7 1296 aa10.55□□□□□ -0.72
PABPC1-220ENST00000522658 SLC4A5Q9BY07 1137 aa10.55□□□□□ -0.72
PABPC1-220ENST00000522658 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
PABPC1-220ENST00000522658 EMILIN3Q9NT22 766 aa10.54□□□□□ -0.72
PABPC1-220ENST00000522658 ABCA8O94911 1581 aa10.53□□□□□ -0.72
PABPC1-220ENST00000522658 KIF21BO75037 1637 aa10.53□□□□□ -0.72
PABPC1-220ENST00000522658 ARID3CA6NKF2 412 aa10.52□□□□□ -0.73
PABPC1-220ENST00000522658 BHMG1C9JSJ3 638 aaPredicted RBP10.5□□□□□ -0.73
PABPC1-220ENST00000522658 PTPREP23469 700 aa10.5□□□□□ -0.73
PABPC1-220ENST00000522658 PLA2G2EQ9NZK7 142 aa10.5□□□□□ -0.73
PABPC1-220ENST00000522658 MAP3K9P80192 1104 aa10.49□□□□□ -0.73
PABPC1-220ENST00000522658 KCTD12Q96CX2 325 aaKnown RBP10.49□□□□□ -0.73
PABPC1-220ENST00000522658 ZBED2Q9BTP6 218 aa10.49□□□□□ -0.73
PABPC1-220ENST00000522658 ADAM33Q9BZ11 813 aa10.49□□□□□ -0.73
PABPC1-220ENST00000522658 ARID4BQ4LE39 1312 aaPredicted RBP10.49□□□□□ -0.73
PABPC1-220ENST00000522658 P3H3Q8IVL6 736 aa10.48□□□□□ -0.73
PABPC1-220ENST00000522658 ZDHHC16Q969W1 377 aa10.48□□□□□ -0.73
PABPC1-220ENST00000522658 PHLDB1Q86UU1 1377 aa10.48□□□□□ -0.73
PABPC1-220ENST00000522658 ARAP3Q8WWN8 1544 aa10.47□□□□□ -0.73
PABPC1-220ENST00000522658 PRXQ9BXM0 1461 aa10.46□□□□□ -0.74
PABPC1-220ENST00000522658 ABCA9Q8IUA7 1624 aa10.45□□□□□ -0.74
PABPC1-220ENST00000522658 RAPGEF6Q8TEU7 1601 aa10.45□□□□□ -0.74
PABPC1-220ENST00000522658 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
PABPC1-220ENST00000522658 STAC3Q96MF2 364 aa10.45□□□□□ -0.74
PABPC1-220ENST00000522658 PCDHGA10Q9Y5H3 936 aa10.45□□□□□ -0.74
PABPC1-220ENST00000522658 NEO1Q92859 1461 aa10.44□□□□□ -0.74
PABPC1-220ENST00000522658 CFAP74Q9C0B2 1584 aa10.43□□□□□ -0.74
PABPC1-220ENST00000522658 ATP10BO94823 1461 aa10.43□□□□□ -0.74
PABPC1-220ENST00000522658 PTPRMP28827 1452 aa10.43□□□□□ -0.74
PABPC1-220ENST00000522658 RANGAP1P46060 587 aaPredicted RBP10.43□□□□□ -0.74
PABPC1-220ENST00000522658 FBXO41Q8TF61 875 aa10.42□□□□□ -0.74
PABPC1-220ENST00000522658 POGZQ7Z3K3 1410 aa10.41□□□□□ -0.74
PABPC1-220ENST00000522658 RAPGEF3O95398 923 aa10.41□□□□□ -0.74
PABPC1-220ENST00000522658 ARHGEF40Q8TER5 1519 aa10.41□□□□□ -0.74
PABPC1-220ENST00000522658 PCF11O94913 1555 aaKnown RBP10.4□□□□□ -0.74
PABPC1-220ENST00000522658 SAMD9Q5K651 1589 aa10.4□□□□□ -0.74
PABPC1-220ENST00000522658 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
PABPC1-220ENST00000522658 MADDQ8WXG6 1647 aa10.4□□□□□ -0.75
PABPC1-220ENST00000522658 BCORL1Q5H9F3 1711 aa10.39□□□□□ -0.75
PABPC1-220ENST00000522658 ADAMTSL3P82987 1691 aa10.39□□□□□ -0.75
PABPC1-220ENST00000522658 FANCAO15360 1455 aa10.39□□□□□ -0.75
PABPC1-220ENST00000522658 DENND4BO75064 1496 aaPredicted RBP10.39□□□□□ -0.75
PABPC1-220ENST00000522658 PPP1R3GB7ZBB8 358 aa10.39□□□□□ -0.75
PABPC1-220ENST00000522658 PHF14O94880 888 aa10.39□□□□□ -0.75
PABPC1-220ENST00000522658 THSD4Q6ZMP0 1018 aa10.39□□□□□ -0.75
PABPC1-220ENST00000522658 PLEKHD1A6NEE1 506 aa10.38□□□□□ -0.75
PABPC1-220ENST00000522658 EEA1Q15075 1411 aa10.38□□□□□ -0.75
PABPC1-220ENST00000522658 AKNAQ7Z591 1439 aa10.38□□□□□ -0.75
PABPC1-220ENST00000522658 RIMS1Q86UR5 1692 aaKnown RBP10.38□□□□□ -0.75
PABPC1-220ENST00000522658 COL9A1P20849 921 aa10.37□□□□□ -0.75
PABPC1-220ENST00000522658 FHOD3Q2V2M9 1422 aa10.37□□□□□ -0.75
PABPC1-220ENST00000522658 TYW1BQ6NUM6 668 aa10.37□□□□□ -0.75
PABPC1-220ENST00000522658 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
PABPC1-220ENST00000522658 EFCAB5A4FU69 1503 aa10.37□□□□□ -0.75
PABPC1-220ENST00000522658 FRMPD1Q5SYB0 1578 aa10.36□□□□□ -0.75
PABPC1-220ENST00000522658 PTPN5P54829 565 aa10.36□□□□□ -0.75
PABPC1-220ENST00000522658 FBXW7Q969H0 707 aa10.36□□□□□ -0.75
PABPC1-220ENST00000522658 NUP153P49790 1475 aaKnown RBP10.36□□□□□ -0.75
PABPC1-220ENST00000522658 ZFYVE16Q7Z3T8 1539 aa10.35□□□□□ -0.75
PABPC1-220ENST00000522658 DPYSL4O14531 572 aa10.35□□□□□ -0.75
PABPC1-220ENST00000522658 PROX2Q3B8N5 592 aa10.34□□□□□ -0.75
PABPC1-220ENST00000522658 WNT2BQ93097 391 aa10.34□□□□□ -0.75
PABPC1-220ENST00000522658 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
PABPC1-220ENST00000522658 RABGEF1Q9UJ41 708 aa10.34□□□□□ -0.75
PABPC1-220ENST00000522658 LMTK3Q96Q04 1460 aa10.33□□□□□ -0.76
PABPC1-220ENST00000522658 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
PABPC1-220ENST00000522658 IFFO2Q5TF58 517 aa10.32□□□□□ -0.76
PABPC1-220ENST00000522658 ATP1B4Q9UN42 357 aaPredicted RBP10.32□□□□□ -0.76
PABPC1-220ENST00000522658 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
PABPC1-220ENST00000522658 MLECQ14165 292 aa10.31□□□□□ -0.76
PABPC1-220ENST00000522658 EPAS1Q99814 870 aa10.31□□□□□ -0.76
PABPC1-220ENST00000522658 ZMYM4Q5VZL5 1548 aa10.31□□□□□ -0.76
PABPC1-220ENST00000522658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.31□□□□□ -0.76
PABPC1-220ENST00000522658 TTC37Q6PGP7 1564 aa10.31□□□□□ -0.76
PABPC1-220ENST00000522658 MAGI2Q86UL8 1455 aa10.3□□□□□ -0.76
PABPC1-220ENST00000522658 FER1L4A9Z1Z3 1794 aa10.3□□□□□ -0.76
PABPC1-220ENST00000522658 C6orf132Q5T0Z8 1188 aa10.3□□□□□ -0.76
PABPC1-220ENST00000522658 ONECUT3O60422 494 aaPredicted RBP10.29□□□□□ -0.76
PABPC1-220ENST00000522658 CDK11AQ9UQ88 783 aaPredicted RBP10.29□□□□□ -0.76
PABPC1-220ENST00000522658 HECW1Q76N89 1606 aa10.29□□□□□ -0.76
PABPC1-220ENST00000522658 HSPA2P54652 639 aa10.28□□□□□ -0.76
PABPC1-220ENST00000522658 CDK13Q14004 1512 aaKnown RBP10.28□□□□□ -0.76
PABPC1-220ENST00000522658 CLIP1P30622 1438 aa10.27□□□□□ -0.77
PABPC1-220ENST00000522658 C9orf84Q5VXU9 1444 aa10.27□□□□□ -0.77
PABPC1-220ENST00000522658 SCAPERQ9BY12 1400 aa10.27□□□□□ -0.77
PABPC1-220ENST00000522658 KIF14Q15058 1648 aa10.27□□□□□ -0.77
PABPC1-220ENST00000522658 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
PABPC1-220ENST00000522658 ESF1Q9H501 851 aaKnown RBP10.27□□□□□ -0.77
PABPC1-220ENST00000522658 FMN1Q68DA7 1419 aa10.26□□□□□ -0.77
PABPC1-220ENST00000522658 YEATS2Q9ULM3 1422 aa10.26□□□□□ -0.77
PABPC1-220ENST00000522658 UBTFP17480 764 aaKnown RBP10.26□□□□□ -0.77
PABPC1-220ENST00000522658 PDIA6Q15084 440 aa10.26□□□□□ -0.77
PABPC1-220ENST00000522658 LAPTM4BQ86VI4 370 aa10.26□□□□□ -0.77
PABPC1-220ENST00000522658 MYO5CQ9NQX4 1742 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms