RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 CARMIL1Q5VZK9 1371 aa9.26□□□□□ -0.93
CMSS1-203ENST00000478909 THSD4Q6ZMP0 1018 aa9.26□□□□□ -0.93
CMSS1-203ENST00000478909 WNT2BQ93097 391 aa9.26□□□□□ -0.93
CMSS1-203ENST00000478909 MLLT3P42568 568 aaPredicted RBP9.25□□□□□ -0.93
CMSS1-203ENST00000478909 PTPN5P54829 565 aa9.25□□□□□ -0.93
CMSS1-203ENST00000478909 P3H3Q8IVL6 736 aa9.25□□□□□ -0.93
CMSS1-203ENST00000478909 TSKSQ9UJT2 592 aa9.25□□□□□ -0.93
CMSS1-203ENST00000478909 ARAP1Q96P48 1450 aa9.25□□□□□ -0.93
CMSS1-203ENST00000478909 ABCA5Q8WWZ7 1642 aa9.24□□□□□ -0.93
CMSS1-203ENST00000478909 FHAD1B1AJZ9 1412 aa9.24□□□□□ -0.93
CMSS1-203ENST00000478909 LAPTM4BQ86VI4 370 aa9.24□□□□□ -0.93
CMSS1-203ENST00000478909 CDHR5Q9HBB8 845 aa9.24□□□□□ -0.93
CMSS1-203ENST00000478909 SEPT9Q9UHD8 586 aaPredicted RBP9.24□□□□□ -0.93
CMSS1-203ENST00000478909 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
CMSS1-203ENST00000478909 URB2Q14146 1524 aaKnown RBP9.22□□□□□ -0.93
CMSS1-203ENST00000478909 CERKQ8TCT0 537 aa9.22□□□□□ -0.93
CMSS1-203ENST00000478909 CDCA7LQ96GN5 454 aa9.22□□□□□ -0.93
CMSS1-203ENST00000478909 CTTNBP2Q8WZ74 1663 aa9.22□□□□□ -0.93
CMSS1-203ENST00000478909 ARHGAP35Q9NRY4 1499 aa9.21□□□□□ -0.93
CMSS1-203ENST00000478909 NESP48681 1621 aa9.21□□□□□ -0.93
CMSS1-203ENST00000478909 PRSS12P56730 875 aa9.21□□□□□ -0.94
CMSS1-203ENST00000478909 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
CMSS1-203ENST00000478909 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.94
CMSS1-203ENST00000478909 PACS2Q86VP3 889 aa9.2□□□□□ -0.94
CMSS1-203ENST00000478909 ANKK1Q8NFD2 765 aa9.2□□□□□ -0.94
CMSS1-203ENST00000478909 PLA2G2EQ9NZK7 142 aa9.2□□□□□ -0.94
CMSS1-203ENST00000478909 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
CMSS1-203ENST00000478909 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
CMSS1-203ENST00000478909 FAM98CQ17RN3 349 aaKnown RBP9.19□□□□□ -0.94
CMSS1-203ENST00000478909 NPDC1Q9NQX5 325 aaPredicted RBP9.19□□□□□ -0.94
CMSS1-203ENST00000478909 MRC2Q9UBG0 1479 aa9.19□□□□□ -0.94
CMSS1-203ENST00000478909 BCAMP50895 628 aa9.18□□□□□ -0.94
CMSS1-203ENST00000478909 TARBP1Q13395 1621 aaKnown RBP9.18□□□□□ -0.94
CMSS1-203ENST00000478909 GAPVD1Q14C86 1478 aa9.17□□□□□ -0.94
CMSS1-203ENST00000478909 FYCO1Q9BQS8 1478 aa9.17□□□□□ -0.94
CMSS1-203ENST00000478909 SOWAHBA6NEL2 793 aa9.17□□□□□ -0.94
CMSS1-203ENST00000478909 C3orf80F5H4A9 247 aa9.17□□□□□ -0.94
CMSS1-203ENST00000478909 SEMA3EO15041 775 aa9.17□□□□□ -0.94
CMSS1-203ENST00000478909 KDM2AQ9Y2K7 1162 aa9.17□□□□□ -0.94
CMSS1-203ENST00000478909 CFAP43Q8NDM7 1665 aa9.16□□□□□ -0.94
CMSS1-203ENST00000478909 TIAM1Q13009 1591 aa9.16□□□□□ -0.94
CMSS1-203ENST00000478909 THOC2Q8NI27 1593 aaKnown RBP9.16□□□□□ -0.94
CMSS1-203ENST00000478909 RRBP1Q9P2E9 1410 aaKnown RBP9.16□□□□□ -0.94
CMSS1-203ENST00000478909 CLSPNQ9HAW4 1339 aa9.16□□□□□ -0.94
CMSS1-203ENST00000478909 SMAPO00193 183 aa9.16□□□□□ -0.94
CMSS1-203ENST00000478909 RBM27Q9P2N5 1060 aaKnown RBP9.16□□□□□ -0.94
CMSS1-203ENST00000478909 WDR62O43379 1518 aa9.15□□□□□ -0.94
CMSS1-203ENST00000478909 RAD54L2Q9Y4B4 1467 aa9.15□□□□□ -0.94
CMSS1-203ENST00000478909 FMN1Q68DA7 1419 aa9.15□□□□□ -0.94
CMSS1-203ENST00000478909 SAMD9Q5K651 1589 aa9.14□□□□□ -0.95
CMSS1-203ENST00000478909 IFT140Q96RY7 1462 aa9.14□□□□□ -0.95
CMSS1-203ENST00000478909 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
CMSS1-203ENST00000478909 PADI6Q6TGC4 694 aa9.13□□□□□ -0.95
CMSS1-203ENST00000478909 TTC13Q8NBP0 860 aa9.13□□□□□ -0.95
CMSS1-203ENST00000478909 CCER1Q8TC90 406 aaPredicted RBP9.13□□□□□ -0.95
CMSS1-203ENST00000478909 TATDN2Q93075 761 aa9.13□□□□□ -0.95
CMSS1-203ENST00000478909 PNMA3Q9UL41 463 aa9.13□□□□□ -0.95
CMSS1-203ENST00000478909 PBRM1Q86U86 1689 aa9.13□□□□□ -0.95
CMSS1-203ENST00000478909 CASKIN1Q8WXD9 1431 aa9.13□□□□□ -0.95
CMSS1-203ENST00000478909 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
CMSS1-203ENST00000478909 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.12□□□□□ -0.95
CMSS1-203ENST00000478909 PTGDRQ13258 359 aa9.11□□□□□ -0.95
CMSS1-203ENST00000478909 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
CMSS1-203ENST00000478909 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
CMSS1-203ENST00000478909 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.11□□□□□ -0.95
CMSS1-203ENST00000478909 ADAMTS12P58397 1594 aa9.1□□□□□ -0.95
CMSS1-203ENST00000478909 GRIN2BQ13224 1484 aa9.09□□□□□ -0.95
CMSS1-203ENST00000478909 LRRC9Q6ZRR7 1453 aa9.09□□□□□ -0.95
CMSS1-203ENST00000478909 TESPA1A2RU30 521 aaPredicted RBP9.09□□□□□ -0.95
CMSS1-203ENST00000478909 SAMD7Q7Z3H4 446 aa9.09□□□□□ -0.95
CMSS1-203ENST00000478909 HPS5Q9UPZ3 1129 aa9.09□□□□□ -0.95
CMSS1-203ENST00000478909 PCF11O94913 1555 aaKnown RBP9.08□□□□□ -0.96
CMSS1-203ENST00000478909 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
CMSS1-203ENST00000478909 NYAP1Q6ZVC0 841 aa9.08□□□□□ -0.96
CMSS1-203ENST00000478909 PPARGC1BQ86YN6 1023 aaKnown RBP9.08□□□□□ -0.96
CMSS1-203ENST00000478909 TSR3Q9UJK0 312 aaKnown RBP9.08□□□□□ -0.96
CMSS1-203ENST00000478909 CCNB3Q8WWL7 1395 aa9.08□□□□□ -0.96
CMSS1-203ENST00000478909 VSIG10Q8N0Z9 540 aa9.07□□□□□ -0.96
CMSS1-203ENST00000478909 CCDC18Q5T9S5 1454 aa9.06□□□□□ -0.96
CMSS1-203ENST00000478909 IQGAP2Q13576 1575 aa9.06□□□□□ -0.96
CMSS1-203ENST00000478909 SNAPC4Q5SXM2 1469 aa9.05□□□□□ -0.96
CMSS1-203ENST00000478909 IFFO2Q5TF58 517 aa9.05□□□□□ -0.96
CMSS1-203ENST00000478909 EYA1Q99502 592 aa9.05□□□□□ -0.96
CMSS1-203ENST00000478909 MAGI1Q96QZ7 1491 aaPredicted RBP9.04□□□□□ -0.96
CMSS1-203ENST00000478909 TDRD9Q8NDG6 1382 aaKnown RBP9.04□□□□□ -0.96
CMSS1-203ENST00000478909 UGGT2Q9NYU1 1516 aa9.04□□□□□ -0.96
CMSS1-203ENST00000478909 ITGBL1O95965 494 aaPredicted RBP9.03□□□□□ -0.96
CMSS1-203ENST00000478909 PPP4CP60510 307 aa9.03□□□□□ -0.96
CMSS1-203ENST00000478909 RBM26Q5T8P6 1007 aaKnown RBP9.03□□□□□ -0.96
CMSS1-203ENST00000478909 HECW1Q76N89 1606 aa9.02□□□□□ -0.96
CMSS1-203ENST00000478909 EHBP1L1Q8N3D4 1523 aa9.02□□□□□ -0.97
CMSS1-203ENST00000478909 FCHSD2O94868 740 aa9.02□□□□□ -0.97
CMSS1-203ENST00000478909 SMYD5Q6GMV2 418 aa9.02□□□□□ -0.97
CMSS1-203ENST00000478909 HDGFP51858 240 aaKnown RBP9.01□□□□□ -0.97
CMSS1-203ENST00000478909 FHOD3Q2V2M9 1422 aa9.01□□□□□ -0.97
CMSS1-203ENST00000478909 ERCC6Q03468 1493 aa9.01□□□□□ -0.97
CMSS1-203ENST00000478909 ACIN1Q9UKV3 1341 aaKnown RBP9.01□□□□□ -0.97
CMSS1-203ENST00000478909 KIAA0586Q9BVV6 1533 aa9□□□□□ -0.97
CMSS1-203ENST00000478909 EIF4G3O43432 1585 aaKnown RBP9□□□□□ -0.97
CMSS1-203ENST00000478909 RNF40O75150 1001 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms