RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
CMSS1-203ENST00000478909 CHIC1Q5VXU3 224 aa21.54■■□□□ 1.04
CMSS1-203ENST00000478909 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
CMSS1-203ENST00000478909 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
CMSS1-203ENST00000478909 FOXD1Q16676 465 aa17.74■□□□□ 0.43
CMSS1-203ENST00000478909 PLPPR3Q6T4P5 718 aa17.32■□□□□ 0.36
CMSS1-203ENST00000478909 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
CMSS1-203ENST00000478909 ADRA2BP18089 450 aa16.77■□□□□ 0.28
CMSS1-203ENST00000478909 PIAS4Q8N2W9 510 aaPredicted RBP16.63■□□□□ 0.25
CMSS1-203ENST00000478909 MSH5O43196 834 aa16.47■□□□□ 0.23
CMSS1-203ENST00000478909 POTEDQ86YR6 584 aa15.65■□□□□ 0.1
CMSS1-203ENST00000478909 MAPK8IP2Q13387 824 aaPredicted RBP15.33■□□□□ 0.04
CMSS1-203ENST00000478909 SCAF1Q9H7N4 1312 aaKnown RBP15.31■□□□□ 0.04
CMSS1-203ENST00000478909 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
CMSS1-203ENST00000478909 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
CMSS1-203ENST00000478909 CNKSR2Q8WXI2 1034 aa14.87□□□□□ -0.03
CMSS1-203ENST00000478909 HOXD11P31277 338 aaPredicted RBP14.71□□□□□ -0.05
CMSS1-203ENST00000478909 NCBP3Q53F19 620 aaKnown RBP14.7□□□□□ -0.06
CMSS1-203ENST00000478909 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
CMSS1-203ENST00000478909 DCAF8L1A6NGE4 600 aa14.51□□□□□ -0.09
CMSS1-203ENST00000478909 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
CMSS1-203ENST00000478909 KCNA4P22459 653 aa14.49□□□□□ -0.09
CMSS1-203ENST00000478909 DNAJC5BQ9UF47 199 aa14.14□□□□□ -0.15
CMSS1-203ENST00000478909 RNF39Q9H2S5 420 aa14.11□□□□□ -0.15
CMSS1-203ENST00000478909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14□□□□□ -0.173e-6■■■■□ 20.2
CMSS1-203ENST00000478909 CACNB1Q02641 598 aaPredicted RBP13.98□□□□□ -0.17
CMSS1-203ENST00000478909 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
CMSS1-203ENST00000478909 SLC4A2P04920 1241 aa13.81□□□□□ -0.2
CMSS1-203ENST00000478909 U3KPZ7 1027 aaPredicted RBP13.76□□□□□ -0.21
CMSS1-203ENST00000478909 SLC4A1APQ9BWU0 796 aaKnown RBP13.71□□□□□ -0.21
CMSS1-203ENST00000478909 SPINK5Q9NQ38 1064 aaPredicted RBP13.49□□□□□ -0.25
CMSS1-203ENST00000478909 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.43□□□□□ -0.26
CMSS1-203ENST00000478909 CAPN15O75808 1086 aa13.43□□□□□ -0.26
CMSS1-203ENST00000478909 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
CMSS1-203ENST00000478909 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
CMSS1-203ENST00000478909 MYCNP04198 464 aaPredicted RBP13.4□□□□□ -0.26
CMSS1-203ENST00000478909 SAMD1Q6SPF0 538 aaPredicted RBP13.38□□□□□ -0.27
CMSS1-203ENST00000478909 APLP2Q06481 763 aa13.36□□□□□ -0.27
CMSS1-203ENST00000478909 ZBTB22O15209 634 aa13.34□□□□□ -0.27
CMSS1-203ENST00000478909 DSG3P32926 999 aa13.3□□□□□ -0.28
CMSS1-203ENST00000478909 TRHP20396 242 aaPredicted RBP13.28□□□□□ -0.28
CMSS1-203ENST00000478909 ZNF219Q9P2Y4 722 aaPredicted RBP13.26□□□□□ -0.29
CMSS1-203ENST00000478909 NISCHQ9Y2I1 1504 aa13.21□□□□□ -0.29
CMSS1-203ENST00000478909 ABCB7O75027 752 aa13.15□□□□□ -0.3
CMSS1-203ENST00000478909 ATF5Q9Y2D1 282 aaPredicted RBP13.1□□□□□ -0.31
CMSS1-203ENST00000478909 POLA2Q14181 598 aa13□□□□□ -0.33
CMSS1-203ENST00000478909 ATXN8OSP0DMR3 200 aa12.97□□□□□ -0.33
CMSS1-203ENST00000478909 CSRNP3Q8WYN3 585 aa12.96□□□□□ -0.33
CMSS1-203ENST00000478909 EHMT2Q96KQ7 1210 aa12.93□□□□□ -0.34
CMSS1-203ENST00000478909 ZBTB12Q9Y330 459 aaPredicted RBP12.72□□□□□ -0.37
CMSS1-203ENST00000478909 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
CMSS1-203ENST00000478909 OSCARQ8IYS5 282 aa12.58□□□□□ -0.4
CMSS1-203ENST00000478909 FBLN2P98095 1184 aa12.53□□□□□ -0.4
CMSS1-203ENST00000478909 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
CMSS1-203ENST00000478909 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
CMSS1-203ENST00000478909 SPDYE2BA6NHP3 402 aa12.37□□□□□ -0.43
CMSS1-203ENST00000478909 SPDYE6P0CI01 402 aa12.37□□□□□ -0.43
CMSS1-203ENST00000478909 SPDYE2Q495Y8 402 aa12.37□□□□□ -0.43
CMSS1-203ENST00000478909 REM2Q8IYK8 340 aaPredicted RBP12.33□□□□□ -0.44
CMSS1-203ENST00000478909 POTEHQ6S545 545 aa12.31□□□□□ -0.44
CMSS1-203ENST00000478909 CHRDL2Q6WN34 429 aa12.29□□□□□ -0.44
CMSS1-203ENST00000478909 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
CMSS1-203ENST00000478909 SSUH2Q9Y2M2 353 aa12.25□□□□□ -0.45
CMSS1-203ENST00000478909 PITPNM1O00562 1244 aa12.2□□□□□ -0.46
CMSS1-203ENST00000478909 PABPN1Q86U42 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
CMSS1-203ENST00000478909 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
CMSS1-203ENST00000478909 PIP4P2Q8N4L2 257 aa12.07□□□□□ -0.48
CMSS1-203ENST00000478909 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
CMSS1-203ENST00000478909 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
CMSS1-203ENST00000478909 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
CMSS1-203ENST00000478909 PRR29P0C7W0 189 aa11.9□□□□□ -0.5
CMSS1-203ENST00000478909 PRKAR2AP13861 404 aaKnown RBP11.88□□□□□ -0.51
CMSS1-203ENST00000478909 CHADLQ6NUI6 762 aa11.82□□□□□ -0.52
CMSS1-203ENST00000478909 STAG3Q9UJ98 1225 aa11.81□□□□□ -0.52
CMSS1-203ENST00000478909 PROM2Q8N271 834 aa11.8□□□□□ -0.52
CMSS1-203ENST00000478909 HAX1O00165 279 aa11.76□□□□□ -0.53
CMSS1-203ENST00000478909 FKBP8Q14318 412 aa11.73□□□□□ -0.53
CMSS1-203ENST00000478909 EVX2Q03828 476 aa11.67□□□□□ -0.54
CMSS1-203ENST00000478909 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
CMSS1-203ENST00000478909 CREBZFQ9NS37 354 aa11.67□□□□□ -0.54
CMSS1-203ENST00000478909 FARP1Q9Y4F1 1045 aaPredicted RBP11.66□□□□□ -0.54
CMSS1-203ENST00000478909 C19orf67A6NJJ6 358 aa11.64□□□□□ -0.55
CMSS1-203ENST00000478909 CCDC180Q9P1Z9 1646 aa11.54□□□□□ -0.56
CMSS1-203ENST00000478909 CD44P16070 742 aaKnown RBP11.52□□□□□ -0.57
CMSS1-203ENST00000478909 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
CMSS1-203ENST00000478909 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
CMSS1-203ENST00000478909 MIER1Q8N108 512 aa11.44□□□□□ -0.58
CMSS1-203ENST00000478909 GABBR2O75899 941 aa11.4□□□□□ -0.58
CMSS1-203ENST00000478909 PLEKHG5O94827 1062 aa11.39□□□□□ -0.59
CMSS1-203ENST00000478909 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
CMSS1-203ENST00000478909 ZRANB1Q9UGI0 708 aa11.39□□□□□ -0.59
CMSS1-203ENST00000478909 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
CMSS1-203ENST00000478909 ZNF579Q8NAF0 562 aaKnown RBP11.35□□□□□ -0.59
CMSS1-203ENST00000478909 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
CMSS1-203ENST00000478909 CLCN6P51797 869 aa11.29□□□□□ -0.6
CMSS1-203ENST00000478909 PHF12Q96QT6 1004 aa11.27□□□□□ -0.61
CMSS1-203ENST00000478909 TSPYL2Q9H2G4 693 aaPredicted RBP11.27□□□□□ -0.61
CMSS1-203ENST00000478909 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
CMSS1-203ENST00000478909 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
CMSS1-203ENST00000478909 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms