RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 TRPM1Q7Z4N2 1603 aa13.61□□□□□ -0.23
USP11-203ENST00000377080 CARD11Q9BXL7 1154 aa13.61□□□□□ -0.23
USP11-203ENST00000377080 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
USP11-203ENST00000377080 EIF2AK4Q9P2K8 1649 aaKnown RBP13.61□□□□□ -0.23
USP11-203ENST00000377080 AGLP35573 1532 aa13.6□□□□□ -0.23
USP11-203ENST00000377080 PIP4K2BP78356 416 aa13.6□□□□□ -0.23
USP11-203ENST00000377080 KIDINS220Q9ULH0 1771 aa13.6□□□□□ -0.23
USP11-203ENST00000377080 MLH3Q9UHC1 1453 aa13.6□□□□□ -0.23
USP11-203ENST00000377080 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
USP11-203ENST00000377080 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
USP11-203ENST00000377080 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
USP11-203ENST00000377080 CCDC144AA2RUR9 1427 aa13.57□□□□□ -0.24
USP11-203ENST00000377080 ERBINQ96RT1 1412 aa13.57□□□□□ -0.24
USP11-203ENST00000377080 MROH2AA6NES4 1674 aa13.57□□□□□ -0.24
USP11-203ENST00000377080 HNRNPMP52272 730 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP11-203ENST00000377080 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
USP11-203ENST00000377080 ZNF142P52746 1687 aaPredicted RBP13.56□□□□□ -0.24
USP11-203ENST00000377080 NPATQ14207 1427 aa13.56□□□□□ -0.24
USP11-203ENST00000377080 MYO3AQ8NEV4 1616 aa13.56□□□□□ -0.24
USP11-203ENST00000377080 PLA2R1Q13018 1463 aa13.55□□□□□ -0.24
USP11-203ENST00000377080 PRDM15P57071 1507 aaPredicted RBP13.55□□□□□ -0.24
USP11-203ENST00000377080 SYCP2Q9BX26 1530 aa13.55□□□□□ -0.24
USP11-203ENST00000377080 TOM1O60784 492 aa13.55□□□□□ -0.24
USP11-203ENST00000377080 TMC1Q8TDI8 760 aa13.55□□□□□ -0.24
USP11-203ENST00000377080 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
USP11-203ENST00000377080 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
USP11-203ENST00000377080 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
USP11-203ENST00000377080 NEURL4Q96JN8 1562 aa13.53□□□□□ -0.24
USP11-203ENST00000377080 PPP6R1Q9UPN7 881 aa13.52□□□□□ -0.25
USP11-203ENST00000377080 RTEL1-TNFRSF6BF6WH68 1400 aa13.52□□□□□ -0.25
USP11-203ENST00000377080 CEP170BQ9Y4F5 1589 aaPredicted RBP13.52□□□□□ -0.25
USP11-203ENST00000377080 NLRP13Q86W25 1043 aa13.51□□□□□ -0.25
USP11-203ENST00000377080 CLTCQ00610 1675 aaKnown RBP13.5□□□□□ -0.25
USP11-203ENST00000377080 CPS1P31327 1500 aa13.5□□□□□ -0.25
USP11-203ENST00000377080 ZMYM3Q14202 1370 aa13.5□□□□□ -0.25
USP11-203ENST00000377080 PER1O15534 1290 aaPredicted RBP13.5□□□□□ -0.25
USP11-203ENST00000377080 ZNF326Q5BKZ1 582 aaKnown RBP13.5□□□□□ -0.25
USP11-203ENST00000377080 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
USP11-203ENST00000377080 ATP7AQ04656 1500 aa13.49□□□□□ -0.25
USP11-203ENST00000377080 A2MP01023 1474 aa13.49□□□□□ -0.25
USP11-203ENST00000377080 SLC24A1O60721 1099 aa13.48□□□□□ -0.25
USP11-203ENST00000377080 RNF17Q9BXT8 1623 aaKnown RBP13.48□□□□□ -0.25
USP11-203ENST00000377080 SPAG9O60271 1321 aaKnown RBP13.47□□□□□ -0.25
USP11-203ENST00000377080 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.25
USP11-203ENST00000377080 TESK2Q96S53 571 aa13.46□□□□□ -0.25
USP11-203ENST00000377080 KDM2AQ9Y2K7 1162 aa13.46□□□□□ -0.25
USP11-203ENST00000377080 KIAA1210Q9ULL0 1709 aa13.45□□□□□ -0.26
USP11-203ENST00000377080 SENP3Q9H4L4 574 aaPredicted RBP13.45□□□□□ -0.26
USP11-203ENST00000377080 DEPDC5O75140 1603 aa13.44□□□□□ -0.26
USP11-203ENST00000377080 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
USP11-203ENST00000377080 TMF1P82094 1093 aa13.44□□□□□ -0.26
USP11-203ENST00000377080 MSH5O43196 834 aa13.43□□□□□ -0.26
USP11-203ENST00000377080 BLMP54132 1417 aaPredicted RBP13.43□□□□□ -0.26
USP11-203ENST00000377080 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
USP11-203ENST00000377080 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
USP11-203ENST00000377080 CEP152O94986 1710 aa13.42□□□□□ -0.26
USP11-203ENST00000377080 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
USP11-203ENST00000377080 TRPM2O94759 1503 aa13.42□□□□□ -0.26
USP11-203ENST00000377080 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
USP11-203ENST00000377080 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
USP11-203ENST00000377080 POLR3GLQ9BT43 218 aa13.41□□□□□ -0.26
USP11-203ENST00000377080 RGS17Q9UGC6 210 aaPredicted RBP13.41□□□□□ -0.26
USP11-203ENST00000377080 SPHKAPQ2M3C7 1700 aa13.41□□□□□ -0.26
USP11-203ENST00000377080 A2ML1A8K2U0 1454 aa13.4□□□□□ -0.26
USP11-203ENST00000377080 VWDEQ8N2E2 1590 aa13.4□□□□□ -0.26
USP11-203ENST00000377080 TET3O43151 1660 aa13.4□□□□□ -0.26
USP11-203ENST00000377080 NBPF1Q3BBV0 1214 aa13.39□□□□□ -0.27
USP11-203ENST00000377080 RRP1P56182 461 aaKnown RBP13.38□□□□□ -0.27
USP11-203ENST00000377080 GGT6Q6P531 493 aa13.38□□□□□ -0.27
USP11-203ENST00000377080 RCAN3Q9UKA8 241 aa13.38□□□□□ -0.27
USP11-203ENST00000377080 SYNMO15061 1565 aa13.37□□□□□ -0.27
USP11-203ENST00000377080 TCERG1O14776 1098 aaKnown RBP13.36□□□□□ -0.27
USP11-203ENST00000377080 MS4A1P11836 297 aa13.36□□□□□ -0.27
USP11-203ENST00000377080 NGEFQ8N5V2 710 aa13.36□□□□□ -0.27
USP11-203ENST00000377080 SCAF11Q99590 1463 aaKnown RBP13.36□□□□□ -0.27
USP11-203ENST00000377080 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
USP11-203ENST00000377080 SETD1AO15047 1707 aaKnown RBP13.34□□□□□ -0.27
USP11-203ENST00000377080 RGL3Q3MIN7 710 aa13.34□□□□□ -0.27
USP11-203ENST00000377080 PANK3Q9H999 370 aa13.34□□□□□ -0.27
USP11-203ENST00000377080 KANK1Q14678 1352 aa13.33□□□□□ -0.27
USP11-203ENST00000377080 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.33□□□□□ -0.281e-6■■■□□ 16.6
USP11-203ENST00000377080 EIF3AQ14152 1382 aaKnown RBP13.32□□□□□ -0.28
USP11-203ENST00000377080 STRCP1A6NGW2 1772 aa13.32□□□□□ -0.28
USP11-203ENST00000377080 PIK3C2GO75747 1445 aa13.32□□□□□ -0.28
USP11-203ENST00000377080 MYOM2P54296 1465 aa13.32□□□□□ -0.28
USP11-203ENST00000377080 POTEAQ6S8J7 498 aa13.31□□□□□ -0.28
USP11-203ENST00000377080 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
USP11-203ENST00000377080 ASXL1Q8IXJ9 1541 aa13.3□□□□□ -0.28
USP11-203ENST00000377080 LRRC7Q96NW7 1537 aa13.3□□□□□ -0.28
USP11-203ENST00000377080 NPHP4O75161 1426 aaPredicted RBP13.3□□□□□ -0.28
USP11-203ENST00000377080 LMTK2Q8IWU2 1503 aa13.29□□□□□ -0.28
USP11-203ENST00000377080 CLTCL1P53675 1640 aa13.29□□□□□ -0.28
USP11-203ENST00000377080 ANP32AP39687 249 aaKnown RBP13.29□□□□□ -0.28
USP11-203ENST00000377080 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
USP11-203ENST00000377080 SBNO2Q9Y2G9 1366 aa13.29□□□□□ -0.28
USP11-203ENST00000377080 KIF3BO15066 747 aa13.28□□□□□ -0.28
USP11-203ENST00000377080 NOP58Q9Y2X3 529 aaKnown RBP13.28□□□□□ -0.28
USP11-203ENST00000377080 KNSTRNQ9Y448 316 aa13.28□□□□□ -0.28
USP11-203ENST00000377080 TNRQ92752 1358 aa13.28□□□□□ -0.28
USP11-203ENST00000377080 MED14O60244 1454 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms