RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 Zscan21Q07231 555 aa8.01□□□□□ -1.13
Ube4a-201ENSMUST00000117506 BccipQ9CWI3 316 aa8.01□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Pik3c2gO70167 1506 aa8.01□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Sin3aQ60520 1274 aaKnown RBP8.01□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Tpm2P58774 284 aa8□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Atp6v1dP57746 247 aa8□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Rprd2Q6NXI6 1469 aaKnown RBP8□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Tpm4Q6IRU2 248 aa8□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Dnai1Q8C0M8 701 aa8□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Tcerg1Q8CGF7 1100 aaKnown RBP8□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Asxl1P59598 1514 aa8□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Zfp644E9QA22 1323 aa7.99□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Prex2Q3LAC4 1598 aa7.99□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Ylpm1Q9R0I7 1386 aaKnown RBP7.99□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Arhgef11Q68FM7 1552 aa7.99□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Plekhg5Q66T02 1073 aa7.99□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Chaf1aQ9QWF0 911 aa7.99□□□□□ -1.13
Ube4a-201ENSMUST00000117506 1700123L14RikQ3V2K7 440 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Rwdd1Q9CQK7 243 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Txndc2Q6P902 515 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 A0A1L1SQF0 893 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Ush1cQ9ES64 910 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Abca16E9PWJ7 1678 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Exoc6Q8R313 802 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Polr3aB2RXC6 1390 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Tpm1P58771 284 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Fan1Q69ZT1 1020 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Glipr1l2Q9CQ35 332 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 EspnQ9ET47 871 aa7.98□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Adcy10Q8C0T9 1614 aa7.97□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Usp40Q8BWR4 1235 aa7.97□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Clstn1Q9EPL2 979 aa7.97□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Kdm3bQ6ZPY7 1562 aa7.97□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Hap1O35668 628 aa7.97□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Ccdc47Q9D024 483 aaKnown RBP7.97□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Fam184bQ0KK56 942 aa7.97□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Slc52a2Q9D8F3 450 aa7.96□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Spryd3E9Q9B3 442 aa7.96□□□□□ -1.13
Ube4a-201ENSMUST00000117506 Dhx9O70133 1380 aaKnown RBP7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Naip5Q9R016 1403 aa7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Kdm5bQ80Y84 1544 aa7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Slc4a1apE9PX68 744 aa7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Iffo2Q8R2V2 512 aa7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Zcchc11B2RX14 1644 aaKnown RBP7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Ecm2Q5FW85 670 aa7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Abcc2Q8VI47 1543 aa7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Fmn2Q9JL04 1578 aa7.96□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Rassf8Q8CJ96 419 aa7.95□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Cwc15Q9JHS9 229 aaKnown RBP7.95□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Ipo8Q7TMY7 1010 aa7.95□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Irx6Q9ER75 438 aa7.95□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Ttc21bQ0HA38 1315 aa7.95□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Taf3Q5HZG4 932 aa7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Ipo7Q9EPL8 1038 aaKnown RBP7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Kiaa1551Q5DTW7 1521 aa7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Dctn1O08788 1281 aa7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Utp14aQ640M1 767 aaKnown RBP7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Pank3Q8R2W9 370 aa7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Stk26Q99JT2 416 aa7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Srek1Q8BZX4 494 aaKnown RBP7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Dcaf11Q91VU6 549 aa7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 FanciQ8K368 1330 aa7.94□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Fbln2P37889 1221 aa7.93□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Tpd52l1O54818 204 aa7.93□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Puf60Q3UEB3 564 aaKnown RBP7.93□□□□□ -1.14
Ube4a-201ENSMUST00000117506 PtprgQ05909 1442 aa7.93□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Zscan10Q3URR7 782 aa7.93□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Shq1Q7TMX5 569 aa7.93□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Ciz1Q8VEH2 845 aa7.93□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Apbb1Q9QXJ1 710 aa7.93□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Odf2A3KGV1 830 aaKnown RBP7.92□□□□□ -1.14
Ube4a-201ENSMUST00000117506 AampJ3QN89 436 aa7.92□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Dbr1Q923B1 550 aa7.92□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Neurod2Q62414 383 aa7.92□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Lrrc9Q8CDN9 1456 aa7.92□□□□□ -1.14
Ube4a-201ENSMUST00000117506 CgnP59242 1191 aa7.92□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Kif3cO35066 796 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Nol10Q5RJG1 687 aaKnown RBP7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Cnga1P29974 684 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Fbxo2Q80UW2 297 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Arhgef40Q3UPH7 1517 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Prm3Q62100 101 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Golga2Q921M4 999 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Cgnl1Q6AW69 1298 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Cep170Q6A065 1588 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Trappc8E9PWG2 1437 aa7.91□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Rab11fip3Q8CHD8 1047 aa7.9□□□□□ -1.14
Ube4a-201ENSMUST00000117506 SphkapQ6NSW3 1687 aa7.9□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Rufy1Q8BIJ7 712 aa7.9□□□□□ -1.14
Ube4a-201ENSMUST00000117506 Rtf1A2AQ19 715 aaKnown RBP7.9□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Znhit6Q3UFB2 460 aaKnown RBP7.9□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Ppip5k1A2ARP1 1436 aa7.9□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Hook1Q8BIL5 728 aa7.9□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Col17a1Q07563 1470 aa7.9□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Fhod3Q76LL6 1578 aa7.89□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Dnmt1P13864 1620 aaKnown RBP7.89□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Rsph3aQ3UFY4 516 aa7.89□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Podxl2Q8CAE9 603 aa7.89□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Supt6hQ62383 1726 aaKnown RBP7.89□□□□□ -1.15
Ube4a-201ENSMUST00000117506 Anp32eP97822 260 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms