RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 NischQ80TM9 1593 aa11.15□□□□□ -0.62
Ube4a-201ENSMUST00000117506 Rhox8Q6VSS7 320 aa11.02□□□□□ -0.64
Ube4a-201ENSMUST00000117506 Abcc9P70170 1546 aa10.67□□□□□ -0.7
Ube4a-201ENSMUST00000117506 Gm35339A0A140LHH9 1649 aa10.6□□□□□ -0.71
Ube4a-201ENSMUST00000117506 Rpgrip1Q9EPQ2 1331 aa10.59□□□□□ -0.71
Ube4a-201ENSMUST00000117506 Cngb1E1AZ71 1325 aa10.56□□□□□ -0.72
Ube4a-201ENSMUST00000117506 Abcc8B2RUS7 1588 aa10.46□□□□□ -0.73
Ube4a-201ENSMUST00000117506 Pelp1Q9DBD5 1123 aaKnown RBP10.45□□□□□ -0.74
Ube4a-201ENSMUST00000117506 Las1lA2BE28 776 aaKnown RBP10.45□□□□□ -0.74
Ube4a-201ENSMUST00000117506 Rtl1Q7M732 1744 aa10.18□□□□□ -0.78
Ube4a-201ENSMUST00000117506 Trim41Q5NCC3 630 aa10.04□□□□□ -0.8
Ube4a-201ENSMUST00000117506 Ccdc180J3QNE4 1664 aa10.02□□□□□ -0.81
Ube4a-201ENSMUST00000117506 Wdr66E9Q743 1299 aa9.99□□□□□ -0.81
Ube4a-201ENSMUST00000117506 Ccdc136Q3TVA9 1136 aa9.94□□□□□ -0.82
Ube4a-201ENSMUST00000117506 Dcaf1Q80TR8 1506 aa9.88□□□□□ -0.83
Ube4a-201ENSMUST00000117506 Amer1Q7TS75 1132 aa9.87□□□□□ -0.83
Ube4a-201ENSMUST00000117506 Esf1Q3V1V3 845 aaKnown RBP9.85□□□□□ -0.83
Ube4a-201ENSMUST00000117506 4930567H17RikQ3V0K5 233 aa9.85□□□□□ -0.83
Ube4a-201ENSMUST00000117506 NacadQ5SWP3 1504 aa9.84□□□□□ -0.83
Ube4a-201ENSMUST00000117506 Zcchc6Q5BLK4 1491 aaKnown RBP9.81□□□□□ -0.84
Ube4a-201ENSMUST00000117506 CenpbP27790 599 aa9.8□□□□□ -0.84
Ube4a-201ENSMUST00000117506 Rb1cc1Q9ESK9 1588 aa9.78□□□□□ -0.84
Ube4a-201ENSMUST00000117506 HrcG5E8J6 738 aa9.76□□□□□ -0.85
Ube4a-201ENSMUST00000117506 Myt1Q8CFC2 1127 aa9.71□□□□□ -0.86
Ube4a-201ENSMUST00000117506 Stra8P70278 393 aa9.67□□□□□ -0.86
Ube4a-201ENSMUST00000117506 Baz1aO88379 1555 aa9.67□□□□□ -0.86
Ube4a-201ENSMUST00000117506 Kdm5dQ62240 1548 aa9.63□□□□□ -0.87
Ube4a-201ENSMUST00000117506 Ube2uB1AUC4 352 aa9.62□□□□□ -0.87
Ube4a-201ENSMUST00000117506 Brd4Q9ESU6 1400 aaKnown RBP9.59□□□□□ -0.87
Ube4a-201ENSMUST00000117506 Crybg2B7ZCC2 1516 aa9.54□□□□□ -0.88
Ube4a-201ENSMUST00000117506 Ehmt2Q9Z148 1263 aaKnown RBP9.54□□□□□ -0.88
Ube4a-201ENSMUST00000117506 Zeb1Q64318 1117 aa9.52□□□□□ -0.89
Ube4a-201ENSMUST00000117506 Npm2Q80W85 207 aa9.5□□□□□ -0.89
Ube4a-201ENSMUST00000117506 ScribQ80U72 1612 aa9.5□□□□□ -0.89
Ube4a-201ENSMUST00000117506 Gab3Q8BSM5 595 aa9.46□□□□□ -0.89
Ube4a-201ENSMUST00000117506 Sycp2Q9CUU3 1500 aa9.46□□□□□ -0.9
Ube4a-201ENSMUST00000117506 NefmP08553 848 aa9.41□□□□□ -0.9
Ube4a-201ENSMUST00000117506 4933416C03RikQ3V063 378 aa9.39□□□□□ -0.91
Ube4a-201ENSMUST00000117506 Rtl5Q5DTT4 599 aa9.38□□□□□ -0.91
Ube4a-201ENSMUST00000117506 Tnnt3Q9QZ47 272 aa9.35□□□□□ -0.91
Ube4a-201ENSMUST00000117506 Cep164Q5DU05 1446 aa9.32□□□□□ -0.92
Ube4a-201ENSMUST00000117506 Myt1lP97500 1187 aa9.31□□□□□ -0.92
Ube4a-201ENSMUST00000117506 Acin1Q9JIX8 1338 aaKnown RBP9.29□□□□□ -0.92
Ube4a-201ENSMUST00000117506 Pds5bQ4VA53 1446 aaKnown RBP9.28□□□□□ -0.92
Ube4a-201ENSMUST00000117506 Ercc6F8VPZ5 1481 aa9.28□□□□□ -0.92
Ube4a-201ENSMUST00000117506 Smarca2Q6DIC0 1577 aa9.26□□□□□ -0.93
Ube4a-201ENSMUST00000117506 NeflP08551 543 aa9.26□□□□□ -0.93
Ube4a-201ENSMUST00000117506 Golga3P55937 1487 aa9.26□□□□□ -0.93
Ube4a-201ENSMUST00000117506 Anp32bQ9EST5 272 aaKnown RBP9.25□□□□□ -0.93
Ube4a-201ENSMUST00000117506 Il27Q8K3I6 234 aa9.24□□□□□ -0.93
Ube4a-201ENSMUST00000117506 Npm1Q61937 292 aaKnown RBP9.22□□□□□ -0.93
Ube4a-201ENSMUST00000117506 Ttbk1Q6PCN3 1308 aa9.21□□□□□ -0.93
Ube4a-201ENSMUST00000117506 Cdk11bP24788 784 aaKnown RBP9.19□□□□□ -0.94
Ube4a-201ENSMUST00000117506 NrdcQ8BHG1 1161 aa9.16□□□□□ -0.94
Ube4a-201ENSMUST00000117506 Rsf1E9PWW9 1441 aaKnown RBP9.15□□□□□ -0.94
Ube4a-201ENSMUST00000117506 Ubl4bQ9CQ84 188 aa9.15□□□□□ -0.94
Ube4a-201ENSMUST00000117506 Slc24a1Q91WD8 1130 aa9.14□□□□□ -0.95
Ube4a-201ENSMUST00000117506 Atad2bE9Q166 1460 aaKnown RBP9.13□□□□□ -0.95
Ube4a-201ENSMUST00000117506 Smarca4Q3TKT4 1613 aaKnown RBP9.12□□□□□ -0.95
Ube4a-201ENSMUST00000117506 CftrP26361 1476 aa9.1□□□□□ -0.95
Ube4a-201ENSMUST00000117506 UbtfP25976 765 aaKnown RBP9.08□□□□□ -0.96
Ube4a-201ENSMUST00000117506 Chic1Q8CBW7 227 aa9.07□□□□□ -0.96
Ube4a-201ENSMUST00000117506 Cttnbp2B9EJA2 1648 aa9.06□□□□□ -0.96
Ube4a-201ENSMUST00000117506 Fmn1Q05860 1466 aa9.06□□□□□ -0.96
Ube4a-201ENSMUST00000117506 Ccdc18Q640L5 1455 aa9.06□□□□□ -0.96
Ube4a-201ENSMUST00000117506 Kif15Q6P9L6 1387 aa9.04□□□□□ -0.96
Ube4a-201ENSMUST00000117506 Cecr2E9Q2Z1 1453 aa9.04□□□□□ -0.96
Ube4a-201ENSMUST00000117506 Ythdc1E9Q5K9 736 aaKnown RBP9.03□□□□□ -0.96
Ube4a-201ENSMUST00000117506 DiexfQ8BTT6 772 aaKnown RBP9.02□□□□□ -0.97
Ube4a-201ENSMUST00000117506 Synj1Q8CHC4 1574 aa9.01□□□□□ -0.97
Ube4a-201ENSMUST00000117506 Nop58Q6DFW4 536 aaKnown RBP8.98□□□□□ -0.97
Ube4a-201ENSMUST00000117506 Iqgap2Q3UQ44 1575 aa8.97□□□□□ -0.97
Ube4a-201ENSMUST00000117506 Phldb1Q6PDH0 1371 aaKnown RBP8.96□□□□□ -0.98
Ube4a-201ENSMUST00000117506 Clip1Q922J3 1391 aa8.96□□□□□ -0.98
Ube4a-201ENSMUST00000117506 BicraF8VPZ9 1578 aa8.93□□□□□ -0.98
Ube4a-201ENSMUST00000117506 Eif5bQ05D44 1216 aaKnown RBP8.92□□□□□ -0.98
Ube4a-201ENSMUST00000117506 Anp32aO35381 247 aa8.92□□□□□ -0.98
Ube4a-201ENSMUST00000117506 Ap3b1Q9Z1T1 1105 aa8.92□□□□□ -0.98
Ube4a-201ENSMUST00000117506 NclP09405 707 aaKnown RBP8.89□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Neurod1Q60867 357 aa8.88□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Ccdc88bQ4QRL3 1481 aa8.88□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Os9Q8K2C7 672 aa8.88□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Pcgf6Q99NA9 353 aa8.87□□□□□ -0.99
Ube4a-201ENSMUST00000117506 CatipB9EKE5 520 aa8.87□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Ccer2J3QPU5 274 aa8.85□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Fam50aQ9WV03 339 aaKnown RBP8.85□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Mier1Q5UAK0 511 aa8.85□□□□□ -0.99
Ube4a-201ENSMUST00000117506 DaxxO35613 739 aa8.85□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Eea1Q8BL66 1411 aa8.85□□□□□ -0.99
Ube4a-201ENSMUST00000117506 Setd5Q5XJV7 1441 aa8.83□□□□□ -1
Ube4a-201ENSMUST00000117506 Cep162Q6ZQ06 1403 aa8.82□□□□□ -1
Ube4a-201ENSMUST00000117506 Cux2P70298 1426 aa8.81□□□□□ -1
Ube4a-201ENSMUST00000117506 Ccdc9Q8VC31 543 aaKnown RBP8.81□□□□□ -1
Ube4a-201ENSMUST00000117506 Plekhg3Q4VAC9 1341 aa8.81□□□□□ -1
Ube4a-201ENSMUST00000117506 TonslQ6NZL6 1363 aa8.8□□□□□ -1
Ube4a-201ENSMUST00000117506 Upf2A2AT37 1269 aaKnown RBP8.79□□□□□ -1
Ube4a-201ENSMUST00000117506 Hdac5Q9Z2V6 1113 aa8.79□□□□□ -1
Ube4a-201ENSMUST00000117506 Baz1bQ9Z277 1479 aa8.78□□□□□ -1
Ube4a-201ENSMUST00000117506 Lmod2Q3UHZ5 550 aa8.76□□□□□ -1.01
Ube4a-201ENSMUST00000117506 Rapgef2Q8CHG7 1496 aa8.76□□□□□ -1.01
Retrieved 100 of 22,080 RNA–protein pairs in 38.4 ms