RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W YKR005CQ02203 525 aa4.78□□□□□ -1.64
SHM1YBR263W YDC1Q02896 317 aa4.78□□□□□ -1.64
SHM1YBR263W TPO3Q06451 622 aa4.78□□□□□ -1.64
SHM1YBR263W RFU1Q08003 200 aa4.78□□□□□ -1.64
SHM1YBR263W INP53Q12271 1107 aa4.78□□□□□ -1.64
SHM1YBR263W CDC28P00546 298 aaKnown RBP4.77□□□□□ -1.65
SHM1YBR263W ARO4P32449 370 aaKnown RBP4.77□□□□□ -1.65
SHM1YBR263W SPC29P33419 253 aa4.77□□□□□ -1.65
SHM1YBR263W VMA22P38784 181 aa4.77□□□□□ -1.65
SHM1YBR263W HTD2P38790 280 aaKnown RBP4.77□□□□□ -1.65
SHM1YBR263W SMB1P40018 196 aaKnown RBP4.77□□□□□ -1.65
SHM1YBR263W YER079WP40052 210 aaKnown RBP4.77□□□□□ -1.65
SHM1YBR263W YIL060WP40519 144 aa4.77□□□□□ -1.65
SHM1YBR263W SYS1P41544 203 aa4.77□□□□□ -1.65
SHM1YBR263W EGT2P42835 1041 aa4.77□□□□□ -1.65
SHM1YBR263W IRC18P47056 224 aa4.77□□□□□ -1.65
SHM1YBR263W GPI14P47088 403 aaKnown RBP4.77□□□□□ -1.65
SHM1YBR263W BNA1P47096 177 aa4.77□□□□□ -1.65
SHM1YBR263W CGR1P53188 120 aa4.77□□□□□ -1.65
SHM1YBR263W VHT1P53241 593 aa4.77□□□□□ -1.65
SHM1YBR263W CTF19Q02732 369 aa4.77□□□□□ -1.65
SHM1YBR263W YLR283WQ05867 314 aa4.77□□□□□ -1.65
SHM1YBR263W YPR098CQ06089 161 aa4.77□□□□□ -1.65
SHM1YBR263W MRX9Q07349 420 aaKnown RBP4.77□□□□□ -1.65
SHM1YBR263W TMC1Q08422 150 aaPredicted RBP4.77□□□□□ -1.65
SHM1YBR263W SRL2Q12020 392 aa4.77□□□□□ -1.65
SHM1YBR263W YOR283WQ12040 230 aaKnown RBP4.77□□□□□ -1.65
SHM1YBR263W HUT1Q12520 339 aa4.77□□□□□ -1.65
SHM1YBR263W SPT14P32363 452 aa4.76□□□□□ -1.65
SHM1YBR263W MNS1P32906 549 aa4.76□□□□□ -1.65
SHM1YBR263W YOX1P34161 385 aa4.76□□□□□ -1.65
SHM1YBR263W MRPL36P36531 177 aa4.76□□□□□ -1.65
SHM1YBR263W IPI1P38803 334 aaPredicted RBP4.76□□□□□ -1.65
SHM1YBR263W BXI1P48558 297 aa4.76□□□□□ -1.65
SHM1YBR263W PEF1P53238 335 aa4.76□□□□□ -1.65
SHM1YBR263W TIM44Q01852 431 aa4.76□□□□□ -1.65
SHM1YBR263W YMR130WQ04223 302 aa4.76□□□□□ -1.65
SHM1YBR263W KEI1Q06346 221 aa4.76□□□□□ -1.65
SHM1YBR263W FSH3Q99369 266 aa4.76□□□□□ -1.65
SHM1YBR263W YER137CP40083 148 aaKnown RBP4.75□□□□□ -1.65
SHM1YBR263W YIL012WP40551 113 aa4.75□□□□□ -1.65
SHM1YBR263W GLR1P41921 483 aaKnown RBP4.75□□□□□ -1.65
SHM1YBR263W RGC1Q06108 1083 aaKnown RBP4.75□□□□□ -1.65
SHM1YBR263W PIN3Q06449 215 aa4.75□□□□□ -1.65
SHM1YBR263W SNA4Q07549 140 aa4.75□□□□□ -1.65
SHM1YBR263W YLR108CQ12259 485 aa4.75□□□□□ -1.65
SHM1YBR263W ODC2Q99297 307 aa4.75□□□□□ -1.65
SHM1YBR263W Q0297Q9ZZV8 51 aa4.75□□□□□ -1.65
SHM1YBR263W BPH1P25356 2167 aa4.75□□□□□ -1.65
SHM1YBR263W REP2P03872 296 aa4.75□□□□□ -1.65
SHM1YBR263W RPL39P04650 51 aa4.75□□□□□ -1.65
SHM1YBR263W CHO1P08456 276 aa4.75□□□□□ -1.65
SHM1YBR263W YML003WP0CF16 290 aa4.75□□□□□ -1.65
SHM1YBR263W YCL042WP25572 119 aa4.75□□□□□ -1.65
SHM1YBR263W VAM7P32912 316 aa4.75□□□□□ -1.65
SHM1YBR263W RMD6P39975 231 aa4.75□□□□□ -1.65
SHM1YBR263W HPA3P39979 161 aa4.75□□□□□ -1.65
SHM1YBR263W NOP16P40007 231 aaKnown RBP4.75□□□□□ -1.65
SHM1YBR263W CAT5P41735 233 aa4.75□□□□□ -1.65
SHM1YBR263W HAM1P47119 197 aaKnown RBP4.75□□□□□ -1.65
SHM1YBR263W IMD3P50095 523 aaKnown RBP4.75□□□□□ -1.65
SHM1YBR263W TAF4P50105 388 aa4.75□□□□□ -1.65
SHM1YBR263W UFD1P53044 361 aa4.75□□□□□ -1.65
SHM1YBR263W YGR042WP53227 271 aa4.75□□□□□ -1.65
SHM1YBR263W MRPL50P53724 139 aa4.75□□□□□ -1.65
SHM1YBR263W TEX1P53851 422 aaKnown RBP4.75□□□□□ -1.65
SHM1YBR263W INN1P53901 409 aa4.75□□□□□ -1.65
SHM1YBR263W YNL046WP53956 172 aa4.75□□□□□ -1.65
SHM1YBR263W YDR248CQ03786 193 aa4.75□□□□□ -1.65
SHM1YBR263W MPD1Q12404 318 aaKnown RBP4.75□□□□□ -1.65
SHM1YBR263W RPL25P04456 142 aaKnown RBP4.74□□□□□ -1.65
SHM1YBR263W PEX4P29340 183 aa4.74□□□□□ -1.65
SHM1YBR263W VMA5P31412 392 aaKnown RBP4.74□□□□□ -1.65
SHM1YBR263W AGA2P32781 87 aa4.74□□□□□ -1.65
SHM1YBR263W YBL010CP32788 280 aa4.74□□□□□ -1.65
SHM1YBR263W YHR122WP38829 231 aa4.74□□□□□ -1.65
SHM1YBR263W YER121WP40076 114 aa4.74□□□□□ -1.65
SHM1YBR263W OTU1P43558 301 aa4.74□□□□□ -1.65
SHM1YBR263W GON7P46984 123 aa4.74□□□□□ -1.65
SHM1YBR263W GWT1P47026 490 aa4.74□□□□□ -1.65
SHM1YBR263W SBH2P52871 88 aa4.74□□□□□ -1.65
SHM1YBR263W HNT1Q04344 158 aaKnown RBP4.74□□□□□ -1.65
SHM1YBR263W YDR114CQ04597 100 aa4.74□□□□□ -1.65
SHM1YBR263W YOR186WQ08560 144 aa4.74□□□□□ -1.65
SHM1YBR263W YPL199CQ08954 240 aa4.74□□□□□ -1.65
SHM1YBR263W EAF3Q12432 401 aa4.74□□□□□ -1.65
SHM1YBR263W SPS4P09937 338 aa4.73□□□□□ -1.65
SHM1YBR263W RPL3P14126 387 aaKnown RBP4.73□□□□□ -1.65
SHM1YBR263W URA6P15700 204 aa4.73□□□□□ -1.65
SHM1YBR263W IMP1P28627 190 aa4.73□□□□□ -1.65
SHM1YBR263W NAT2P37293 288 aa4.73□□□□□ -1.65
SHM1YBR263W CTR2P38865 189 aa4.73□□□□□ -1.65
SHM1YBR263W COX16P47081 118 aa4.73□□□□□ -1.65
SHM1YBR263W TPN1P53099 579 aa4.73□□□□□ -1.65
SHM1YBR263W ERV25P54837 211 aaKnown RBP4.73□□□□□ -1.65
SHM1YBR263W GMC1Q04399 608 aa4.73□□□□□ -1.65
SHM1YBR263W YPD1Q07688 167 aa4.73□□□□□ -1.65
SHM1YBR263W FCY22Q12119 530 aa4.73□□□□□ -1.65
SHM1YBR263W SCM3Q12334 223 aa4.73□□□□□ -1.65
SHM1YBR263W CMC2Q3E7A4 109 aa4.73□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 55.2 ms