Protein–RNA interactions for Protein: P25572

YCL042W, Putative uncharacterized protein YCL042W, yeastyeast

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCL042WP25572 YML009W-BYML009W-B 477 nt17.29■□□□□ 0.36
YCL042WP25572 NOP1YDL014W 984 nt17.2■□□□□ 0.34
YCL042WP25572 NSR1YGR159C 1245 nt16.76■□□□□ 0.27
YCL042WP25572 YKL036CYKL036C 393 nt16.41■□□□□ 0.22
YCL042WP25572 YJL027CYJL027C 417 nt15.4■□□□□ 0.06
YCL042WP25572 Q0297Q0297 156 nt15.24■□□□□ 0.03
YCL042WP25572 SCS3YGL126W 1143 nt15.19■□□□□ 0.02
YCL042WP25572 SRX1YKL086W 384 nt15□□□□□ -0.01
YCL042WP25572 SCJ1YMR214W 1134 nt14.42□□□□□ -0.1
YCL042WP25572 YCR051WYCR051W 669 nt14.2□□□□□ -0.14
YCL042WP25572 YOL085CYOL085C 342 nt14.16□□□□□ -0.14
YCL042WP25572 MDJ1YFL016C 1536 nt14.11□□□□□ -0.15
YCL042WP25572 ATS1YAL020C 1002 nt13.8□□□□□ -0.2
YCL042WP25572 PKP1YIL042C 1185 nt13.77□□□□□ -0.21
YCL042WP25572 RPP1BYDL130W 321 nt13.65□□□□□ -0.22
YCL042WP25572 TRN1tP(UGG)A 72 nt13.15□□□□□ -0.3
YCL042WP25572 SUF9tP(UGG)F 72 nt13.15□□□□□ -0.3
YCL042WP25572 SUF8tP(UGG)H 72 nt13.15□□□□□ -0.3
YCL042WP25572 tP(UGG)LtP(UGG)L 72 nt13.15□□□□□ -0.3
YCL042WP25572 SUF7tP(UGG)M 72 nt13.15□□□□□ -0.3
YCL042WP25572 tP(UGG)N1tP(UGG)N1 72 nt13.15□□□□□ -0.3
YCL042WP25572 tP(UGG)N2tP(UGG)N2 72 nt13.15□□□□□ -0.3
YCL042WP25572 tP(UGG)O1tP(UGG)O1 72 nt13.15□□□□□ -0.3
YCL042WP25572 SUF11tP(UGG)O2 72 nt13.15□□□□□ -0.3
YCL042WP25572 SCR1SCR1 522 nt13.05□□□□□ -0.32
YCL042WP25572 RTC3YHR087W 336 nt12.94□□□□□ -0.34
YCL042WP25572 CCC1YLR220W 969 nt12.94□□□□□ -0.34
YCL042WP25572 PET122YER153C 765 nt12.89□□□□□ -0.35
YCL042WP25572 DBP2YNL112W 1641 nt12.77□□□□□ -0.36
YCL042WP25572 PST2YDR032C 597 nt12.68□□□□□ -0.38
YCL042WP25572 tP(UGG)O3tP(UGG)O3 72 nt12.64□□□□□ -0.39
YCL042WP25572 RRN5YLR141W 1092 nt12.6□□□□□ -0.39
YCL042WP25572 RSB1YOR049C 1065 nt12.53□□□□□ -0.4
YCL042WP25572 YKL097CYKL097C 411 nt12.52□□□□□ -0.41
YCL042WP25572 YER088W-BYER088W-B 147 nt12.37□□□□□ -0.43
YCL042WP25572 YDJ1YNL064C 1230 nt12.3□□□□□ -0.44
YCL042WP25572 RVS167YDR388W 1449 nt12.28□□□□□ -0.44
YCL042WP25572 YBR190WYBR190W 312 nt12□□□□□ -0.49
YCL042WP25572 SHR5YOL110W 714 nt11.97□□□□□ -0.49
YCL042WP25572 SHU1YHL006C 453 nt11.95□□□□□ -0.5
YCL042WP25572 YOR139CYOR139C 393 nt11.83□□□□□ -0.52
YCL042WP25572 GAR1YHR089C 618 nt11.81□□□□□ -0.52
YCL042WP25572 NPL3YDR432W 1245 nt11.66□□□□□ -0.54
YCL042WP25572 YAL037C-BYAL037C-B 975 nt11.5□□□□□ -0.57
YCL042WP25572 TIR1YER011W 765 nt11.42□□□□□ -0.58
YCL042WP25572 tM(CAU)CtM(CAU)C 72 nt11.36□□□□□ -0.59
YCL042WP25572 IMT4tM(CAU)E 72 nt11.36□□□□□ -0.59
YCL042WP25572 IMT3tM(CAU)J3 72 nt11.36□□□□□ -0.59
YCL042WP25572 IMT1tM(CAU)O1 72 nt11.36□□□□□ -0.59
YCL042WP25572 IMT2tM(CAU)P 72 nt11.36□□□□□ -0.59
YCL042WP25572 YOL037CYOL037C 354 nt11.33□□□□□ -0.6
YCL042WP25572 BSC6YOL137W 1494 nt11.32□□□□□ -0.6
YCL042WP25572 YNL208WYNL208W 600 nt11.32□□□□□ -0.6
YCL042WP25572 RPN10YHR200W 807 nt11.29□□□□□ -0.6
YCL042WP25572 DEP1YAL013W 1218 nt11.28□□□□□ -0.6
YCL042WP25572 YGR021WYGR021W 873 nt11.24□□□□□ -0.61
YCL042WP25572 URN1YPR152C 1398 nt11.18□□□□□ -0.62
YCL042WP25572 MOT3YMR070W 1473 nt11.17□□□□□ -0.62
YCL042WP25572 HOM6YJR139C 1080 nt11.16□□□□□ -0.62
YCL042WP25572 SSA1YAL005C 1929 nt11.11□□□□□ -0.63
YCL042WP25572 MNP1YGL068W 585 nt11.1□□□□□ -0.63
YCL042WP25572 MRPL8YJL063C 717 nt11.09□□□□□ -0.63
YCL042WP25572 PUS2YGL063W 1113 nt11.02□□□□□ -0.65
YCL042WP25572 RKM5YLR137W 1104 nt10.99□□□□□ -0.65
YCL042WP25572 WWM1YFL010C 636 nt10.97□□□□□ -0.65
YCL042WP25572 YLR281CYLR281C 468 nt10.97□□□□□ -0.65
YCL042WP25572 SRB2YHR041C 633 nt10.94□□□□□ -0.66
YCL042WP25572 OPI9YLR338W 858 nt10.94□□□□□ -0.66
YCL042WP25572 YFL021C-AYFL021C-A 855 nt10.9□□□□□ -0.66
YCL042WP25572 ADO1YJR105W 1023 nt10.86□□□□□ -0.67
YCL042WP25572 WHI5YOR083W 888 nt10.8□□□□□ -0.68
YCL042WP25572 UBX6YJL048C 1191 nt10.77□□□□□ -0.69
YCL042WP25572 RPP2BYDR382W 333 nt10.76□□□□□ -0.69
YCL042WP25572 YJR018WYJR018W 363 nt10.74□□□□□ -0.69
YCL042WP25572 FMP45YDL222C 930 nt10.73□□□□□ -0.69
YCL042WP25572 YCH1YGR203W 447 nt10.73□□□□□ -0.69
YCL042WP25572 IMP2'YIL154C 1041 nt10.72□□□□□ -0.69
YCL042WP25572 PUN1YLR414C 792 nt10.67□□□□□ -0.7
YCL042WP25572 DSK2YMR276W 1122 nt10.67□□□□□ -0.7
YCL042WP25572 YEL076C-AYEL076C-A 651 nt10.66□□□□□ -0.7
YCL042WP25572 YEL076CYEL076C 651 nt10.66□□□□□ -0.7
YCL042WP25572 LSM3YLR438C-A 270 nt10.66□□□□□ -0.7
YCL042WP25572 YLR464WYLR464W 651 nt10.66□□□□□ -0.7
YCL042WP25572 YJR120WYJR120W 351 nt10.63□□□□□ -0.71
YCL042WP25572 SAH1YER043C 1350 nt10.63□□□□□ -0.71
YCL042WP25572 SSA3YBL075C 1950 nt10.63□□□□□ -0.71
YCL042WP25572 BDH2YAL061W 1254 nt10.62□□□□□ -0.71
YCL042WP25572 YPR011CYPR011C 981 nt10.57□□□□□ -0.72
YCL042WP25572 SIS1YNL007C 1059 nt10.54□□□□□ -0.72
YCL042WP25572 YLR236CYLR236C 324 nt10.51□□□□□ -0.73
YCL042WP25572 RTG1YOL067C 534 nt10.48□□□□□ -0.73
YCL042WP25572 YDR094WYDR094W 336 nt10.46□□□□□ -0.73
YCL042WP25572 YFL015W-AYFL015W-A 318 nt10.46□□□□□ -0.73
YCL042WP25572 ERV46YAL042W 1248 nt10.38□□□□□ -0.75
YCL042WP25572 YLR154C-GYLR154C-G 150 nt10.38□□□□□ -0.75
YCL042WP25572 INM2YDR287W 879 nt10.35□□□□□ -0.75
YCL042WP25572 HUA1YGR268C 597 nt10.35□□□□□ -0.75
YCL042WP25572 PTC2YER089C 1395 nt10.34□□□□□ -0.75
YCL042WP25572 ARE1YCR048W 1833 nt10.33□□□□□ -0.76
YCL042WP25572 PUT4YOR348C 1884 nt10.33□□□□□ -0.76
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms