Protein–RNA interactions for Protein: P00546

CDC28, Cyclin-dependent kinase 1, yeastyeast

Known RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC28P00546 NSR1YGR159C 1245 nt17.47■□□□□ 0.39
CDC28P00546 YML009W-BYML009W-B 477 nt17.4■□□□□ 0.38
CDC28P00546 NOP1YDL014W 984 nt16.85■□□□□ 0.29
CDC28P00546 MDJ1YFL016C 1536 nt15.69■□□□□ 0.1
CDC28P00546 YKL036CYKL036C 393 nt15.34■□□□□ 0.05
CDC28P00546 SRX1YKL086W 384 nt14.7□□□□□ -0.06
CDC28P00546 Q0297Q0297 156 nt14.65□□□□□ -0.06
CDC28P00546 YJL027CYJL027C 417 nt14.49□□□□□ -0.09
CDC28P00546 YCR051WYCR051W 669 nt13.95□□□□□ -0.18
CDC28P00546 SCS3YGL126W 1143 nt13.83□□□□□ -0.2
CDC28P00546 DBP2YNL112W 1641 nt13.79□□□□□ -0.2
CDC28P00546 SSA3YBL075C 1950 nt13.51□□□□□ -0.25
CDC28P00546 YBR190WYBR190W 312 nt13.44□□□□□ -0.26
CDC28P00546 TRN1tP(UGG)A 72 nt13.39□□□□□ -0.27
CDC28P00546 SUF9tP(UGG)F 72 nt13.39□□□□□ -0.27
CDC28P00546 SUF8tP(UGG)H 72 nt13.39□□□□□ -0.27
CDC28P00546 tP(UGG)LtP(UGG)L 72 nt13.39□□□□□ -0.27
CDC28P00546 SUF7tP(UGG)M 72 nt13.39□□□□□ -0.27
CDC28P00546 tP(UGG)N1tP(UGG)N1 72 nt13.39□□□□□ -0.27
CDC28P00546 tP(UGG)N2tP(UGG)N2 72 nt13.39□□□□□ -0.27
CDC28P00546 tP(UGG)O1tP(UGG)O1 72 nt13.39□□□□□ -0.27
CDC28P00546 SUF11tP(UGG)O2 72 nt13.39□□□□□ -0.27
CDC28P00546 CCC1YLR220W 969 nt13.3□□□□□ -0.28
CDC28P00546 YOL085CYOL085C 342 nt13.29□□□□□ -0.28
CDC28P00546 RPP1BYDL130W 321 nt13.16□□□□□ -0.3
CDC28P00546 RTC3YHR087W 336 nt13.16□□□□□ -0.3
CDC28P00546 PKP1YIL042C 1185 nt13.12□□□□□ -0.31
CDC28P00546 RVS167YDR388W 1449 nt12.96□□□□□ -0.34
CDC28P00546 SCJ1YMR214W 1134 nt12.79□□□□□ -0.36
CDC28P00546 tP(UGG)O3tP(UGG)O3 72 nt12.63□□□□□ -0.39
CDC28P00546 PET122YER153C 765 nt12.59□□□□□ -0.39
CDC28P00546 SHR5YOL110W 714 nt12.44□□□□□ -0.42
CDC28P00546 SCR1SCR1 522 nt12.43□□□□□ -0.42
CDC28P00546 PUT4YOR348C 1884 nt12.35□□□□□ -0.43
CDC28P00546 ATS1YAL020C 1002 nt12.33□□□□□ -0.44
CDC28P00546 URN1YPR152C 1398 nt12.23□□□□□ -0.45
CDC28P00546 RRN5YLR141W 1092 nt12.22□□□□□ -0.45
CDC28P00546 YDJ1YNL064C 1230 nt12.21□□□□□ -0.45
CDC28P00546 DEP1YAL013W 1218 nt12.17□□□□□ -0.46
CDC28P00546 OPI9YLR338W 858 nt12.07□□□□□ -0.48
CDC28P00546 ARE1YCR048W 1833 nt12.07□□□□□ -0.48
CDC28P00546 SAH1YER043C 1350 nt12.06□□□□□ -0.48
CDC28P00546 RPN10YHR200W 807 nt12□□□□□ -0.49
CDC28P00546 GAR1YHR089C 618 nt11.99□□□□□ -0.49
CDC28P00546 POA1YBR022W 534 nt11.98□□□□□ -0.49
CDC28P00546 YER088W-BYER088W-B 147 nt11.97□□□□□ -0.49
CDC28P00546 YNL208WYNL208W 600 nt11.96□□□□□ -0.49
CDC28P00546 YHR049C-AYHR049C-A 297 nt11.91□□□□□ -0.5
CDC28P00546 RSB1YOR049C 1065 nt11.91□□□□□ -0.5
CDC28P00546 PUN1YLR414C 792 nt11.73□□□□□ -0.53
CDC28P00546 BSC6YOL137W 1494 nt11.73□□□□□ -0.53
CDC28P00546 YJR018WYJR018W 363 nt11.65□□□□□ -0.54
CDC28P00546 BUD23YCR047C 828 nt11.64□□□□□ -0.55
CDC28P00546 PTC2YER089C 1395 nt11.63□□□□□ -0.55
CDC28P00546 TIR1YER011W 765 nt11.59□□□□□ -0.55
CDC28P00546 SSA4YER103W 1929 nt11.51□□□□□ -0.57
CDC28P00546 NAB2YGL122C 1578 nt11.51□□□□□ -0.57
CDC28P00546 SSA1YAL005C 1929 nt11.48□□□□□ -0.57
CDC28P00546 PST2YDR032C 597 nt11.45□□□□□ -0.58
CDC28P00546 PAC11YDR488C 1602 nt11.45□□□□□ -0.58
CDC28P00546 RPP2BYDR382W 333 nt11.38□□□□□ -0.59
CDC28P00546 YJR120WYJR120W 351 nt11.38□□□□□ -0.59
CDC28P00546 SPT5YML010W 3192 nt11.33□□□□□ -0.6
CDC28P00546 DAL1YIR027C 1383 nt11.31□□□□□ -0.6
CDC28P00546 FPR4YLR449W 1179 nt11.31□□□□□ -0.6
CDC28P00546 NVJ2YPR091C 2313 nt11.3□□□□□ -0.6
CDC28P00546 FIS1YIL065C 468 nt11.28□□□□□ -0.6
CDC28P00546 INM2YDR287W 879 nt11.27□□□□□ -0.61
CDC28P00546 SRB2YHR041C 633 nt11.22□□□□□ -0.61
CDC28P00546 PHO4YFR034C 939 nt11.19□□□□□ -0.62
CDC28P00546 BDF1YLR399C 2061 nt11.19□□□□□ -0.62
CDC28P00546 YBL100CYBL100C 315 nt11.12□□□□□ -0.63
CDC28P00546 BDH2YAL061W 1254 nt11.1□□□□□ -0.63
CDC28P00546 YPS1YLR120C 1710 nt11.05□□□□□ -0.64
CDC28P00546 WWM1YFL010C 636 nt11.04□□□□□ -0.64
CDC28P00546 SHU1YHL006C 453 nt11.03□□□□□ -0.64
CDC28P00546 MEP2YNL142W 1500 nt11.03□□□□□ -0.64
CDC28P00546 TAT1YBR069C 1860 nt11.02□□□□□ -0.65
CDC28P00546 FUN26YAL022C 1554 nt10.99□□□□□ -0.65
CDC28P00546 FPS1YLL043W 2010 nt10.96□□□□□ -0.65
CDC28P00546 YHR165W-AYHR165W-A 312 nt10.96□□□□□ -0.65
CDC28P00546 YAL037C-BYAL037C-B 975 nt10.95□□□□□ -0.66
CDC28P00546 TRM9YML014W 840 nt10.95□□□□□ -0.66
CDC28P00546 YDR095CYDR095C 411 nt10.93□□□□□ -0.66
CDC28P00546 LSM3YLR438C-A 270 nt10.92□□□□□ -0.66
CDC28P00546 YGR021WYGR021W 873 nt10.91□□□□□ -0.66
CDC28P00546 YKL097CYKL097C 411 nt10.9□□□□□ -0.66
CDC28P00546 ALF1YNL148C 765 nt10.89□□□□□ -0.67
CDC28P00546 YFL021C-AYFL021C-A 855 nt10.86□□□□□ -0.67
CDC28P00546 HOM6YJR139C 1080 nt10.85□□□□□ -0.67
CDC28P00546 DCW1YKL046C 1350 nt10.85□□□□□ -0.67
CDC28P00546 CCT6YDR188W 1641 nt10.82□□□□□ -0.68
CDC28P00546 MNP1YGL068W 585 nt10.77□□□□□ -0.69
CDC28P00546 SUF2tP(AGG)C 72 nt10.76□□□□□ -0.69
CDC28P00546 SUF10tP(AGG)N 72 nt10.76□□□□□ -0.69
CDC28P00546 RPP2AYOL039W 321 nt10.76□□□□□ -0.69
CDC28P00546 EMI2YDR516C 1503 nt10.72□□□□□ -0.69
CDC28P00546 PTP1YDL230W 1008 nt10.71□□□□□ -0.69
CDC28P00546 RKM5YLR137W 1104 nt10.7□□□□□ -0.7
CDC28P00546 SIS1YNL007C 1059 nt10.7□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 9.8 ms