RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W YHR214C-DP0CX93 97 aa3.19□□□□□ -1.9
MSD1YPL104W GRX2P17695 143 aaKnown RBP3.19□□□□□ -1.9
MSD1YPL104W STE4P18851 423 aa3.19□□□□□ -1.9
MSD1YPL104W SAR1P20606 190 aaKnown RBP3.19□□□□□ -1.9
MSD1YPL104W ATG22P25568 528 aa3.19□□□□□ -1.9
MSD1YPL104W CNE1P27825 502 aa3.19□□□□□ -1.9
MSD1YPL104W ATS1P31386 333 aa3.19□□□□□ -1.9
MSD1YPL104W GRE3P38715 327 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
MSD1YPL104W YHR122WP38829 231 aa3.19□□□□□ -1.9
MSD1YPL104W SMB1P40018 196 aaKnown RBP3.19□□□□□ -1.9
MSD1YPL104W REE1P40893 198 aa3.19□□□□□ -1.9
MSD1YPL104W MTM1P53320 366 aa3.19□□□□□ -1.9
MSD1YPL104W PDR16P53860 351 aaKnown RBP3.19□□□□□ -1.9
MSD1YPL104W ASI3P53983 676 aa3.19□□□□□ -1.9
MSD1YPL104W YPL039WQ03080 316 aa3.19□□□□□ -1.9
MSD1YPL104W KEI1Q06346 221 aa3.19□□□□□ -1.9
MSD1YPL104W MIM1Q08176 113 aa3.19□□□□□ -1.9
MSD1YPL104W NIP7Q08962 181 aaKnown RBP3.19□□□□□ -1.9
MSD1YPL104W SWT1Q12104 458 aa3.19□□□□□ -1.9
MSD1YPL104W HTZ1Q12692 134 aaKnown RBP3.19□□□□□ -1.9
MSD1YPL104W RAD52P06778 471 aaKnown RBP3.18□□□□□ -1.9
MSD1YPL104W SPO7P18410 259 aa3.18□□□□□ -1.9
MSD1YPL104W ERG4P25340 473 aa3.18□□□□□ -1.9
MSD1YPL104W YCR061WP25639 631 aa3.18□□□□□ -1.9
MSD1YPL104W CAM1P29547 415 aaKnown RBP3.18□□□□□ -1.9
MSD1YPL104W MSS1P32559 526 aaPredicted RBP3.18□□□□□ -1.9
MSD1YPL104W UTP30P36144 274 aaKnown RBP3.18□□□□□ -1.9
MSD1YPL104W OM14P38325 134 aa3.18□□□□□ -1.9
MSD1YPL104W VMA22P38784 181 aa3.18□□□□□ -1.9
MSD1YPL104W CHS7P38843 316 aa3.18□□□□□ -1.9
MSD1YPL104W SGN1P40561 250 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
MSD1YPL104W CAT5P41735 233 aa3.18□□□□□ -1.9
MSD1YPL104W MNN5P46982 586 aa3.18□□□□□ -1.9
MSD1YPL104W AIM25P47140 327 aa3.18□□□□□ -1.9
MSD1YPL104W RMD9P53140 646 aaKnown RBP3.18□□□□□ -1.9
MSD1YPL104W VHT1P53241 593 aa3.18□□□□□ -1.9
MSD1YPL104W YGR066CP53242 292 aa3.18□□□□□ -1.9
MSD1YPL104W SAM50P53969 484 aa3.18□□□□□ -1.9
MSD1YPL104W YLR152CP54072 576 aa3.18□□□□□ -1.9
MSD1YPL104W NUP53Q03790 475 aa3.18□□□□□ -1.9
MSD1YPL104W GIS1Q03833 894 aa3.18□□□□□ -1.9
MSD1YPL104W MIX14Q04341 121 aa3.18□□□□□ -1.9
MSD1YPL104W CTS2Q06350 511 aa3.18□□□□□ -1.9
MSD1YPL104W MDM32Q12171 622 aa3.18□□□□□ -1.9
MSD1YPL104W ORT1Q12375 292 aa3.18□□□□□ -1.9
MSD1YPL104W RIP1P08067 215 aa3.18□□□□□ -1.9
MSD1YPL104W YFR010W-AP0C5N0 62 aa3.18□□□□□ -1.9
MSD1YPL104W MATALPHA1P0CY06 175 aa3.18□□□□□ -1.9
MSD1YPL104W HMLALPHA1P0CY07 175 aa3.18□□□□□ -1.9
MSD1YPL104W STF2P16965 84 aa3.18□□□□□ -1.9
MSD1YPL104W UTR1P21373 530 aa3.18□□□□□ -1.9
MSD1YPL104W MEK1P24719 497 aaPredicted RBP3.18□□□□□ -1.9
MSD1YPL104W NAM9P27929 486 aa3.18□□□□□ -1.9
MSD1YPL104W APD1P38281 316 aa3.18□□□□□ -1.9
MSD1YPL104W LEU5P38702 357 aa3.18□□□□□ -1.9
MSD1YPL104W SHO1P40073 367 aa3.18□□□□□ -1.9
MSD1YPL104W RFC4P40339 323 aaKnown RBP3.18□□□□□ -1.9
MSD1YPL104W DLS1P40366 167 aa3.18□□□□□ -1.9
MSD1YPL104W ECO1P43605 281 aa3.18□□□□□ -1.9
MSD1YPL104W UBX6P47049 396 aa3.18□□□□□ -1.9
MSD1YPL104W SCW4P53334 386 aaKnown RBP3.18□□□□□ -1.9
MSD1YPL104W CTF19Q02732 369 aa3.18□□□□□ -1.9
MSD1YPL104W SDC1Q03323 175 aa3.18□□□□□ -1.9
MSD1YPL104W YDR102CQ03864 110 aa3.18□□□□□ -1.9
MSD1YPL104W UTP15Q04305 513 aaKnown RBP3.18□□□□□ -1.9
MSD1YPL104W NNT1Q05874 261 aa3.18□□□□□ -1.9
MSD1YPL104W MCH4Q08268 501 aa3.18□□□□□ -1.9
MSD1YPL104W RAX1Q08760 435 aa3.18□□□□□ -1.9
MSD1YPL104W RRI1Q12468 440 aa3.18□□□□□ -1.9
MSD1YPL104W YJR112W-AQ3E743 109 aa3.18□□□□□ -1.9
MSD1YPL104W SEN1Q00416 2231 aaKnown RBP3.17□□□□□ -1.9
MSD1YPL104W SCEIP03882 235 aa3.17□□□□□ -1.9
MSD1YPL104W YML003WP0CF16 290 aa3.17□□□□□ -1.9
MSD1YPL104W CTA1P15202 515 aa3.17□□□□□ -1.9
MSD1YPL104W CDC23P16522 626 aa3.17□□□□□ -1.9
MSD1YPL104W LDB16P25587 256 aa3.17□□□□□ -1.9
MSD1YPL104W CPR3P25719 182 aa3.17□□□□□ -1.9
MSD1YPL104W COS9P36034 407 aa3.17□□□□□ -1.9
MSD1YPL104W SSH1P38353 490 aaKnown RBP3.17□□□□□ -1.9
MSD1YPL104W SEC24P40482 926 aaKnown RBP3.17□□□□□ -1.9
MSD1YPL104W TIR3P40552 269 aa3.17□□□□□ -1.9
MSD1YPL104W SYS1P41544 203 aa3.17□□□□□ -1.9
MSD1YPL104W MSY1P48527 492 aa3.17□□□□□ -1.9
MSD1YPL104W YIP4P53093 235 aa3.17□□□□□ -1.9
MSD1YPL104W ORM1P53224 222 aa3.17□□□□□ -1.9
MSD1YPL104W SLI1P53304 468 aa3.17□□□□□ -1.9
MSD1YPL104W MRPL50P53724 139 aa3.17□□□□□ -1.9
MSD1YPL104W AAH1P53909 347 aa3.17□□□□□ -1.9
MSD1YPL104W RSM10Q03201 203 aa3.17□□□□□ -1.9
MSD1YPL104W YDR209CQ03480 137 aa3.17□□□□□ -1.9
MSD1YPL104W YLR224WQ05947 369 aa3.17□□□□□ -1.9
MSD1YPL104W IZH3Q07959 543 aa3.17□□□□□ -1.9
MSD1YPL104W GRE1Q08969 168 aa3.17□□□□□ -1.9
MSD1YPL104W YPR053CQ6Q5F3 151 aa3.17□□□□□ -1.9
MSD1YPL104W YHR214C-EQ8TGK0 99 aa3.17□□□□□ -1.9
MSD1YPL104W YBR085C-AO43137 85 aa3.16□□□□□ -1.9
MSD1YPL104W CHO1P08456 276 aa3.16□□□□□ -1.9
MSD1YPL104W NAM2P11325 894 aa3.16□□□□□ -1.9
MSD1YPL104W NHP6BP11633 99 aaKnown RBP3.16□□□□□ -1.9
MSD1YPL104W MDH2P22133 377 aa3.16□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms