Protein–RNA interactions for Protein: P40339

RFC4, Replication factor C subunit 4, yeastyeast

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC4P40339 YML009W-BYML009W-B 477 nt18.24■□□□□ 0.51
RFC4P40339 NSR1YGR159C 1245 nt18.13■□□□□ 0.49
RFC4P40339 NOP1YDL014W 984 nt17.74■□□□□ 0.43
RFC4P40339 YKL036CYKL036C 393 nt16.36■□□□□ 0.21
RFC4P40339 MDJ1YFL016C 1536 nt16.09■□□□□ 0.17
RFC4P40339 Q0297Q0297 156 nt15.53■□□□□ 0.08
RFC4P40339 SRX1YKL086W 384 nt15.5■□□□□ 0.07
RFC4P40339 YJL027CYJL027C 417 nt15.28■□□□□ 0.04
RFC4P40339 SCS3YGL126W 1143 nt14.89□□□□□ -0.03
RFC4P40339 YCR051WYCR051W 669 nt14.71□□□□□ -0.05
RFC4P40339 DBP2YNL112W 1641 nt14.25□□□□□ -0.13
RFC4P40339 YOL085CYOL085C 342 nt14.18□□□□□ -0.14
RFC4P40339 TRN1tP(UGG)A 72 nt14.01□□□□□ -0.17
RFC4P40339 SUF9tP(UGG)F 72 nt14.01□□□□□ -0.17
RFC4P40339 SUF8tP(UGG)H 72 nt14.01□□□□□ -0.17
RFC4P40339 tP(UGG)LtP(UGG)L 72 nt14.01□□□□□ -0.17
RFC4P40339 SUF7tP(UGG)M 72 nt14.01□□□□□ -0.17
RFC4P40339 tP(UGG)N1tP(UGG)N1 72 nt14.01□□□□□ -0.17
RFC4P40339 tP(UGG)N2tP(UGG)N2 72 nt14.01□□□□□ -0.17
RFC4P40339 tP(UGG)O1tP(UGG)O1 72 nt14.01□□□□□ -0.17
RFC4P40339 SUF11tP(UGG)O2 72 nt14.01□□□□□ -0.17
RFC4P40339 PKP1YIL042C 1185 nt13.96□□□□□ -0.17
RFC4P40339 RPP1BYDL130W 321 nt13.94□□□□□ -0.18
RFC4P40339 CCC1YLR220W 969 nt13.87□□□□□ -0.19
RFC4P40339 YBR190WYBR190W 312 nt13.81□□□□□ -0.2
RFC4P40339 SSA3YBL075C 1950 nt13.51□□□□□ -0.25
RFC4P40339 RTC3YHR087W 336 nt13.44□□□□□ -0.26
RFC4P40339 RVS167YDR388W 1449 nt13.39□□□□□ -0.27
RFC4P40339 ATS1YAL020C 1002 nt13.33□□□□□ -0.28
RFC4P40339 SCJ1YMR214W 1134 nt13.33□□□□□ -0.28
RFC4P40339 PET122YER153C 765 nt13.31□□□□□ -0.28
RFC4P40339 tP(UGG)O3tP(UGG)O3 72 nt13.26□□□□□ -0.29
RFC4P40339 SCR1SCR1 522 nt13.17□□□□□ -0.3
RFC4P40339 PUT4YOR348C 1884 nt12.97□□□□□ -0.33
RFC4P40339 SHR5YOL110W 714 nt12.93□□□□□ -0.34
RFC4P40339 RRN5YLR141W 1092 nt12.92□□□□□ -0.34
RFC4P40339 YDJ1YNL064C 1230 nt12.83□□□□□ -0.36
RFC4P40339 YER088W-BYER088W-B 147 nt12.67□□□□□ -0.38
RFC4P40339 RSB1YOR049C 1065 nt12.66□□□□□ -0.38
RFC4P40339 URN1YPR152C 1398 nt12.56□□□□□ -0.4
RFC4P40339 DEP1YAL013W 1218 nt12.56□□□□□ -0.4
RFC4P40339 ARE1YCR048W 1833 nt12.55□□□□□ -0.4
RFC4P40339 GAR1YHR089C 618 nt12.54□□□□□ -0.4
RFC4P40339 POA1YBR022W 534 nt12.5□□□□□ -0.41
RFC4P40339 OPI9YLR338W 858 nt12.39□□□□□ -0.43
RFC4P40339 RPN10YHR200W 807 nt12.38□□□□□ -0.43
RFC4P40339 YHR049C-AYHR049C-A 297 nt12.37□□□□□ -0.43
RFC4P40339 YNL208WYNL208W 600 nt12.37□□□□□ -0.43
RFC4P40339 SAH1YER043C 1350 nt12.37□□□□□ -0.43
RFC4P40339 PST2YDR032C 597 nt12.34□□□□□ -0.43
RFC4P40339 BSC6YOL137W 1494 nt12.34□□□□□ -0.43
RFC4P40339 SPT5YML010W 3192 nt12.23□□□□□ -0.45
RFC4P40339 TIR1YER011W 765 nt12.12□□□□□ -0.47
RFC4P40339 SSA4YER103W 1929 nt12.05□□□□□ -0.48
RFC4P40339 BUD23YCR047C 828 nt12.03□□□□□ -0.48
RFC4P40339 PUN1YLR414C 792 nt12.03□□□□□ -0.48
RFC4P40339 YJR018WYJR018W 363 nt11.99□□□□□ -0.49
RFC4P40339 SSA1YAL005C 1929 nt11.98□□□□□ -0.49
RFC4P40339 PTC2YER089C 1395 nt11.91□□□□□ -0.5
RFC4P40339 NAB2YGL122C 1578 nt11.85□□□□□ -0.51
RFC4P40339 YKL097CYKL097C 411 nt11.85□□□□□ -0.51
RFC4P40339 SHU1YHL006C 453 nt11.84□□□□□ -0.51
RFC4P40339 YJR120WYJR120W 351 nt11.81□□□□□ -0.52
RFC4P40339 SRB2YHR041C 633 nt11.78□□□□□ -0.52
RFC4P40339 RPP2BYDR382W 333 nt11.75□□□□□ -0.53
RFC4P40339 MEP2YNL142W 1500 nt11.66□□□□□ -0.54
RFC4P40339 BDF1YLR399C 2061 nt11.66□□□□□ -0.54
RFC4P40339 YAL037C-BYAL037C-B 975 nt11.66□□□□□ -0.54
RFC4P40339 WWM1YFL010C 636 nt11.59□□□□□ -0.55
RFC4P40339 FIS1YIL065C 468 nt11.59□□□□□ -0.55
RFC4P40339 DAL1YIR027C 1383 nt11.57□□□□□ -0.56
RFC4P40339 INM2YDR287W 879 nt11.57□□□□□ -0.56
RFC4P40339 FPR4YLR449W 1179 nt11.54□□□□□ -0.56
RFC4P40339 YGR021WYGR021W 873 nt11.52□□□□□ -0.57
RFC4P40339 BDH2YAL061W 1254 nt11.52□□□□□ -0.57
RFC4P40339 TAT1YBR069C 1860 nt11.49□□□□□ -0.57
RFC4P40339 HOM6YJR139C 1080 nt11.48□□□□□ -0.57
RFC4P40339 PHO4YFR034C 939 nt11.46□□□□□ -0.57
RFC4P40339 YBL100CYBL100C 315 nt11.45□□□□□ -0.58
RFC4P40339 YPS1YLR120C 1710 nt11.45□□□□□ -0.58
RFC4P40339 MNP1YGL068W 585 nt11.43□□□□□ -0.58
RFC4P40339 DCW1YKL046C 1350 nt11.42□□□□□ -0.58
RFC4P40339 YFL021C-AYFL021C-A 855 nt11.4□□□□□ -0.58
RFC4P40339 YOR139CYOR139C 393 nt11.38□□□□□ -0.59
RFC4P40339 LSM3YLR438C-A 270 nt11.37□□□□□ -0.59
RFC4P40339 YHR165W-AYHR165W-A 312 nt11.34□□□□□ -0.59
RFC4P40339 FUN26YAL022C 1554 nt11.32□□□□□ -0.6
RFC4P40339 RKM5YLR137W 1104 nt11.31□□□□□ -0.6
RFC4P40339 TRM9YML014W 840 nt11.3□□□□□ -0.6
RFC4P40339 YMR090WYMR090W 684 nt11.29□□□□□ -0.6
RFC4P40339 EMI2YDR516C 1503 nt11.29□□□□□ -0.6
RFC4P40339 YBR220CYBR220C 1683 nt11.28□□□□□ -0.6
RFC4P40339 YDR095CYDR095C 411 nt11.28□□□□□ -0.6
RFC4P40339 NPL3YDR432W 1245 nt11.28□□□□□ -0.6
RFC4P40339 YOL037CYOL037C 354 nt11.24□□□□□ -0.61
RFC4P40339 CCT6YDR188W 1641 nt11.18□□□□□ -0.62
RFC4P40339 YDL221WYDL221W 552 nt11.16□□□□□ -0.62
RFC4P40339 ALF1YNL148C 765 nt11.15□□□□□ -0.62
RFC4P40339 SDH1YKL148C 1923 nt11.13□□□□□ -0.63
RFC4P40339 PAC11YDR488C 1602 nt11.13□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 30 ms