RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W COX13P32799 129 aa1.79□□□□□ -2.12
UBP1YDL122W ECT1P33412 323 aa1.79□□□□□ -2.12
UBP1YDL122W PHD1P36093 366 aa1.79□□□□□ -2.12
UBP1YDL122W YCR041WP37265 110 aa1.79□□□□□ -2.12
UBP1YDL122W PAC2P39937 518 aa1.79□□□□□ -2.12
UBP1YDL122W HAT2P39984 401 aa1.79□□□□□ -2.12
UBP1YDL122W SCC4P40090 624 aa1.79□□□□□ -2.12
UBP1YDL122W LYS12P40495 371 aaKnown RBP1.79□□□□□ -2.12
UBP1YDL122W CDC40P40968 455 aaPredicted RBP1.79□□□□□ -2.12
UBP1YDL122W GLR1P41921 483 aaKnown RBP1.79□□□□□ -2.12
UBP1YDL122W SMP3Q04174 516 aa1.79□□□□□ -2.12
UBP1YDL122W CAC2Q04199 468 aa1.79□□□□□ -2.12
UBP1YDL122W COQ11Q05892 277 aa1.79□□□□□ -2.12
UBP1YDL122W ASA1Q06822 443 aa1.79□□□□□ -2.12
UBP1YDL122W LDS2Q08218 356 aa1.79□□□□□ -2.12
UBP1YDL122W YPR011CQ12251 326 aa1.79□□□□□ -2.12
UBP1YDL122W YPR1Q12458 312 aa1.79□□□□□ -2.12
UBP1YDL122W QCR6P00127 147 aa1.78□□□□□ -2.12
UBP1YDL122W COQ3P27680 312 aa1.78□□□□□ -2.12
UBP1YDL122W CHK1P38147 527 aa1.78□□□□□ -2.12
UBP1YDL122W GPI18P38211 433 aa1.78□□□□□ -2.12
UBP1YDL122W ECM8P38246 354 aa1.78□□□□□ -2.12
UBP1YDL122W MTC6P38849 526 aa1.78□□□□□ -2.12
UBP1YDL122W SHO1P40073 367 aa1.78□□□□□ -2.12
UBP1YDL122W LCP5P40079 357 aaPredicted RBP1.78□□□□□ -2.12
UBP1YDL122W YMR134WP40207 237 aa1.78□□□□□ -2.12
UBP1YDL122W PSA1P41940 361 aaKnown RBP1.78□□□□□ -2.12
UBP1YDL122W MPA43P53583 542 aaPredicted RBP1.78□□□□□ -2.12
UBP1YDL122W YMR102CQ03177 834 aa1.78□□□□□ -2.12
UBP1YDL122W RVB1Q03940 463 aaKnown RBP1.78□□□□□ -2.12
UBP1YDL122W ATG38Q05789 226 aaKnown RBP1.78□□□□□ -2.12
UBP1YDL122W LOT6Q07923 191 aa1.78□□□□□ -2.12
UBP1YDL122W SGT1Q08446 395 aa1.78□□□□□ -2.12
UBP1YDL122W SKI7Q08491 747 aaPredicted RBP1.78□□□□□ -2.12
UBP1YDL122W ORT1Q12375 292 aa1.78□□□□□ -2.12
UBP1YDL122W PSF1Q12488 208 aa1.78□□□□□ -2.12
UBP1YDL122W COX2P00410 251 aa1.78□□□□□ -2.12
UBP1YDL122W TPK3P05986 398 aa1.78□□□□□ -2.12
UBP1YDL122W CKI1P20485 582 aa1.78□□□□□ -2.12
UBP1YDL122W LSB5P25369 354 aa1.78□□□□□ -2.12
UBP1YDL122W CSM1P25651 190 aa1.78□□□□□ -2.12
UBP1YDL122W MSN4P33749 630 aa1.78□□□□□ -2.12
UBP1YDL122W HOT13P36078 116 aa1.78□□□□□ -2.12
UBP1YDL122W YFR035CP43608 114 aa1.78□□□□□ -2.12
UBP1YDL122W RPS12P48589 143 aaKnown RBP1.78□□□□□ -2.12
UBP1YDL122W LSG1P53145 640 aaKnown RBP1.78□□□□□ -2.12
UBP1YDL122W CGR1P53188 120 aa1.78□□□□□ -2.12
UBP1YDL122W YGR168CP53293 376 aa1.78□□□□□ -2.12
UBP1YDL122W ATP23P53722 227 aa1.78□□□□□ -2.12
UBP1YDL122W SAM50P53969 484 aa1.78□□□□□ -2.12
UBP1YDL122W BET5Q03630 159 aa1.78□□□□□ -2.12
UBP1YDL122W GPN3Q06543 272 aa1.78□□□□□ -2.12
UBP1YDL122W AFT2Q08957 416 aa1.78□□□□□ -2.12
UBP1YDL122W BTS1Q12051 335 aa1.78□□□□□ -2.12
UBP1YDL122W YPR064WQ12492 139 aa1.78□□□□□ -2.12
UBP1YDL122W ADF1Q2V2Q1 113 aa1.78□□□□□ -2.12
UBP1YDL122W TIM9O74700 87 aa1.77□□□□□ -2.13
UBP1YDL122W GDH1P07262 454 aaKnown RBP1.77□□□□□ -2.13
UBP1YDL122W COS2P0CX12 379 aa1.77□□□□□ -2.13
UBP1YDL122W COS3P0CX13 379 aa1.77□□□□□ -2.13
UBP1YDL122W RPS16AP0CX51 143 aaKnown RBP1.77□□□□□ -2.13
UBP1YDL122W RPS16BP0CX52 143 aaKnown RBP1.77□□□□□ -2.13
UBP1YDL122W NSP1P14907 823 aaKnown RBP1.77□□□□□ -2.13
UBP1YDL122W CDC23P16522 626 aa1.77□□□□□ -2.13
UBP1YDL122W MER1P16523 270 aa1.77□□□□□ -2.13
UBP1YDL122W RPB5P20434 215 aa1.77□□□□□ -2.13
UBP1YDL122W DEG1P31115 442 aaKnown RBP1.77□□□□□ -2.13
UBP1YDL122W SUA5P32579 426 aa1.77□□□□□ -2.13
UBP1YDL122W YOR062CP36025 268 aa1.77□□□□□ -2.13
UBP1YDL122W FRE2P36033 711 aa1.77□□□□□ -2.13
UBP1YDL122W PEX32P38292 413 aa1.77□□□□□ -2.13
UBP1YDL122W RCK2P38623 610 aa1.77□□□□□ -2.13
UBP1YDL122W AIM10P39965 576 aaKnown RBP1.77□□□□□ -2.13
UBP1YDL122W SEC9P40357 651 aa1.77□□□□□ -2.13
UBP1YDL122W COS4P43542 379 aa1.77□□□□□ -2.13
UBP1YDL122W RPA43P46669 326 aa1.77□□□□□ -2.13
UBP1YDL122W SYF2P53277 215 aaPredicted RBP1.77□□□□□ -2.13
UBP1YDL122W MTM1P53320 366 aa1.77□□□□□ -2.13
UBP1YDL122W NCE101Q02820 53 aa1.77□□□□□ -2.13
UBP1YDL122W MSS11Q03825 758 aa1.77□□□□□ -2.13
UBP1YDL122W GET4Q12125 312 aa1.77□□□□□ -2.13
UBP1YDL122W YLR112WQ12130 139 aa1.77□□□□□ -2.13
UBP1YDL122W YNL162W-AQ3E7A8 72 aa1.77□□□□□ -2.13
UBP1YDL122W SPO12P17123 173 aa1.77□□□□□ -2.13
UBP1YDL122W YCR100CP25606 316 aa1.77□□□□□ -2.13
UBP1YDL122W RPL5P26321 297 aaKnown RBP1.77□□□□□ -2.13
UBP1YDL122W VMA5P31412 392 aaKnown RBP1.77□□□□□ -2.13
UBP1YDL122W YPK3P38070 525 aa1.77□□□□□ -2.13
UBP1YDL122W ECM34P38728 170 aa1.77□□□□□ -2.13
UBP1YDL122W SMF2P38778 549 aa1.77□□□□□ -2.13
UBP1YDL122W FMC1P40491 155 aa1.77□□□□□ -2.13
UBP1YDL122W INA22P40576 216 aa1.77□□□□□ -2.13
UBP1YDL122W RTS2P40962 232 aa1.77□□□□□ -2.13
UBP1YDL122W BNA6P43619 295 aa1.77□□□□□ -2.13
UBP1YDL122W YPT11P48559 417 aa1.77□□□□□ -2.13
UBP1YDL122W YNL181WP53878 407 aa1.77□□□□□ -2.13
UBP1YDL122W GIM3P53900 129 aa1.77□□□□□ -2.13
UBP1YDL122W IRC15Q02733 499 aa1.77□□□□□ -2.13
UBP1YDL122W NHP10Q03435 203 aa1.77□□□□□ -2.13
UBP1YDL122W NAT4Q04751 285 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms