Protein–RNA interactions for Protein: P46669

RPA43, DNA-directed RNA polymerase I subunit RPA43, yeastyeast

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA43P46669 YML009W-BYML009W-B 477 nt16.08■□□□□ 0.16
RPA43P46669 NSR1YGR159C 1245 nt15.87■□□□□ 0.13
RPA43P46669 NOP1YDL014W 984 nt15.73■□□□□ 0.11
RPA43P46669 YKL036CYKL036C 393 nt14.63□□□□□ -0.07
RPA43P46669 MDJ1YFL016C 1536 nt14.05□□□□□ -0.16
RPA43P46669 Q0297Q0297 156 nt13.8□□□□□ -0.2
RPA43P46669 SRX1YKL086W 384 nt13.72□□□□□ -0.21
RPA43P46669 YJL027CYJL027C 417 nt13.67□□□□□ -0.22
RPA43P46669 SCS3YGL126W 1143 nt13.36□□□□□ -0.27
RPA43P46669 YCR051WYCR051W 669 nt13.01□□□□□ -0.33
RPA43P46669 SSA3YBL075C 1950 nt12.66□□□□□ -0.38
RPA43P46669 YOL085CYOL085C 342 nt12.64□□□□□ -0.39
RPA43P46669 PKP1YIL042C 1185 nt12.4□□□□□ -0.42
RPA43P46669 RPP1BYDL130W 321 nt12.38□□□□□ -0.43
RPA43P46669 DBP2YNL112W 1641 nt12.36□□□□□ -0.43
RPA43P46669 TRN1tP(UGG)A 72 nt12.32□□□□□ -0.44
RPA43P46669 SUF9tP(UGG)F 72 nt12.32□□□□□ -0.44
RPA43P46669 SUF8tP(UGG)H 72 nt12.32□□□□□ -0.44
RPA43P46669 tP(UGG)LtP(UGG)L 72 nt12.32□□□□□ -0.44
RPA43P46669 SUF7tP(UGG)M 72 nt12.32□□□□□ -0.44
RPA43P46669 tP(UGG)N1tP(UGG)N1 72 nt12.32□□□□□ -0.44
RPA43P46669 tP(UGG)N2tP(UGG)N2 72 nt12.32□□□□□ -0.44
RPA43P46669 tP(UGG)O1tP(UGG)O1 72 nt12.32□□□□□ -0.44
RPA43P46669 SUF11tP(UGG)O2 72 nt12.32□□□□□ -0.44
RPA43P46669 YBR190WYBR190W 312 nt12.18□□□□□ -0.46
RPA43P46669 CCC1YLR220W 969 nt12.16□□□□□ -0.46
RPA43P46669 SCJ1YMR214W 1134 nt12.06□□□□□ -0.48
RPA43P46669 ATS1YAL020C 1002 nt11.99□□□□□ -0.49
RPA43P46669 RTC3YHR087W 336 nt11.88□□□□□ -0.51
RPA43P46669 PET122YER153C 765 nt11.78□□□□□ -0.52
RPA43P46669 SCR1SCR1 522 nt11.74□□□□□ -0.53
RPA43P46669 RVS167YDR388W 1449 nt11.73□□□□□ -0.53
RPA43P46669 tP(UGG)O3tP(UGG)O3 72 nt11.7□□□□□ -0.54
RPA43P46669 PUT4YOR348C 1884 nt11.56□□□□□ -0.56
RPA43P46669 RRN5YLR141W 1092 nt11.45□□□□□ -0.58
RPA43P46669 YDJ1YNL064C 1230 nt11.34□□□□□ -0.59
RPA43P46669 SHR5YOL110W 714 nt11.34□□□□□ -0.59
RPA43P46669 RSB1YOR049C 1065 nt11.28□□□□□ -0.6
RPA43P46669 YER088W-BYER088W-B 147 nt11.24□□□□□ -0.61
RPA43P46669 ARE1YCR048W 1833 nt11.14□□□□□ -0.63
RPA43P46669 POA1YBR022W 534 nt11.13□□□□□ -0.63
RPA43P46669 PST2YDR032C 597 nt11.07□□□□□ -0.64
RPA43P46669 BSC6YOL137W 1494 nt11.03□□□□□ -0.64
RPA43P46669 YHR049C-AYHR049C-A 297 nt11.02□□□□□ -0.65
RPA43P46669 GAR1YHR089C 618 nt11.02□□□□□ -0.65
RPA43P46669 SPT5YML010W 3192 nt11.02□□□□□ -0.65
RPA43P46669 SSA4YER103W 1929 nt10.98□□□□□ -0.65
RPA43P46669 SAH1YER043C 1350 nt10.92□□□□□ -0.66
RPA43P46669 DEP1YAL013W 1218 nt10.91□□□□□ -0.66
RPA43P46669 URN1YPR152C 1398 nt10.9□□□□□ -0.66
RPA43P46669 RPN10YHR200W 807 nt10.83□□□□□ -0.68
RPA43P46669 OPI9YLR338W 858 nt10.83□□□□□ -0.68
RPA43P46669 YNL208WYNL208W 600 nt10.81□□□□□ -0.68
RPA43P46669 YKL097CYKL097C 411 nt10.73□□□□□ -0.69
RPA43P46669 BUD23YCR047C 828 nt10.71□□□□□ -0.69
RPA43P46669 PAC11YDR488C 1602 nt10.66□□□□□ -0.7
RPA43P46669 TIR1YER011W 765 nt10.66□□□□□ -0.7
RPA43P46669 BDF1YLR399C 2061 nt10.63□□□□□ -0.71
RPA43P46669 NVJ2YPR091C 2313 nt10.61□□□□□ -0.71
RPA43P46669 SHU1YHL006C 453 nt10.58□□□□□ -0.72
RPA43P46669 PUN1YLR414C 792 nt10.54□□□□□ -0.72
RPA43P46669 YJL225CYJL225C 5277 nt10.52□□□□□ -0.73
RPA43P46669 PTC2YER089C 1395 nt10.51□□□□□ -0.73
RPA43P46669 TAT1YBR069C 1860 nt10.49□□□□□ -0.73
RPA43P46669 NAB2YGL122C 1578 nt10.48□□□□□ -0.73
RPA43P46669 SSA1YAL005C 1929 nt10.47□□□□□ -0.73
RPA43P46669 MEP2YNL142W 1500 nt10.43□□□□□ -0.74
RPA43P46669 YJR018WYJR018W 363 nt10.42□□□□□ -0.74
RPA43P46669 FPS1YLL043W 2010 nt10.41□□□□□ -0.74
RPA43P46669 RDN37-1RDN37-1 5354 nt10.34□□□□□ -0.75
RPA43P46669 RDN37-2RDN37-2 5354 nt10.34□□□□□ -0.75
RPA43P46669 YAL037C-BYAL037C-B 975 nt10.33□□□□□ -0.76
RPA43P46669 RPP2BYDR382W 333 nt10.28□□□□□ -0.76
RPA43P46669 SRB2YHR041C 633 nt10.28□□□□□ -0.76
RPA43P46669 YJR120WYJR120W 351 nt10.26□□□□□ -0.77
RPA43P46669 FIS1YIL065C 468 nt10.25□□□□□ -0.77
RPA43P46669 YGR021WYGR021W 873 nt10.24□□□□□ -0.77
RPA43P46669 YOR139CYOR139C 393 nt10.24□□□□□ -0.77
RPA43P46669 DCW1YKL046C 1350 nt10.23□□□□□ -0.77
RPA43P46669 DAL1YIR027C 1383 nt10.22□□□□□ -0.77
RPA43P46669 WWM1YFL010C 636 nt10.19□□□□□ -0.78
RPA43P46669 NPL3YDR432W 1245 nt10.17□□□□□ -0.78
RPA43P46669 HOM6YJR139C 1080 nt10.17□□□□□ -0.78
RPA43P46669 FPR4YLR449W 1179 nt10.17□□□□□ -0.78
RPA43P46669 YPS1YLR120C 1710 nt10.16□□□□□ -0.78
RPA43P46669 YBR220CYBR220C 1683 nt10.13□□□□□ -0.79
RPA43P46669 YMR090WYMR090W 684 nt10.13□□□□□ -0.79
RPA43P46669 MNP1YGL068W 585 nt10.12□□□□□ -0.79
RPA43P46669 PHO4YFR034C 939 nt10.11□□□□□ -0.79
RPA43P46669 EMI2YDR516C 1503 nt10.09□□□□□ -0.79
RPA43P46669 YHR165W-AYHR165W-A 312 nt10.09□□□□□ -0.79
RPA43P46669 YFL021C-AYFL021C-A 855 nt10.08□□□□□ -0.8
RPA43P46669 BDH2YAL061W 1254 nt10.08□□□□□ -0.8
RPA43P46669 YOL037CYOL037C 354 nt10.08□□□□□ -0.8
RPA43P46669 INM2YDR287W 879 nt10.05□□□□□ -0.8
RPA43P46669 RKM5YLR137W 1104 nt10.03□□□□□ -0.8
RPA43P46669 LSM3YLR438C-A 270 nt9.99□□□□□ -0.81
RPA43P46669 SDH1YKL148C 1923 nt9.98□□□□□ -0.81
RPA43P46669 YDR095CYDR095C 411 nt9.98□□□□□ -0.81
RPA43P46669 YDL221WYDL221W 552 nt9.97□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms