RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	RTS2	P40962	232 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	CDC40	P40968	455 aa	Predicted RBP	5.69	□□□□□ -1.5
TIF1	YKR059W	SHY1	P53266	389 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	YDR209C	Q03480	137 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	RVB1	Q03940	463 aa	Known RBP	5.69	□□□□□ -1.5
TIF1	YKR059W	ORT1	Q12375	292 aa		5.69	□□□□□ -1.5
TIF1	YKR059W	AIM45	Q12480	344 aa	Known RBP	5.69	□□□□□ -1.5
TIF1	YKR059W	HEM2	P05373	342 aa		5.68	□□□□□ -1.5
TIF1	YKR059W	RAD7	P06779	565 aa		5.68	□□□□□ -1.5
TIF1	YKR059W	RPL5	P26321	297 aa	Known RBP	5.68	□□□□□ -1.5
TIF1	YKR059W	ECM15	P35195	104 aa		5.68	□□□□□ -1.5
TIF1	YKR059W	MRX5	P47007	382 aa		5.68	□□□□□ -1.5
TIF1	YKR059W	TIS11	P47977	285 aa		5.68	□□□□□ -1.5
TIF1	YKR059W	SML1	Q04964	104 aa		5.68	□□□□□ -1.5
TIF1	YKR059W	MMT2	Q08970	484 aa		5.68	□□□□□ -1.5
TIF1	YKR059W	YLR112W	Q12130	139 aa		5.68	□□□□□ -1.5
TIF1	YKR059W	RIO1	Q12196	484 aa	Known RBP	5.68	□□□□□ -1.5
TIF1	YKR059W	MXR2	P25566	168 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	SUI1	P32911	108 aa	Known RBP	5.67	□□□□□ -1.5
TIF1	YKR059W	UBC6	P33296	250 aa	Predicted RBP	5.67	□□□□□ -1.5
TIF1	YKR059W	FET3	P38993	636 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	VPS52	P39904	641 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	SPR6	Q01684	191 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	GOT1	Q03554	138 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	YDR415C	Q04033	374 aa	Predicted RBP	5.67	□□□□□ -1.5
TIF1	YKR059W	YMR027W	Q04371	470 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	YLR177W	Q06251	628 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	YEH2	Q07950	538 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	YDL009C	Q12210	107 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	YOR097C	Q12274	175 aa	Predicted RBP	5.67	□□□□□ -1.5
TIF1	YKR059W	RGT2	Q12300	763 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	YOP1	Q12402	180 aa		5.67	□□□□□ -1.5
TIF1	YKR059W	SEC16	P48415	2195 aa	Known RBP	5.67	□□□□□ -1.5
TIF1	YKR059W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
TIF1	YKR059W	HEM15	P16622	393 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	PET123	P17558	318 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	SUA5	P32579	426 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	RPT5	P33297	434 aa	Known RBP	5.66	□□□□□ -1.5
TIF1	YKR059W	SHO1	P40073	367 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	BIO3	P50277	480 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	YNR048W	P53740	393 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	ODC1	Q03028	310 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	YMR102C	Q03177	834 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	ATG38	Q05789	226 aa	Known RBP	5.66	□□□□□ -1.5
TIF1	YKR059W	GEP3	Q08622	556 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	TIM18	Q08749	192 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	YOR376W	Q08900	122 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	YPR011C	Q12251	326 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	YRM1	Q12340	786 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	NCA2	Q12374	616 aa		5.66	□□□□□ -1.5
TIF1	YKR059W	SPT3	P06844	337 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	CBF1	P17106	351 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	ILV6	P25605	309 aa	Known RBP	5.65	□□□□□ -1.5
TIF1	YKR059W	DEG1	P31115	442 aa	Known RBP	5.65	□□□□□ -1.5
TIF1	YKR059W	DOA4	P32571	926 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	FMC1	P40491	155 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	BNA6	P43619	295 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	GIM3	P53900	129 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	NAT4	Q04751	285 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	SRL2	Q12020	392 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	SIA1	Q12212	622 aa		5.65	□□□□□ -1.5
TIF1	YKR059W	TPT1	Q12272	230 aa	Known RBP	5.65	□□□□□ -1.5
TIF1	YKR059W	CMD1	P06787	147 aa	Known RBP	5.64	□□□□□ -1.51
TIF1	YKR059W	GDH1	P07262	454 aa	Known RBP	5.64	□□□□□ -1.51
TIF1	YKR059W	GPI12	P23797	304 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	STP22	P25604	385 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	PTM1	P32857	523 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	SPC34	P36131	295 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	CCT4	P39078	528 aa	Known RBP	5.64	□□□□□ -1.51
TIF1	YKR059W	YIL067C	P40514	678 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	COX16	P47081	118 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	SDT1	P53078	280 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	IZH1	Q03419	316 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	YPR172W	Q06608	200 aa		5.64	□□□□□ -1.51
TIF1	YKR059W	RRP40	Q08285	240 aa	Known RBP	5.64	□□□□□ -1.51
TIF1	YKR059W	MER1	P16523	270 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	TIP1	P27654	210 aa	Predicted RBP	5.63	□□□□□ -1.51
TIF1	YKR059W	ACB1	P31787	87 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	KRE6	P32486	720 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	VAM7	P32912	316 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.63	□□□□□ -1.51	not detected
TIF1	YKR059W	SDH3	P33421	198 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	YKL071W	P36086	256 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	TDA11	P38854	504 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	RBG1	P39729	369 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	AIM10	P39965	576 aa	Known RBP	5.63	□□□□□ -1.51
TIF1	YKR059W	PMT4	P46971	762 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	HPT1	Q04178	221 aa	Known RBP	5.63	□□□□□ -1.51
TIF1	YKR059W	YOL019W	Q08157	551 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	ADF1	Q2V2Q1	113 aa		5.63	□□□□□ -1.51
TIF1	YKR059W	MSN4	P33749	630 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	MRPS5	P33759	307 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	RPC37	P36121	282 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	PEX32	P38292	413 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	INA22	P40576	216 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	PRM10	P42946	383 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	MDV1	P47025	714 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	GWT1	P47026	490 aa		5.62	□□□□□ -1.51
TIF1	YKR059W	SEH1	P53011	349 aa	Known RBP	5.62	□□□□□ -1.51
TIF1	YKR059W	TAF6	P53040	516 aa		5.62	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 29.1 ms