Protein–RNA interactions for Protein: P47977

TIS11, mRNA decay factor CTH2, yeastyeast

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TIS11P47977 YML009W-BYML009W-B 477 nt20.05■□□□□ 0.8
TIS11P47977 NSR1YGR159C 1245 nt19.96■□□□□ 0.79
TIS11P47977 NOP1YDL014W 984 nt19.36■□□□□ 0.69
TIS11P47977 MDJ1YFL016C 1536 nt17.92■□□□□ 0.46
TIS11P47977 YKL036CYKL036C 393 nt17.84■□□□□ 0.45
TIS11P47977 Q0297Q0297 156 nt16.99■□□□□ 0.31
TIS11P47977 SRX1YKL086W 384 nt16.98■□□□□ 0.31
TIS11P47977 YJL027CYJL027C 417 nt16.64■□□□□ 0.25
TIS11P47977 SCS3YGL126W 1143 nt16.26■□□□□ 0.19
TIS11P47977 YCR051WYCR051W 669 nt16.1■□□□□ 0.17
TIS11P47977 DBP2YNL112W 1641 nt15.85■□□□□ 0.13
TIS11P47977 YOL085CYOL085C 342 nt15.51■□□□□ 0.07
TIS11P47977 TRN1tP(UGG)A 72 nt15.45■□□□□ 0.06
TIS11P47977 SUF9tP(UGG)F 72 nt15.45■□□□□ 0.06
TIS11P47977 SUF8tP(UGG)H 72 nt15.45■□□□□ 0.06
TIS11P47977 tP(UGG)LtP(UGG)L 72 nt15.45■□□□□ 0.06
TIS11P47977 SUF7tP(UGG)M 72 nt15.45■□□□□ 0.06
TIS11P47977 tP(UGG)N1tP(UGG)N1 72 nt15.45■□□□□ 0.06
TIS11P47977 tP(UGG)N2tP(UGG)N2 72 nt15.45■□□□□ 0.06
TIS11P47977 tP(UGG)O1tP(UGG)O1 72 nt15.45■□□□□ 0.06
TIS11P47977 SUF11tP(UGG)O2 72 nt15.45■□□□□ 0.06
TIS11P47977 PKP1YIL042C 1185 nt15.32■□□□□ 0.04
TIS11P47977 CCC1YLR220W 969 nt15.28■□□□□ 0.04
TIS11P47977 RPP1BYDL130W 321 nt15.25■□□□□ 0.03
TIS11P47977 YBR190WYBR190W 312 nt15.21■□□□□ 0.03
TIS11P47977 RTC3YHR087W 336 nt14.86□□□□□ -0.03
TIS11P47977 SCJ1YMR214W 1134 nt14.8□□□□□ -0.04
TIS11P47977 RVS167YDR388W 1449 nt14.7□□□□□ -0.06
TIS11P47977 PET122YER153C 765 nt14.64□□□□□ -0.07
TIS11P47977 tP(UGG)O3tP(UGG)O3 72 nt14.58□□□□□ -0.08
TIS11P47977 ATS1YAL020C 1002 nt14.49□□□□□ -0.09
TIS11P47977 SCR1SCR1 522 nt14.33□□□□□ -0.12
TIS11P47977 SHR5YOL110W 714 nt14.24□□□□□ -0.13
TIS11P47977 RRN5YLR141W 1092 nt14.18□□□□□ -0.14
TIS11P47977 YDJ1YNL064C 1230 nt14.06□□□□□ -0.16
TIS11P47977 PUT4YOR348C 1884 nt13.96□□□□□ -0.17
TIS11P47977 DEP1YAL013W 1218 nt13.93□□□□□ -0.18
TIS11P47977 YER088W-BYER088W-B 147 nt13.92□□□□□ -0.18
TIS11P47977 URN1YPR152C 1398 nt13.92□□□□□ -0.18
TIS11P47977 RSB1YOR049C 1065 nt13.83□□□□□ -0.2
TIS11P47977 GAR1YHR089C 618 nt13.8□□□□□ -0.2
TIS11P47977 OPI9YLR338W 858 nt13.72□□□□□ -0.21
TIS11P47977 SAH1YER043C 1350 nt13.71□□□□□ -0.22
TIS11P47977 ARE1YCR048W 1833 nt13.69□□□□□ -0.22
TIS11P47977 YNL208WYNL208W 600 nt13.62□□□□□ -0.23
TIS11P47977 RPN10YHR200W 807 nt13.59□□□□□ -0.23
TIS11P47977 POA1YBR022W 534 nt13.5□□□□□ -0.25
TIS11P47977 YHR049C-AYHR049C-A 297 nt13.49□□□□□ -0.25
TIS11P47977 PST2YDR032C 597 nt13.46□□□□□ -0.25
TIS11P47977 TIR1YER011W 765 nt13.33□□□□□ -0.28
TIS11P47977 PUN1YLR414C 792 nt13.28□□□□□ -0.28
TIS11P47977 SSA1YAL005C 1929 nt13.25□□□□□ -0.29
TIS11P47977 YJR018WYJR018W 363 nt13.25□□□□□ -0.29
TIS11P47977 BSC6YOL137W 1494 nt13.23□□□□□ -0.29
TIS11P47977 SSA3YBL075C 1950 nt13.2□□□□□ -0.3
TIS11P47977 PTC2YER089C 1395 nt13.19□□□□□ -0.3
TIS11P47977 YJR120WYJR120W 351 nt13.17□□□□□ -0.3
TIS11P47977 BUD23YCR047C 828 nt13.14□□□□□ -0.31
TIS11P47977 SRB2YHR041C 633 nt13.13□□□□□ -0.31
TIS11P47977 NAB2YGL122C 1578 nt12.98□□□□□ -0.33
TIS11P47977 SHU1YHL006C 453 nt12.96□□□□□ -0.33
TIS11P47977 FIS1YIL065C 468 nt12.9□□□□□ -0.34
TIS11P47977 RPP2BYDR382W 333 nt12.88□□□□□ -0.35
TIS11P47977 YKL097CYKL097C 411 nt12.82□□□□□ -0.36
TIS11P47977 DAL1YIR027C 1383 nt12.81□□□□□ -0.36
TIS11P47977 YAL037C-BYAL037C-B 975 nt12.81□□□□□ -0.36
TIS11P47977 FPR4YLR449W 1179 nt12.79□□□□□ -0.36
TIS11P47977 WWM1YFL010C 636 nt12.78□□□□□ -0.36
TIS11P47977 INM2YDR287W 879 nt12.74□□□□□ -0.37
TIS11P47977 SPT5YML010W 3192 nt12.74□□□□□ -0.37
TIS11P47977 PHO4YFR034C 939 nt12.73□□□□□ -0.37
TIS11P47977 BDH2YAL061W 1254 nt12.68□□□□□ -0.38
TIS11P47977 YBL100CYBL100C 315 nt12.66□□□□□ -0.38
TIS11P47977 HOM6YJR139C 1080 nt12.61□□□□□ -0.39
TIS11P47977 MNP1YGL068W 585 nt12.59□□□□□ -0.39
TIS11P47977 YGR021WYGR021W 873 nt12.57□□□□□ -0.4
TIS11P47977 FUN26YAL022C 1554 nt12.52□□□□□ -0.4
TIS11P47977 YPS1YLR120C 1710 nt12.51□□□□□ -0.41
TIS11P47977 YFL021C-AYFL021C-A 855 nt12.5□□□□□ -0.41
TIS11P47977 LSM3YLR438C-A 270 nt12.47□□□□□ -0.41
TIS11P47977 YOR139CYOR139C 393 nt12.43□□□□□ -0.42
TIS11P47977 YDR095CYDR095C 411 nt12.42□□□□□ -0.42
TIS11P47977 TRM9YML014W 840 nt12.42□□□□□ -0.42
TIS11P47977 RKM5YLR137W 1104 nt12.41□□□□□ -0.42
TIS11P47977 MEP2YNL142W 1500 nt12.41□□□□□ -0.42
TIS11P47977 CCT6YDR188W 1641 nt12.34□□□□□ -0.43
TIS11P47977 YHR165W-AYHR165W-A 312 nt12.34□□□□□ -0.43
TIS11P47977 ALF1YNL148C 765 nt12.29□□□□□ -0.44
TIS11P47977 DCW1YKL046C 1350 nt12.29□□□□□ -0.44
TIS11P47977 SSA4YER103W 1929 nt12.25□□□□□ -0.45
TIS11P47977 YOL037CYOL037C 354 nt12.23□□□□□ -0.45
TIS11P47977 NPL3YDR432W 1245 nt12.22□□□□□ -0.45
TIS11P47977 PTP1YDL230W 1008 nt12.21□□□□□ -0.45
TIS11P47977 SIS1YNL007C 1059 nt12.17□□□□□ -0.46
TIS11P47977 SUF2tP(AGG)C 72 nt12.16□□□□□ -0.46
TIS11P47977 SUF10tP(AGG)N 72 nt12.16□□□□□ -0.46
TIS11P47977 RPP2AYOL039W 321 nt12.16□□□□□ -0.46
TIS11P47977 CAC2YML102W 1407 nt12.13□□□□□ -0.47
TIS11P47977 EMI2YDR516C 1503 nt12.06□□□□□ -0.48
TIS11P47977 ART5YGR068C 1761 nt12.04□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms