RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W YAP7Q08182 245 aa2.21□□□□□ -2.06
SDC25YLL016W TPT1Q12272 230 aaKnown RBP2.21□□□□□ -2.06
SDC25YLL016W RRP42Q12277 265 aaPredicted RBP2.21□□□□□ -2.06
SDC25YLL016W YLR111WQ12528 110 aa2.21□□□□□ -2.06
SDC25YLL016W SSC1P0CS90 654 aaKnown RBP2.21□□□□□ -2.06
SDC25YLL016W CAP2P13517 287 aa2.21□□□□□ -2.06
SDC25YLL016W SLY1P22213 666 aa2.21□□□□□ -2.06
SDC25YLL016W EXG1P23776 448 aaKnown RBP2.21□□□□□ -2.06
SDC25YLL016W RPL16BP26785 198 aaKnown RBP2.21□□□□□ -2.06
SDC25YLL016W TIP1P27654 210 aaPredicted RBP2.21□□□□□ -2.06
SDC25YLL016W NUP2P32499 720 aa2.21□□□□□ -2.06
SDC25YLL016W AST1P35183 429 aa2.21□□□□□ -2.06
SDC25YLL016W ECM15P35195 104 aa2.21□□□□□ -2.06
SDC25YLL016W TVP38P36164 337 aa2.21□□□□□ -2.06
SDC25YLL016W GPX2P38143 162 aa2.21□□□□□ -2.06
SDC25YLL016W CHK1P38147 527 aa2.21□□□□□ -2.06
SDC25YLL016W RTS2P40962 232 aa2.21□□□□□ -2.06
SDC25YLL016W GAT1P43574 510 aa2.21□□□□□ -2.06
SDC25YLL016W RTT101P47050 842 aa2.21□□□□□ -2.06
SDC25YLL016W POP6P53218 158 aa2.21□□□□□ -2.06
SDC25YLL016W YPL077CQ02831 240 aa2.21□□□□□ -2.06
SDC25YLL016W SPO77Q06134 477 aa2.21□□□□□ -2.06
SDC25YLL016W YLR108CQ12259 485 aa2.21□□□□□ -2.06
SDC25YLL016W BEM2P39960 2167 aaKnown RBP2.21□□□□□ -2.06
SDC25YLL016W HTB1P02293 131 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W HTB2P02294 131 aa2.2□□□□□ -2.06
SDC25YLL016W YMR31P19955 123 aa2.2□□□□□ -2.06
SDC25YLL016W RNA15P25299 296 aaPredicted RBP2.2□□□□□ -2.06
SDC25YLL016W KAR9P32526 644 aa2.2□□□□□ -2.06
SDC25YLL016W ECM8P38246 354 aa2.2□□□□□ -2.06
SDC25YLL016W ERG28P40030 148 aa2.2□□□□□ -2.06
SDC25YLL016W DDI1P40087 428 aa2.2□□□□□ -2.06
SDC25YLL016W YRB1P41920 201 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W GWT1P47026 490 aa2.2□□□□□ -2.06
SDC25YLL016W NBP1P52919 319 aaPredicted RBP2.2□□□□□ -2.06
SDC25YLL016W GND2P53319 492 aa2.2□□□□□ -2.06
SDC25YLL016W ERG13P54839 491 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W THI20Q08224 551 aa2.2□□□□□ -2.06
SDC25YLL016W YPL199CQ08954 240 aa2.2□□□□□ -2.06
SDC25YLL016W SRO7Q12038 1033 aa2.2□□□□□ -2.06
SDC25YLL016W LAG2Q92325 660 aa2.2□□□□□ -2.06
SDC25YLL016W ATP6P00854 259 aa2.2□□□□□ -2.06
SDC25YLL016W PAB1P04147 577 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
SDC25YLL016W PTP1P25044 335 aa2.2□□□□□ -2.06
SDC25YLL016W TOA2P32774 122 aa2.2□□□□□ -2.06
SDC25YLL016W LOS1P33418 1100 aaPredicted RBP2.2□□□□□ -2.06
SDC25YLL016W TIR2P33890 251 aa2.2□□□□□ -2.06
SDC25YLL016W YHR035WP38769 630 aa2.2□□□□□ -2.06
SDC25YLL016W SFH5P47008 294 aa2.2□□□□□ -2.06
SDC25YLL016W MRM2P53123 320 aa2.2□□□□□ -2.06
SDC25YLL016W RRN9P53437 365 aa2.2□□□□□ -2.06
SDC25YLL016W GPM2Q12008 311 aa2.2□□□□□ -2.06
SDC25YLL016W VIK1Q12045 647 aa2.2□□□□□ -2.06
SDC25YLL016W BSC1Q12140 328 aa2.2□□□□□ -2.06
SDC25YLL016W PER33Q12144 273 aa2.2□□□□□ -2.06
SDC25YLL016W UTP23Q12339 254 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W TFC7Q12415 435 aa2.2□□□□□ -2.06
SDC25YLL016W FBA1P14540 359 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W ERD1P16151 362 aa2.2□□□□□ -2.06
SDC25YLL016W DCC1P25559 380 aa2.2□□□□□ -2.06
SDC25YLL016W RPS5P26783 225 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W ATP7P30902 174 aa2.2□□□□□ -2.06
SDC25YLL016W SPS19P32573 292 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W RTC3P38804 111 aaPredicted RBP2.2□□□□□ -2.06
SDC25YLL016W RPL10P41805 221 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W YJR012CP47087 207 aa2.2□□□□□ -2.06
SDC25YLL016W SLI1P53304 468 aa2.2□□□□□ -2.06
SDC25YLL016W NUP116Q02630 1113 aa2.2□□□□□ -2.06
SDC25YLL016W LOT6Q07923 191 aa2.2□□□□□ -2.06
SDC25YLL016W SNX3Q08826 162 aaKnown RBP2.2□□□□□ -2.06
SDC25YLL016W YDL009CQ12210 107 aa2.2□□□□□ -2.06
SDC25YLL016W YBL111CQ3E7Y5 667 aa2.2□□□□□ -2.06
SDC25YLL016W RPL31AP0C2H8 113 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W HOT13P36078 116 aa2.19□□□□□ -2.06
SDC25YLL016W VPS51P36116 164 aa2.19□□□□□ -2.06
SDC25YLL016W TRM5P38793 499 aa2.19□□□□□ -2.06
SDC25YLL016W FLO5P38894 1075 aa2.19□□□□□ -2.06
SDC25YLL016W DSN1P40568 576 aa2.19□□□□□ -2.06
SDC25YLL016W WWM1P43582 211 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W GLG2P47011 380 aa2.19□□□□□ -2.06
SDC25YLL016W AVT4P50944 713 aa2.19□□□□□ -2.06
SDC25YLL016W YPT32P51996 222 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W CWC23P52868 283 aaPredicted RBP2.19□□□□□ -2.06
SDC25YLL016W LSG1P53145 640 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W SWC4P53201 476 aa2.19□□□□□ -2.06
SDC25YLL016W RRP17Q04031 235 aaPredicted RBP2.19□□□□□ -2.06
SDC25YLL016W SNX41Q04053 625 aa2.19□□□□□ -2.06
SDC25YLL016W YDR222WQ04925 415 aa2.19□□□□□ -2.06
SDC25YLL016W NDE2Q07500 545 aa2.19□□□□□ -2.06
SDC25YLL016W GCN1P33892 2672 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W ACC1Q00955 2233 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W PGK1P00560 416 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W YAK1P14680 807 aa2.19□□□□□ -2.06
SDC25YLL016W CMK2P22517 447 aa2.19□□□□□ -2.06
SDC25YLL016W NAM9P27929 486 aa2.19□□□□□ -2.06
SDC25YLL016W GLC7P32598 312 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W MRPL6P32904 214 aa2.19□□□□□ -2.06
SDC25YLL016W KDX1P36005 433 aa2.19□□□□□ -2.06
SDC25YLL016W PRS2P38620 318 aaKnown RBP2.19□□□□□ -2.06
SDC25YLL016W YHL026CP38740 315 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms