Protein–RNA interactions for Protein: P52868

CWC23, Pre-mRNA-splicing factor CWC23, yeastyeast

Predicted RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CWC23P52868 NSR1YGR159C 1245 nt17.93■□□□□ 0.46
CWC23P52868 YML009W-BYML009W-B 477 nt17.45■□□□□ 0.38
CWC23P52868 NOP1YDL014W 984 nt16.64■□□□□ 0.25
CWC23P52868 MDJ1YFL016C 1536 nt16.63■□□□□ 0.25
CWC23P52868 YJL027CYJL027C 417 nt15.22■□□□□ 0.03
CWC23P52868 YKL036CYKL036C 393 nt14.75□□□□□ -0.05
CWC23P52868 SRX1YKL086W 384 nt14.58□□□□□ -0.08
CWC23P52868 DBP2YNL112W 1641 nt14.46□□□□□ -0.09
CWC23P52868 Q0297Q0297 156 nt14.4□□□□□ -0.1
CWC23P52868 SSA3YBL075C 1950 nt14.39□□□□□ -0.11
CWC23P52868 YBR190WYBR190W 312 nt14.32□□□□□ -0.12
CWC23P52868 RTC3YHR087W 336 nt13.92□□□□□ -0.18
CWC23P52868 YCR051WYCR051W 669 nt13.75□□□□□ -0.21
CWC23P52868 TRN1tP(UGG)A 72 nt13.63□□□□□ -0.23
CWC23P52868 SUF9tP(UGG)F 72 nt13.63□□□□□ -0.23
CWC23P52868 SUF8tP(UGG)H 72 nt13.63□□□□□ -0.23
CWC23P52868 tP(UGG)LtP(UGG)L 72 nt13.63□□□□□ -0.23
CWC23P52868 SUF7tP(UGG)M 72 nt13.63□□□□□ -0.23
CWC23P52868 tP(UGG)N1tP(UGG)N1 72 nt13.63□□□□□ -0.23
CWC23P52868 tP(UGG)N2tP(UGG)N2 72 nt13.63□□□□□ -0.23
CWC23P52868 tP(UGG)O1tP(UGG)O1 72 nt13.63□□□□□ -0.23
CWC23P52868 SUF11tP(UGG)O2 72 nt13.63□□□□□ -0.23
CWC23P52868 PUT4YOR348C 1884 nt13.57□□□□□ -0.24
CWC23P52868 CCC1YLR220W 969 nt13.42□□□□□ -0.26
CWC23P52868 RVS167YDR388W 1449 nt13.31□□□□□ -0.28
CWC23P52868 SCJ1YMR214W 1134 nt13.25□□□□□ -0.29
CWC23P52868 ARE1YCR048W 1833 nt13.11□□□□□ -0.31
CWC23P52868 SCS3YGL126W 1143 nt13.11□□□□□ -0.31
CWC23P52868 POA1YBR022W 534 nt13.06□□□□□ -0.32
CWC23P52868 YHR049C-AYHR049C-A 297 nt12.94□□□□□ -0.34
CWC23P52868 BSC6YOL137W 1494 nt12.93□□□□□ -0.34
CWC23P52868 SPT5YML010W 3192 nt12.91□□□□□ -0.34
CWC23P52868 RPP1BYDL130W 321 nt12.91□□□□□ -0.34
CWC23P52868 SAH1YER043C 1350 nt12.89□□□□□ -0.35
CWC23P52868 YOL085CYOL085C 342 nt12.82□□□□□ -0.36
CWC23P52868 URN1YPR152C 1398 nt12.81□□□□□ -0.36
CWC23P52868 OPI9YLR338W 858 nt12.8□□□□□ -0.36
CWC23P52868 SSA4YER103W 1929 nt12.76□□□□□ -0.37
CWC23P52868 SHR5YOL110W 714 nt12.75□□□□□ -0.37
CWC23P52868 PKP1YIL042C 1185 nt12.71□□□□□ -0.37
CWC23P52868 tP(UGG)O3tP(UGG)O3 72 nt12.64□□□□□ -0.39
CWC23P52868 DEP1YAL013W 1218 nt12.62□□□□□ -0.39
CWC23P52868 BUD23YCR047C 828 nt12.54□□□□□ -0.4
CWC23P52868 PET122YER153C 765 nt12.44□□□□□ -0.42
CWC23P52868 RPN10YHR200W 807 nt12.42□□□□□ -0.42
CWC23P52868 PUN1YLR414C 792 nt12.38□□□□□ -0.43
CWC23P52868 PTC2YER089C 1395 nt12.36□□□□□ -0.43
CWC23P52868 BDF1YLR399C 2061 nt12.36□□□□□ -0.43
CWC23P52868 YNL208WYNL208W 600 nt12.32□□□□□ -0.44
CWC23P52868 NAB2YGL122C 1578 nt12.28□□□□□ -0.44
CWC23P52868 YDJ1YNL064C 1230 nt12.23□□□□□ -0.45
CWC23P52868 MEP2YNL142W 1500 nt12.21□□□□□ -0.46
CWC23P52868 TAT1YBR069C 1860 nt12.19□□□□□ -0.46
CWC23P52868 YJR018WYJR018W 363 nt12.18□□□□□ -0.46
CWC23P52868 FIS1YIL065C 468 nt12.13□□□□□ -0.47
CWC23P52868 GAR1YHR089C 618 nt12.05□□□□□ -0.48
CWC23P52868 SCR1SCR1 522 nt12.04□□□□□ -0.48
CWC23P52868 DCW1YKL046C 1350 nt12.03□□□□□ -0.48
CWC23P52868 DAL1YIR027C 1383 nt12□□□□□ -0.49
CWC23P52868 RRN5YLR141W 1092 nt11.98□□□□□ -0.49
CWC23P52868 YJR120WYJR120W 351 nt11.97□□□□□ -0.49
CWC23P52868 YPS1YLR120C 1710 nt11.94□□□□□ -0.5
CWC23P52868 PHO4YFR034C 939 nt11.92□□□□□ -0.5
CWC23P52868 FPR4YLR449W 1179 nt11.92□□□□□ -0.5
CWC23P52868 PAC11YDR488C 1602 nt11.89□□□□□ -0.51
CWC23P52868 YBR220CYBR220C 1683 nt11.86□□□□□ -0.51
CWC23P52868 EMI2YDR516C 1503 nt11.82□□□□□ -0.52
CWC23P52868 INM2YDR287W 879 nt11.8□□□□□ -0.52
CWC23P52868 YHR165W-AYHR165W-A 312 nt11.8□□□□□ -0.52
CWC23P52868 YDR095CYDR095C 411 nt11.76□□□□□ -0.53
CWC23P52868 YER088W-BYER088W-B 147 nt11.76□□□□□ -0.53
CWC23P52868 SSA1YAL005C 1929 nt11.72□□□□□ -0.53
CWC23P52868 YMR090WYMR090W 684 nt11.72□□□□□ -0.53
CWC23P52868 RPP2BYDR382W 333 nt11.69□□□□□ -0.54
CWC23P52868 TIR1YER011W 765 nt11.69□□□□□ -0.54
CWC23P52868 YDL221WYDL221W 552 nt11.68□□□□□ -0.54
CWC23P52868 SDH1YKL148C 1923 nt11.67□□□□□ -0.54
CWC23P52868 CAC2YML102W 1407 nt11.62□□□□□ -0.55
CWC23P52868 YBL100CYBL100C 315 nt11.61□□□□□ -0.55
CWC23P52868 PTP1YDL230W 1008 nt11.6□□□□□ -0.55
CWC23P52868 PCH2YBR186W 1695 nt11.57□□□□□ -0.56
CWC23P52868 GUT2YIL155C 1950 nt11.55□□□□□ -0.56
CWC23P52868 NVJ2YPR091C 2313 nt11.53□□□□□ -0.56
CWC23P52868 RSB1YOR049C 1065 nt11.52□□□□□ -0.57
CWC23P52868 ATS1YAL020C 1002 nt11.51□□□□□ -0.57
CWC23P52868 RPP2AYOL039W 321 nt11.51□□□□□ -0.57
CWC23P52868 SCC4YER147C 1875 nt11.49□□□□□ -0.57
CWC23P52868 SRB2YHR041C 633 nt11.48□□□□□ -0.57
CWC23P52868 SEC11YIR022W 504 nt11.48□□□□□ -0.57
CWC23P52868 IRC15YPL017C 1500 nt11.46□□□□□ -0.57
CWC23P52868 FUN26YAL022C 1554 nt11.45□□□□□ -0.58
CWC23P52868 BDH2YAL061W 1254 nt11.4□□□□□ -0.58
CWC23P52868 PIB2YGL023C 1908 nt11.4□□□□□ -0.58
CWC23P52868 ALF1YNL148C 765 nt11.38□□□□□ -0.59
CWC23P52868 GIS3YLR094C 1509 nt11.37□□□□□ -0.59
CWC23P52868 YSC84YHR016C 1407 nt11.32□□□□□ -0.6
CWC23P52868 SIS1YNL007C 1059 nt11.29□□□□□ -0.6
CWC23P52868 YHL050CYHL050C 2094 nt11.25□□□□□ -0.61
CWC23P52868 TRM9YML014W 840 nt11.25□□□□□ -0.61
CWC23P52868 CCT6YDR188W 1641 nt11.24□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms