Protein–RNA interactions for Protein: Q07500

NDE2, External NADH-ubiquinone oxidoreductase 2, mitochondrial, yeastyeast

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NDE2Q07500 NSR1YGR159C 1245 nt16.5■□□□□ 0.23
NDE2Q07500 YML009W-BYML009W-B 477 nt16.38■□□□□ 0.21
NDE2Q07500 NOP1YDL014W 984 nt15.96■□□□□ 0.15
NDE2Q07500 MDJ1YFL016C 1536 nt14.71□□□□□ -0.05
NDE2Q07500 YKL036CYKL036C 393 nt14.62□□□□□ -0.07
NDE2Q07500 Q0297Q0297 156 nt13.95□□□□□ -0.18
NDE2Q07500 SRX1YKL086W 384 nt13.93□□□□□ -0.18
NDE2Q07500 SSA3YBL075C 1950 nt13.75□□□□□ -0.21
NDE2Q07500 YJL027CYJL027C 417 nt13.6□□□□□ -0.23
NDE2Q07500 SCS3YGL126W 1143 nt13.21□□□□□ -0.29
NDE2Q07500 YCR051WYCR051W 669 nt13.12□□□□□ -0.31
NDE2Q07500 DBP2YNL112W 1641 nt13.02□□□□□ -0.33
NDE2Q07500 TRN1tP(UGG)A 72 nt12.71□□□□□ -0.37
NDE2Q07500 SUF9tP(UGG)F 72 nt12.71□□□□□ -0.37
NDE2Q07500 SUF8tP(UGG)H 72 nt12.71□□□□□ -0.37
NDE2Q07500 tP(UGG)LtP(UGG)L 72 nt12.71□□□□□ -0.37
NDE2Q07500 SUF7tP(UGG)M 72 nt12.71□□□□□ -0.37
NDE2Q07500 tP(UGG)N1tP(UGG)N1 72 nt12.71□□□□□ -0.37
NDE2Q07500 tP(UGG)N2tP(UGG)N2 72 nt12.71□□□□□ -0.37
NDE2Q07500 tP(UGG)O1tP(UGG)O1 72 nt12.71□□□□□ -0.37
NDE2Q07500 SUF11tP(UGG)O2 72 nt12.71□□□□□ -0.37
NDE2Q07500 YBR190WYBR190W 312 nt12.67□□□□□ -0.38
NDE2Q07500 YOL085CYOL085C 342 nt12.64□□□□□ -0.39
NDE2Q07500 RPP1BYDL130W 321 nt12.49□□□□□ -0.41
NDE2Q07500 CCC1YLR220W 969 nt12.41□□□□□ -0.42
NDE2Q07500 PKP1YIL042C 1185 nt12.35□□□□□ -0.43
NDE2Q07500 RTC3YHR087W 336 nt12.25□□□□□ -0.45
NDE2Q07500 RVS167YDR388W 1449 nt12.19□□□□□ -0.46
NDE2Q07500 SCJ1YMR214W 1134 nt12.1□□□□□ -0.47
NDE2Q07500 tP(UGG)O3tP(UGG)O3 72 nt11.92□□□□□ -0.5
NDE2Q07500 PET122YER153C 765 nt11.89□□□□□ -0.51
NDE2Q07500 ATS1YAL020C 1002 nt11.83□□□□□ -0.52
NDE2Q07500 NVJ2YPR091C 2313 nt11.81□□□□□ -0.52
NDE2Q07500 SCR1SCR1 522 nt11.8□□□□□ -0.52
NDE2Q07500 PAC11YDR488C 1602 nt11.76□□□□□ -0.53
NDE2Q07500 SHR5YOL110W 714 nt11.76□□□□□ -0.53
NDE2Q07500 FPS1YLL043W 2010 nt11.72□□□□□ -0.53
NDE2Q07500 PUT4YOR348C 1884 nt11.61□□□□□ -0.55
NDE2Q07500 YDJ1YNL064C 1230 nt11.59□□□□□ -0.55
NDE2Q07500 RRN5YLR141W 1092 nt11.54□□□□□ -0.56
NDE2Q07500 SSA1YAL005C 1929 nt11.52□□□□□ -0.57
NDE2Q07500 URN1YPR152C 1398 nt11.47□□□□□ -0.57
NDE2Q07500 SSA4YER103W 1929 nt11.44□□□□□ -0.58
NDE2Q07500 OPI9YLR338W 858 nt11.4□□□□□ -0.58
NDE2Q07500 ARE1YCR048W 1833 nt11.35□□□□□ -0.59
NDE2Q07500 DEP1YAL013W 1218 nt11.34□□□□□ -0.59
NDE2Q07500 YER088W-BYER088W-B 147 nt11.32□□□□□ -0.6
NDE2Q07500 RPN10YHR200W 807 nt11.32□□□□□ -0.6
NDE2Q07500 SAH1YER043C 1350 nt11.28□□□□□ -0.6
NDE2Q07500 RSB1YOR049C 1065 nt11.26□□□□□ -0.61
NDE2Q07500 YNL208WYNL208W 600 nt11.25□□□□□ -0.61
NDE2Q07500 GAR1YHR089C 618 nt11.24□□□□□ -0.61
NDE2Q07500 BDF1YLR399C 2061 nt11.23□□□□□ -0.61
NDE2Q07500 SPT5YML010W 3192 nt11.21□□□□□ -0.61
NDE2Q07500 YHR049C-AYHR049C-A 297 nt11.17□□□□□ -0.62
NDE2Q07500 POA1YBR022W 534 nt11.15□□□□□ -0.62
NDE2Q07500 PUN1YLR414C 792 nt11.07□□□□□ -0.64
NDE2Q07500 TAT1YBR069C 1860 nt11.04□□□□□ -0.64
NDE2Q07500 PST2YDR032C 597 nt10.99□□□□□ -0.65
NDE2Q07500 BSC6YOL137W 1494 nt10.99□□□□□ -0.65
NDE2Q07500 YJR018WYJR018W 363 nt10.95□□□□□ -0.66
NDE2Q07500 TIR1YER011W 765 nt10.93□□□□□ -0.66
NDE2Q07500 PTC2YER089C 1395 nt10.89□□□□□ -0.67
NDE2Q07500 UME6YDR207C 2511 nt10.87□□□□□ -0.67
NDE2Q07500 BUD23YCR047C 828 nt10.83□□□□□ -0.68
NDE2Q07500 NAB2YGL122C 1578 nt10.82□□□□□ -0.68
NDE2Q07500 YJR120WYJR120W 351 nt10.79□□□□□ -0.68
NDE2Q07500 YJL225CYJL225C 5277 nt10.7□□□□□ -0.7
NDE2Q07500 RPP2BYDR382W 333 nt10.69□□□□□ -0.7
NDE2Q07500 Q0182Q0182 405 nt10.69□□□□□ -0.7
NDE2Q07500 FIS1YIL065C 468 nt10.69□□□□□ -0.7
NDE2Q07500 DAL1YIR027C 1383 nt10.65□□□□□ -0.7
NDE2Q07500 INM2YDR287W 879 nt10.61□□□□□ -0.71
NDE2Q07500 SRB2YHR041C 633 nt10.58□□□□□ -0.72
NDE2Q07500 PHO4YFR034C 939 nt10.54□□□□□ -0.72
NDE2Q07500 SHU1YHL006C 453 nt10.5□□□□□ -0.73
NDE2Q07500 YKL097CYKL097C 411 nt10.49□□□□□ -0.73
NDE2Q07500 BDH2YAL061W 1254 nt10.48□□□□□ -0.73
NDE2Q07500 FPR4YLR449W 1179 nt10.48□□□□□ -0.73
NDE2Q07500 RDN37-1RDN37-1 5354 nt10.47□□□□□ -0.73
NDE2Q07500 RDN37-2RDN37-2 5354 nt10.47□□□□□ -0.73
NDE2Q07500 YBL100CYBL100C 315 nt10.46□□□□□ -0.73
NDE2Q07500 YPS1YLR120C 1710 nt10.41□□□□□ -0.74
NDE2Q07500 WWM1YFL010C 636 nt10.38□□□□□ -0.75
NDE2Q07500 YGR021WYGR021W 873 nt10.37□□□□□ -0.75
NDE2Q07500 MEP2YNL142W 1500 nt10.37□□□□□ -0.75
NDE2Q07500 YDR095CYDR095C 411 nt10.35□□□□□ -0.75
NDE2Q07500 LSM3YLR438C-A 270 nt10.34□□□□□ -0.75
NDE2Q07500 FUN26YAL022C 1554 nt10.32□□□□□ -0.76
NDE2Q07500 YFL021C-AYFL021C-A 855 nt10.3□□□□□ -0.76
NDE2Q07500 HOM6YJR139C 1080 nt10.3□□□□□ -0.76
NDE2Q07500 YAL037C-BYAL037C-B 975 nt10.3□□□□□ -0.76
NDE2Q07500 TRM9YML014W 840 nt10.26□□□□□ -0.77
NDE2Q07500 YHR165W-AYHR165W-A 312 nt10.24□□□□□ -0.77
NDE2Q07500 CCT6YDR188W 1641 nt10.24□□□□□ -0.77
NDE2Q07500 GUT2YIL155C 1950 nt10.24□□□□□ -0.77
NDE2Q07500 MCH5YOR306C 1566 nt10.18□□□□□ -0.78
NDE2Q07500 ALF1YNL148C 765 nt10.18□□□□□ -0.78
NDE2Q07500 BOR1YNL275W 1731 nt10.17□□□□□ -0.78
NDE2Q07500 MNP1YGL068W 585 nt10.15□□□□□ -0.78
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms