RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W RIF2Q06208 395 aa1.83□□□□□ -2.12
MSL1YIR009W YLR173WQ06247 608 aa1.83□□□□□ -2.12
MSL1YIR009W BCP1Q06338 283 aa1.83□□□□□ -2.12
MSL1YIR009W CTS2Q06350 511 aa1.83□□□□□ -2.12
MSL1YIR009W ASR1Q06834 288 aa1.83□□□□□ -2.12
MSL1YIR009W APC9Q12107 265 aa1.83□□□□□ -2.12
MSL1YIR009W YDL199CQ12407 687 aa1.83□□□□□ -2.12
MSL1YIR009W TY1B-NL2Q99337 1749 aaKnown RBP1.83□□□□□ -2.12
MSL1YIR009W SPP41P38904 1435 aa1.83□□□□□ -2.12
MSL1YIR009W SMC4Q12267 1418 aa1.83□□□□□ -2.12
MSL1YIR009W BCK1Q01389 1478 aa1.82□□□□□ -2.12
MSL1YIR009W ARO1P08566 1588 aaKnown RBP1.82□□□□□ -2.12
MSL1YIR009W HEM4P06174 275 aa1.82□□□□□ -2.12
MSL1YIR009W RPS18AP0CX55 146 aaKnown RBP1.82□□□□□ -2.12
MSL1YIR009W RPS18BP0CX56 146 aaPredicted RBP1.82□□□□□ -2.12
MSL1YIR009W MSI1P13712 422 aa1.82□□□□□ -2.12
MSL1YIR009W MSS116P15424 664 aaKnown RBP1.82□□□□□ -2.12
MSL1YIR009W DAL2P25335 343 aa1.82□□□□□ -2.12
MSL1YIR009W DCC1P25559 380 aa1.82□□□□□ -2.12
MSL1YIR009W PRR1P28708 518 aa1.82□□□□□ -2.12
MSL1YIR009W ACB1P31787 87 aa1.82□□□□□ -2.12
MSL1YIR009W HSM3P38348 480 aa1.82□□□□□ -2.12
MSL1YIR009W CTM1P38818 585 aa1.82□□□□□ -2.12
MSL1YIR009W HEM14P40012 539 aa1.82□□□□□ -2.12
MSL1YIR009W AGP3P43548 558 aa1.82□□□□□ -2.12
MSL1YIR009W YFR057WP43625 151 aa1.82□□□□□ -2.12
MSL1YIR009W CIN2P46670 268 aa1.82□□□□□ -2.12
MSL1YIR009W MRX5P47007 382 aa1.82□□□□□ -2.12
MSL1YIR009W BIR1P47134 954 aa1.82□□□□□ -2.12
MSL1YIR009W OKP1P53298 406 aa1.82□□□□□ -2.12
MSL1YIR009W CRH1P53301 507 aa1.82□□□□□ -2.12
MSL1YIR009W CWC22P53333 577 aaKnown RBP1.82□□□□□ -2.12
MSL1YIR009W MKC7P53379 596 aa1.82□□□□□ -2.12
MSL1YIR009W BIO4P53630 237 aa1.82□□□□□ -2.12
MSL1YIR009W TRM82Q03774 444 aa1.82□□□□□ -2.12
MSL1YIR009W GRX3Q03835 250 aa1.82□□□□□ -2.12
MSL1YIR009W UBX2Q04228 584 aa1.82□□□□□ -2.12
MSL1YIR009W GAS2Q06135 555 aa1.82□□□□□ -2.12
MSL1YIR009W GPN3Q06543 272 aa1.82□□□□□ -2.12
MSL1YIR009W BER1Q06688 274 aaKnown RBP1.82□□□□□ -2.12
MSL1YIR009W CMS1Q07897 291 aaKnown RBP1.82□□□□□ -2.12
MSL1YIR009W FDH1Q08911 376 aa1.82□□□□□ -2.12
MSL1YIR009W HMS1Q12398 434 aa1.82□□□□□ -2.12
MSL1YIR009W POL1P13382 1468 aa1.82□□□□□ -2.12
MSL1YIR009W TY3B-GQ99315 1547 aa1.81□□□□□ -2.12
MSL1YIR009W CHC1P22137 1653 aaKnown RBP1.81□□□□□ -2.12
MSL1YIR009W YRF1-1P0CX20 1796 aa1.81□□□□□ -2.12
MSL1YIR009W YRF1-5P0CX21 1796 aa1.81□□□□□ -2.12
MSL1YIR009W YRF1-8P0CX22 1796 aa1.81□□□□□ -2.12
MSL1YIR009W ILV1P00927 576 aaKnown RBP1.81□□□□□ -2.12
MSL1YIR009W CUP1-1P0CX80 61 aa1.81□□□□□ -2.12
MSL1YIR009W CUP1-2P0CX81 61 aa1.81□□□□□ -2.12
MSL1YIR009W FRS2P15625 503 aaKnown RBP1.81□□□□□ -2.12
MSL1YIR009W CHA1P25379 360 aaKnown RBP1.81□□□□□ -2.12
MSL1YIR009W RPL16BP26785 198 aaKnown RBP1.81□□□□□ -2.12
MSL1YIR009W INO2P26798 304 aa1.81□□□□□ -2.12
MSL1YIR009W CWP1P28319 239 aa1.81□□□□□ -2.12
MSL1YIR009W PMT2P31382 759 aa1.81□□□□□ -2.12
MSL1YIR009W COS9P36034 407 aa1.81□□□□□ -2.12
MSL1YIR009W YKL071WP36086 256 aa1.81□□□□□ -2.12
MSL1YIR009W MRPL10P36520 322 aa1.81□□□□□ -2.12
MSL1YIR009W YPC1P38298 316 aa1.81□□□□□ -2.12
MSL1YIR009W PFS1P38872 237 aa1.81□□□□□ -2.12
MSL1YIR009W YIA6P40556 373 aa1.81□□□□□ -2.12
MSL1YIR009W BIO3P50277 480 aa1.81□□□□□ -2.12
MSL1YIR009W MST27P53176 234 aa1.81□□□□□ -2.12
MSL1YIR009W RNY1Q02933 434 aaKnown RBP1.81□□□□□ -2.12
MSL1YIR009W YMR209CQ03648 457 aa1.81□□□□□ -2.12
MSL1YIR009W SNX41Q04053 625 aa1.81□□□□□ -2.12
MSL1YIR009W FSH2Q05015 223 aa1.81□□□□□ -2.12
MSL1YIR009W YHC1Q05900 231 aaKnown RBP1.81□□□□□ -2.12
MSL1YIR009W MFG1Q07684 458 aa1.81□□□□□ -2.12
MSL1YIR009W FRE8Q12209 686 aa1.81□□□□□ -2.12
MSL1YIR009W UTP23Q12339 254 aaKnown RBP1.81□□□□□ -2.12
MSL1YIR009W MED4Q12343 284 aa1.81□□□□□ -2.12
MSL1YIR009W RPN6Q12377 434 aa1.81□□□□□ -2.12
MSL1YIR009W TFC7Q12415 435 aa1.81□□□□□ -2.12
MSL1YIR009W IZH2Q12442 317 aa1.81□□□□□ -2.12
MSL1YIR009W IZH4Q99393 312 aa1.81□□□□□ -2.12
MSL1YIR009W MHP1P43638 1398 aa1.81□□□□□ -2.12
MSL1YIR009W MMS22Q06164 1454 aa1.81□□□□□ -2.12
MSL1YIR009W SPO14P36126 1683 aa1.8□□□□□ -2.12
MSL1YIR009W SAL1D6W196 494 aa1.8□□□□□ -2.12
MSL1YIR009W REP1P03871 373 aa1.8□□□□□ -2.12
MSL1YIR009W MRP1P10662 321 aaKnown RBP1.8□□□□□ -2.12
MSL1YIR009W CTA1P15202 515 aa1.8□□□□□ -2.12
MSL1YIR009W POL30P15873 258 aaKnown RBP1.8□□□□□ -2.12
MSL1YIR009W FUN26P31381 517 aa1.8□□□□□ -2.12
MSL1YIR009W MSN4P33749 630 aa1.8□□□□□ -2.12
MSL1YIR009W KTI12P34253 313 aaKnown RBP1.8□□□□□ -2.12
MSL1YIR009W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
MSL1YIR009W YKL063CP35725 167 aa1.8□□□□□ -2.12
MSL1YIR009W RCK2P38623 610 aa1.8□□□□□ -2.12
MSL1YIR009W TCD1P38756 429 aa1.8□□□□□ -2.12
MSL1YIR009W YHR035WP38769 630 aa1.8□□□□□ -2.12
MSL1YIR009W OXA1P39952 402 aa1.8□□□□□ -2.12
MSL1YIR009W YFL040WP43562 540 aa1.8□□□□□ -2.12
MSL1YIR009W MOB2P43563 287 aa1.8□□□□□ -2.12
MSL1YIR009W AIM23P47015 356 aa1.8□□□□□ -2.12
MSL1YIR009W CPD1P53314 239 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms