Protein–RNA interactions for Protein: P38348

HSM3, DNA mismatch repair protein HSM3, yeastyeast

Predictions only

Length 480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HSM3P38348 NSR1YGR159C 1245 nt20.21■□□□□ 0.83
HSM3P38348 YML009W-BYML009W-B 477 nt19.94■□□□□ 0.78
HSM3P38348 NOP1YDL014W 984 nt19.13■□□□□ 0.65
HSM3P38348 MDJ1YFL016C 1536 nt18.47■□□□□ 0.55
HSM3P38348 YKL036CYKL036C 393 nt17.24■□□□□ 0.35
HSM3P38348 YJL027CYJL027C 417 nt16.97■□□□□ 0.31
HSM3P38348 SRX1YKL086W 384 nt16.74■□□□□ 0.27
HSM3P38348 Q0297Q0297 156 nt16.63■□□□□ 0.25
HSM3P38348 DBP2YNL112W 1641 nt16.12■□□□□ 0.17
HSM3P38348 YCR051WYCR051W 669 nt15.85■□□□□ 0.13
HSM3P38348 YBR190WYBR190W 312 nt15.84■□□□□ 0.13
HSM3P38348 RTC3YHR087W 336 nt15.5■□□□□ 0.07
HSM3P38348 SCS3YGL126W 1143 nt15.47■□□□□ 0.07
HSM3P38348 TRN1tP(UGG)A 72 nt15.42■□□□□ 0.06
HSM3P38348 SUF9tP(UGG)F 72 nt15.42■□□□□ 0.06
HSM3P38348 SUF8tP(UGG)H 72 nt15.42■□□□□ 0.06
HSM3P38348 tP(UGG)LtP(UGG)L 72 nt15.42■□□□□ 0.06
HSM3P38348 SUF7tP(UGG)M 72 nt15.42■□□□□ 0.06
HSM3P38348 tP(UGG)N1tP(UGG)N1 72 nt15.42■□□□□ 0.06
HSM3P38348 tP(UGG)N2tP(UGG)N2 72 nt15.42■□□□□ 0.06
HSM3P38348 tP(UGG)O1tP(UGG)O1 72 nt15.42■□□□□ 0.06
HSM3P38348 SUF11tP(UGG)O2 72 nt15.42■□□□□ 0.06
HSM3P38348 CCC1YLR220W 969 nt15.31■□□□□ 0.04
HSM3P38348 SSA3YBL075C 1950 nt15.14■□□□□ 0.01
HSM3P38348 RVS167YDR388W 1449 nt15.02■□□□□ -0
HSM3P38348 YOL085CYOL085C 342 nt14.97□□□□□ -0.01
HSM3P38348 RPP1BYDL130W 321 nt14.91□□□□□ -0.02
HSM3P38348 SCJ1YMR214W 1134 nt14.86□□□□□ -0.03
HSM3P38348 PKP1YIL042C 1185 nt14.79□□□□□ -0.04
HSM3P38348 PUT4YOR348C 1884 nt14.79□□□□□ -0.04
HSM3P38348 tP(UGG)O3tP(UGG)O3 72 nt14.43□□□□□ -0.1
HSM3P38348 SHR5YOL110W 714 nt14.38□□□□□ -0.11
HSM3P38348 ARE1YCR048W 1833 nt14.38□□□□□ -0.11
HSM3P38348 PET122YER153C 765 nt14.31□□□□□ -0.12
HSM3P38348 URN1YPR152C 1398 nt14.31□□□□□ -0.12
HSM3P38348 POA1YBR022W 534 nt14.3□□□□□ -0.12
HSM3P38348 SAH1YER043C 1350 nt14.26□□□□□ -0.13
HSM3P38348 YHR049C-AYHR049C-A 297 nt14.2□□□□□ -0.14
HSM3P38348 DEP1YAL013W 1218 nt14.19□□□□□ -0.14
HSM3P38348 OPI9YLR338W 858 nt14.19□□□□□ -0.14
HSM3P38348 BSC6YOL137W 1494 nt14.08□□□□□ -0.16
HSM3P38348 SCR1SCR1 522 nt13.99□□□□□ -0.17
HSM3P38348 RPN10YHR200W 807 nt13.96□□□□□ -0.17
HSM3P38348 YDJ1YNL064C 1230 nt13.95□□□□□ -0.18
HSM3P38348 YNL208WYNL208W 600 nt13.86□□□□□ -0.19
HSM3P38348 BUD23YCR047C 828 nt13.85□□□□□ -0.19
HSM3P38348 RRN5YLR141W 1092 nt13.85□□□□□ -0.19
HSM3P38348 SPT5YML010W 3192 nt13.79□□□□□ -0.2
HSM3P38348 PUN1YLR414C 792 nt13.77□□□□□ -0.21
HSM3P38348 GAR1YHR089C 618 nt13.75□□□□□ -0.21
HSM3P38348 PTC2YER089C 1395 nt13.72□□□□□ -0.21
HSM3P38348 ATS1YAL020C 1002 nt13.71□□□□□ -0.21
HSM3P38348 YJR018WYJR018W 363 nt13.62□□□□□ -0.23
HSM3P38348 NAB2YGL122C 1578 nt13.58□□□□□ -0.23
HSM3P38348 YER088W-BYER088W-B 147 nt13.57□□□□□ -0.24
HSM3P38348 SSA4YER103W 1929 nt13.54□□□□□ -0.24
HSM3P38348 RSB1YOR049C 1065 nt13.4□□□□□ -0.26
HSM3P38348 FIS1YIL065C 468 nt13.35□□□□□ -0.27
HSM3P38348 DAL1YIR027C 1383 nt13.32□□□□□ -0.28
HSM3P38348 FPR4YLR449W 1179 nt13.31□□□□□ -0.28
HSM3P38348 TIR1YER011W 765 nt13.3□□□□□ -0.28
HSM3P38348 YJR120WYJR120W 351 nt13.3□□□□□ -0.28
HSM3P38348 SSA1YAL005C 1929 nt13.26□□□□□ -0.29
HSM3P38348 MEP2YNL142W 1500 nt13.26□□□□□ -0.29
HSM3P38348 PHO4YFR034C 939 nt13.2□□□□□ -0.3
HSM3P38348 RPP2BYDR382W 333 nt13.19□□□□□ -0.3
HSM3P38348 INM2YDR287W 879 nt13.17□□□□□ -0.3
HSM3P38348 YPS1YLR120C 1710 nt13.12□□□□□ -0.31
HSM3P38348 BDF1YLR399C 2061 nt13.07□□□□□ -0.32
HSM3P38348 DCW1YKL046C 1350 nt13.07□□□□□ -0.32
HSM3P38348 YHR165W-AYHR165W-A 312 nt13.01□□□□□ -0.33
HSM3P38348 YBL100CYBL100C 315 nt12.99□□□□□ -0.33
HSM3P38348 SRB2YHR041C 633 nt12.97□□□□□ -0.33
HSM3P38348 YDR095CYDR095C 411 nt12.95□□□□□ -0.34
HSM3P38348 PAC11YDR488C 1602 nt12.88□□□□□ -0.35
HSM3P38348 TAT1YBR069C 1860 nt12.88□□□□□ -0.35
HSM3P38348 EMI2YDR516C 1503 nt12.87□□□□□ -0.35
HSM3P38348 BDH2YAL061W 1254 nt12.84□□□□□ -0.35
HSM3P38348 FUN26YAL022C 1554 nt12.82□□□□□ -0.36
HSM3P38348 YMR090WYMR090W 684 nt12.8□□□□□ -0.36
HSM3P38348 PST2YDR032C 597 nt12.79□□□□□ -0.36
HSM3P38348 YBR220CYBR220C 1683 nt12.79□□□□□ -0.36
HSM3P38348 ALF1YNL148C 765 nt12.75□□□□□ -0.37
HSM3P38348 CAC2YML102W 1407 nt12.72□□□□□ -0.37
HSM3P38348 YDL221WYDL221W 552 nt12.72□□□□□ -0.37
HSM3P38348 PTP1YDL230W 1008 nt12.71□□□□□ -0.37
HSM3P38348 RPP2AYOL039W 321 nt12.71□□□□□ -0.37
HSM3P38348 TRM9YML014W 840 nt12.7□□□□□ -0.38
HSM3P38348 NVJ2YPR091C 2313 nt12.67□□□□□ -0.38
HSM3P38348 SDH1YKL148C 1923 nt12.67□□□□□ -0.38
HSM3P38348 WWM1YFL010C 636 nt12.65□□□□□ -0.38
HSM3P38348 CCT6YDR188W 1641 nt12.58□□□□□ -0.4
HSM3P38348 LSM3YLR438C-A 270 nt12.56□□□□□ -0.4
HSM3P38348 SIS1YNL007C 1059 nt12.55□□□□□ -0.4
HSM3P38348 SCC4YER147C 1875 nt12.53□□□□□ -0.4
HSM3P38348 IRC15YPL017C 1500 nt12.52□□□□□ -0.41
HSM3P38348 SUF2tP(AGG)C 72 nt12.51□□□□□ -0.41
HSM3P38348 SUF10tP(AGG)N 72 nt12.51□□□□□ -0.41
HSM3P38348 GIS3YLR094C 1509 nt12.45□□□□□ -0.42
HSM3P38348 ART5YGR068C 1761 nt12.43□□□□□ -0.42
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms