RNA–Protein interactions for RNA: YNL086W

SNN1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene SNN1, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNN1YNL086W PSE1P32337 1089 aaKnown RBP8.59□□□□□ -1.03
SNN1YNL086W BRL1P38770 471 aa8.59□□□□□ -1.03
SNN1YNL086W ALD2P47771 506 aa8.59□□□□□ -1.03
SNN1YNL086W TFB3Q03290 321 aa8.59□□□□□ -1.03
SNN1YNL086W PRP5P21372 849 aaPredicted RBP8.58□□□□□ -1.04
SNN1YNL086W NPR2P39923 615 aa8.58□□□□□ -1.04
SNN1YNL086W GTT3P39996 337 aa8.58□□□□□ -1.04
SNN1YNL086W YGR273CP53329 174 aa8.58□□□□□ -1.04
SNN1YNL086W RAD54P32863 898 aa8.57□□□□□ -1.04
SNN1YNL086W SAM3Q08986 587 aa8.57□□□□□ -1.04
SNN1YNL086W PSK1P31374 1356 aa8.57□□□□□ -1.04
SNN1YNL086W RAV1P47104 1357 aa8.57□□□□□ -1.04
SNN1YNL086W PAF1P38351 445 aa8.56□□□□□ -1.04
SNN1YNL086W FOX2Q02207 900 aaKnown RBP8.55□□□□□ -1.04
SNN1YNL086W MSB3P48566 633 aaPredicted RBP8.54□□□□□ -1.04
SNN1YNL086W GYP5Q12344 894 aa8.54□□□□□ -1.04
SNN1YNL086W SSM4P40318 1319 aa8.54□□□□□ -1.04
SNN1YNL086W EDE1P34216 1381 aa8.53□□□□□ -1.04
SNN1YNL086W KEX1P09620 729 aa8.53□□□□□ -1.04
SNN1YNL086W CPS1P27614 576 aa8.53□□□□□ -1.04
SNN1YNL086W CSN12P47130 423 aa8.53□□□□□ -1.04
SNN1YNL086W RCM1P53972 490 aa8.53□□□□□ -1.04
SNN1YNL086W PCS60P38137 543 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
SNN1YNL086W IKI3Q06706 1349 aaKnown RBP8.52□□□□□ -1.05
SNN1YNL086W PRP40P33203 583 aaKnown RBP8.51□□□□□ -1.05
SNN1YNL086W CTH1P47976 325 aa8.51□□□□□ -1.05
SNN1YNL086W ROM2P51862 1356 aaKnown RBP8.5□□□□□ -1.05
SNN1YNL086W NAP1P25293 417 aaKnown RBP8.5□□□□□ -1.05
SNN1YNL086W LAM6Q08001 693 aa8.5□□□□□ -1.05
SNN1YNL086W URB1P34241 1764 aaKnown RBP8.5□□□□□ -1.05
SNN1YNL086W SOL3P38858 249 aa8.48□□□□□ -1.05
SNN1YNL086W TEA1P47988 759 aa8.48□□□□□ -1.05
SNN1YNL086W RTC1Q08281 1341 aa8.48□□□□□ -1.05
SNN1YNL086W TCB1Q12466 1186 aa8.47□□□□□ -1.05
SNN1YNL086W PKC1P24583 1151 aa8.46□□□□□ -1.06
SNN1YNL086W PPH3P32345 308 aa8.46□□□□□ -1.06
SNN1YNL086W ORC6P38826 435 aa8.46□□□□□ -1.06
SNN1YNL086W TAF8Q03750 510 aa8.46□□□□□ -1.06
SNN1YNL086W RSF2P46974 1380 aa8.45□□□□□ -1.06
SNN1YNL086W COBP00163 385 aa8.44□□□□□ -1.06
SNN1YNL086W DCW1P36091 449 aa8.44□□□□□ -1.06
SNN1YNL086W TY4B-HP0C2J7 1802 aa8.44□□□□□ -1.06
SNN1YNL086W TY4B-JP47024 1803 aa8.44□□□□□ -1.06
SNN1YNL086W MST1P07236 462 aa8.43□□□□□ -1.06
SNN1YNL086W CLB5P30283 435 aa8.43□□□□□ -1.06
SNN1YNL086W YEF3P16521 1044 aaKnown RBP8.42□□□□□ -1.06
SNN1YNL086W YKL133CP36066 463 aa8.42□□□□□ -1.06
SNN1YNL086W YJL007CP47080 104 aa8.42□□□□□ -1.06
SNN1YNL086W ENP1P38333 483 aaKnown RBP8.41□□□□□ -1.06
SNN1YNL086W BIM1P40013 344 aa8.41□□□□□ -1.06
SNN1YNL086W FKS3Q04952 1785 aa8.4□□□□□ -1.06
SNN1YNL086W YRF1-4O13559 1382 aa8.4□□□□□ -1.06
SNN1YNL086W HTA1P04911 132 aaKnown RBP8.4□□□□□ -1.06
SNN1YNL086W HTA2P04912 132 aa8.4□□□□□ -1.06
SNN1YNL086W YKR075CP36155 307 aa8.4□□□□□ -1.06
SNN1YNL086W AI4P03878 556 aa8.39□□□□□ -1.07
SNN1YNL086W RGR1P19263 1082 aa8.39□□□□□ -1.07
SNN1YNL086W NST1P53935 1240 aa8.39□□□□□ -1.07
SNN1YNL086W YOL036WQ08206 761 aa8.39□□□□□ -1.07
SNN1YNL086W ADE6P38972 1358 aaKnown RBP8.38□□□□□ -1.07
SNN1YNL086W MPH3P0CE00 602 aa8.38□□□□□ -1.07
SNN1YNL086W RPP1BP10622 106 aaKnown RBP8.38□□□□□ -1.07
SNN1YNL086W RPL34BP40525 121 aaKnown RBP8.38□□□□□ -1.07
SNN1YNL086W SLM3Q12093 417 aa8.38□□□□□ -1.07
SNN1YNL086W KTR1P27810 393 aaKnown RBP8.37□□□□□ -1.07
SNN1YNL086W NOP7P53261 605 aaKnown RBP8.37□□□□□ -1.07
SNN1YNL086W ATG32P40458 529 aa8.36□□□□□ -1.07
SNN1YNL086W MVP1P40959 511 aaKnown RBP8.36□□□□□ -1.07
SNN1YNL086W SET4P42948 560 aa8.36□□□□□ -1.07
SNN1YNL086W EAF6P47128 113 aa8.36□□□□□ -1.07
SNN1YNL086W ALD3P54114 506 aa8.36□□□□□ -1.07
SNN1YNL086W SUB2Q07478 446 aaKnown RBP8.36□□□□□ -1.07
SNN1YNL086W YBL036CP38197 257 aa8.35□□□□□ -1.07
SNN1YNL086W TYW1Q08960 810 aaKnown RBP8.35□□□□□ -1.07
SNN1YNL086W GEF1P37020 779 aa8.34□□□□□ -1.07
SNN1YNL086W XKS1P42826 600 aa8.34□□□□□ -1.07
SNN1YNL086W CSC1Q06538 782 aa8.34□□□□□ -1.07
SNN1YNL086W SPT7P35177 1332 aa8.33□□□□□ -1.08
SNN1YNL086W CSE4P36012 229 aa8.33□□□□□ -1.08
SNN1YNL086W MSB4Q12317 492 aa8.33□□□□□ -1.08
SNN1YNL086W SSA4P22202 642 aaKnown RBP8.32□□□□□ -1.08
SNN1YNL086W ILV3P39522 585 aaKnown RBP8.32□□□□□ -1.08
SNN1YNL086W HST2P53686 357 aa8.32□□□□□ -1.08
SNN1YNL086W ESL2P36168 1195 aa8.31□□□□□ -1.08
SNN1YNL086W FPK1P53739 893 aa8.31□□□□□ -1.08
SNN1YNL086W NIS1P53939 407 aa8.31□□□□□ -1.08
SNN1YNL086W RPS24AP0CX31 135 aaKnown RBP8.3□□□□□ -1.08
SNN1YNL086W RPS24BP0CX32 135 aaKnown RBP8.3□□□□□ -1.08
SNN1YNL086W TIF1P10081 395 aaKnown RBP8.3□□□□□ -1.08
SNN1YNL086W GAP1P19145 602 aaPredicted RBP8.3□□□□□ -1.08
SNN1YNL086W SQS1P53866 767 aaKnown RBP8.3□□□□□ -1.08
SNN1YNL086W FRK1Q03002 865 aaPredicted RBP8.3□□□□□ -1.08
SNN1YNL086W SLI15P38283 698 aa8.29□□□□□ -1.08
SNN1YNL086W YML020WQ03722 664 aa8.29□□□□□ -1.08
SNN1YNL086W YPR109WQ06104 294 aa8.29□□□□□ -1.08
SNN1YNL086W MMP1Q12372 583 aa8.29□□□□□ -1.08
SNN1YNL086W YEL023CP39992 682 aa8.28□□□□□ -1.08
SNN1YNL086W SLX8P40072 274 aa8.28□□□□□ -1.08
SNN1YNL086W SAP155P43612 1002 aa8.28□□□□□ -1.08
SNN1YNL086W DAN4P47179 1161 aa8.28□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms