Protein–RNA interactions for Protein: P53866

SQS1, Protein SQS1, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SQS1P53866 YML009W-BYML009W-B 477 nt24.82■■□□□ 1.56
SQS1P53866 NOP1YDL014W 984 nt24.49■■□□□ 1.51
SQS1P53866 NSR1YGR159C 1245 nt23.98■■□□□ 1.43
SQS1P53866 YKL036CYKL036C 393 nt23.39■■□□□ 1.33
SQS1P53866 YJL027CYJL027C 417 nt21.97■■□□□ 1.11
SQS1P53866 Q0297Q0297 156 nt21.75■■□□□ 1.07
SQS1P53866 SCS3YGL126W 1143 nt21.73■■□□□ 1.07
SQS1P53866 SRX1YKL086W 384 nt21.43■■□□□ 1.02
SQS1P53866 MDJ1YFL016C 1536 nt20.47■□□□□ 0.87
SQS1P53866 SCJ1YMR214W 1134 nt20.35■□□□□ 0.85
SQS1P53866 YCR051WYCR051W 669 nt20.34■□□□□ 0.85
SQS1P53866 YOL085CYOL085C 342 nt20.24■□□□□ 0.83
SQS1P53866 PKP1YIL042C 1185 nt19.79■□□□□ 0.76
SQS1P53866 ATS1YAL020C 1002 nt19.67■□□□□ 0.74
SQS1P53866 RPP1BYDL130W 321 nt19.5■□□□□ 0.71
SQS1P53866 TRN1tP(UGG)A 72 nt18.88■□□□□ 0.61
SQS1P53866 SUF9tP(UGG)F 72 nt18.88■□□□□ 0.61
SQS1P53866 SUF8tP(UGG)H 72 nt18.88■□□□□ 0.61
SQS1P53866 tP(UGG)LtP(UGG)L 72 nt18.88■□□□□ 0.61
SQS1P53866 SUF7tP(UGG)M 72 nt18.88■□□□□ 0.61
SQS1P53866 tP(UGG)N1tP(UGG)N1 72 nt18.88■□□□□ 0.61
SQS1P53866 tP(UGG)N2tP(UGG)N2 72 nt18.88■□□□□ 0.61
SQS1P53866 tP(UGG)O1tP(UGG)O1 72 nt18.88■□□□□ 0.61
SQS1P53866 SUF11tP(UGG)O2 72 nt18.88■□□□□ 0.61
SQS1P53866 CCC1YLR220W 969 nt18.64■□□□□ 0.57
SQS1P53866 SCR1SCR1 522 nt18.54■□□□□ 0.56
SQS1P53866 PET122YER153C 765 nt18.52■□□□□ 0.56
SQS1P53866 DBP2YNL112W 1641 nt18.49■□□□□ 0.55
SQS1P53866 RTC3YHR087W 336 nt18.41■□□□□ 0.54
SQS1P53866 tP(UGG)O3tP(UGG)O3 72 nt18.13■□□□□ 0.49
SQS1P53866 PST2YDR032C 597 nt18.1■□□□□ 0.49
SQS1P53866 RRN5YLR141W 1092 nt18.07■□□□□ 0.48
SQS1P53866 RSB1YOR049C 1065 nt17.92■□□□□ 0.46
SQS1P53866 YKL097CYKL097C 411 nt17.79■□□□□ 0.44
SQS1P53866 YER088W-BYER088W-B 147 nt17.74■□□□□ 0.43
SQS1P53866 YDJ1YNL064C 1230 nt17.56■□□□□ 0.4
SQS1P53866 RVS167YDR388W 1449 nt17.54■□□□□ 0.4
SQS1P53866 YBR190WYBR190W 312 nt17.26■□□□□ 0.35
SQS1P53866 SHR5YOL110W 714 nt17.16■□□□□ 0.34
SQS1P53866 SHU1YHL006C 453 nt17.14■□□□□ 0.33
SQS1P53866 GAR1YHR089C 618 nt16.98■□□□□ 0.31
SQS1P53866 YOR139CYOR139C 393 nt16.96■□□□□ 0.31
SQS1P53866 YAL037C-BYAL037C-B 975 nt16.58■□□□□ 0.24
SQS1P53866 NPL3YDR432W 1245 nt16.57■□□□□ 0.24
SQS1P53866 TIR1YER011W 765 nt16.39■□□□□ 0.21
SQS1P53866 DEP1YAL013W 1218 nt16.33■□□□□ 0.2
SQS1P53866 tM(CAU)CtM(CAU)C 72 nt16.22■□□□□ 0.19
SQS1P53866 IMT4tM(CAU)E 72 nt16.22■□□□□ 0.19
SQS1P53866 IMT3tM(CAU)J3 72 nt16.22■□□□□ 0.19
SQS1P53866 IMT1tM(CAU)O1 72 nt16.22■□□□□ 0.19
SQS1P53866 IMT2tM(CAU)P 72 nt16.22■□□□□ 0.19
SQS1P53866 YNL208WYNL208W 600 nt16.21■□□□□ 0.19
SQS1P53866 RPN10YHR200W 807 nt16.14■□□□□ 0.17
SQS1P53866 URN1YPR152C 1398 nt16.13■□□□□ 0.17
SQS1P53866 YOL037CYOL037C 354 nt16.11■□□□□ 0.17
SQS1P53866 SSA1YAL005C 1929 nt16.03■□□□□ 0.16
SQS1P53866 MNP1YGL068W 585 nt16.01■□□□□ 0.15
SQS1P53866 YGR021WYGR021W 873 nt15.99■□□□□ 0.15
SQS1P53866 HOM6YJR139C 1080 nt15.99■□□□□ 0.15
SQS1P53866 BSC6YOL137W 1494 nt15.96■□□□□ 0.14
SQS1P53866 SRB2YHR041C 633 nt15.94■□□□□ 0.14
SQS1P53866 MOT3YMR070W 1473 nt15.94■□□□□ 0.14
SQS1P53866 WWM1YFL010C 636 nt15.8■□□□□ 0.12
SQS1P53866 PUS2YGL063W 1113 nt15.76■□□□□ 0.11
SQS1P53866 RKM5YLR137W 1104 nt15.75■□□□□ 0.11
SQS1P53866 OPI9YLR338W 858 nt15.75■□□□□ 0.11
SQS1P53866 YLR281CYLR281C 468 nt15.68■□□□□ 0.1
SQS1P53866 MRPL8YJL063C 717 nt15.65■□□□□ 0.1
SQS1P53866 YFL021C-AYFL021C-A 855 nt15.56■□□□□ 0.08
SQS1P53866 WHI5YOR083W 888 nt15.47■□□□□ 0.07
SQS1P53866 YJR018WYJR018W 363 nt15.44■□□□□ 0.06
SQS1P53866 YJR120WYJR120W 351 nt15.44■□□□□ 0.06
SQS1P53866 SAH1YER043C 1350 nt15.41■□□□□ 0.06
SQS1P53866 UBX6YJL048C 1191 nt15.41■□□□□ 0.06
SQS1P53866 SSA3YBL075C 1950 nt15.41■□□□□ 0.06
SQS1P53866 FMP45YDL222C 930 nt15.35■□□□□ 0.05
SQS1P53866 RPP2BYDR382W 333 nt15.35■□□□□ 0.05
SQS1P53866 ADO1YJR105W 1023 nt15.31■□□□□ 0.04
SQS1P53866 YCH1YGR203W 447 nt15.29■□□□□ 0.04
SQS1P53866 PUN1YLR414C 792 nt15.29■□□□□ 0.04
SQS1P53866 YPR011CYPR011C 981 nt15.29■□□□□ 0.04
SQS1P53866 DSK2YMR276W 1122 nt15.24■□□□□ 0.03
SQS1P53866 BDH2YAL061W 1254 nt15.22■□□□□ 0.03
SQS1P53866 LSM3YLR438C-A 270 nt15.2■□□□□ 0.02
SQS1P53866 YEL076C-AYEL076C-A 651 nt15.19■□□□□ 0.02
SQS1P53866 YEL076CYEL076C 651 nt15.19■□□□□ 0.02
SQS1P53866 YLR236CYLR236C 324 nt15.19■□□□□ 0.02
SQS1P53866 YLR464WYLR464W 651 nt15.19■□□□□ 0.02
SQS1P53866 IMP2'YIL154C 1041 nt15.15■□□□□ 0.02
SQS1P53866 PUT4YOR348C 1884 nt15.03■□□□□ -0
SQS1P53866 ARE1YCR048W 1833 nt15.02■□□□□ -0
SQS1P53866 RTG1YOL067C 534 nt15.02■□□□□ -0
SQS1P53866 SIS1YNL007C 1059 nt14.98□□□□□ -0.01
SQS1P53866 YFL015W-AYFL015W-A 318 nt14.94□□□□□ -0.02
SQS1P53866 PTC2YER089C 1395 nt14.94□□□□□ -0.02
SQS1P53866 SPP1YPL138C 1062 nt14.91□□□□□ -0.02
SQS1P53866 YLR154C-GYLR154C-G 150 nt14.88□□□□□ -0.03
SQS1P53866 YDR094WYDR094W 336 nt14.86□□□□□ -0.03
SQS1P53866 LPX1YOR084W 1164 nt14.86□□□□□ -0.03
SQS1P53866 ERV46YAL042W 1248 nt14.84□□□□□ -0.03
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms