RNA–Protein interactions for RNA: YLR450W

HMG2, Transcript of HMG-CoA reductase, yeastyeast

Gene HMG2, Length 3,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HMG2YLR450W NUP170P38181 1502 aa10.24□□□□□ -0.77
HMG2YLR450W PDR15Q04182 1529 aaKnown RBP10.24□□□□□ -0.77
HMG2YLR450W BRN1P38170 754 aa10.24□□□□□ -0.77
HMG2YLR450W TCD1P38756 429 aa10.24□□□□□ -0.77
HMG2YLR450W GGA1Q06336 557 aa10.24□□□□□ -0.77
HMG2YLR450W HOS3Q02959 697 aaKnown RBP10.23□□□□□ -0.77
HMG2YLR450W ORM2Q06144 216 aa10.23□□□□□ -0.77
HMG2YLR450W CFT2Q12102 859 aaPredicted RBP10.23□□□□□ -0.77
HMG2YLR450W TPS3P38426 1054 aaKnown RBP10.23□□□□□ -0.77
HMG2YLR450W ESC2Q06340 456 aa10.23□□□□□ -0.77
HMG2YLR450W PSR1Q07800 427 aa10.22□□□□□ -0.77
HMG2YLR450W YOR389WQ08912 624 aa10.22□□□□□ -0.77
HMG2YLR450W TY4B-PA0A0B7P3V8 1104 aa10.22□□□□□ -0.77
HMG2YLR450W PSO2P30620 661 aa10.22□□□□□ -0.77
HMG2YLR450W RCF1Q03713 159 aa10.22□□□□□ -0.77
HMG2YLR450W IMH1Q06704 911 aaKnown RBP10.22□□□□□ -0.77
HMG2YLR450W VPS27P40343 622 aaKnown RBP10.22□□□□□ -0.77
HMG2YLR450W HOS4P40480 1083 aa10.22□□□□□ -0.77
HMG2YLR450W DMA1P38823 416 aa10.21□□□□□ -0.77
HMG2YLR450W ATG36P46983 293 aa10.21□□□□□ -0.77
HMG2YLR450W PXR1P53335 271 aaPredicted RBP10.21□□□□□ -0.77
HMG2YLR450W IRC20Q06554 1556 aa10.21□□□□□ -0.78
HMG2YLR450W HSC82P15108 705 aaKnown RBP10.21□□□□□ -0.78
HMG2YLR450W RAD3P06839 778 aa10.2□□□□□ -0.78
HMG2YLR450W KAR3P17119 729 aa10.2□□□□□ -0.78
HMG2YLR450W PEX19Q07418 342 aa10.2□□□□□ -0.78
HMG2YLR450W YOL087CQ99247 1116 aa10.2□□□□□ -0.78
HMG2YLR450W GDT1P38301 280 aaPredicted RBP10.2□□□□□ -0.78
HMG2YLR450W MTR4P47047 1073 aaKnown RBP10.2□□□□□ -0.78
HMG2YLR450W TEA1P47988 759 aa10.2□□□□□ -0.78
HMG2YLR450W GCD6P32501 712 aaKnown RBP10.19□□□□□ -0.78
HMG2YLR450W NUF2P33895 451 aa10.19□□□□□ -0.78
HMG2YLR450W CEF1Q03654 590 aaPredicted RBP10.19□□□□□ -0.78
HMG2YLR450W SEC39Q12745 709 aa10.18□□□□□ -0.78
HMG2YLR450W TFG1P41895 735 aaPredicted RBP10.18□□□□□ -0.78
HMG2YLR450W YMR196WQ04336 1088 aa10.18□□□□□ -0.78
HMG2YLR450W TY3B-GQ99315 1547 aa10.18□□□□□ -0.78
HMG2YLR450W ARP5P53946 755 aa10.18□□□□□ -0.78
HMG2YLR450W MCM2P29469 868 aa10.17□□□□□ -0.78
HMG2YLR450W MAK11P20484 414 aaKnown RBP10.17□□□□□ -0.78
HMG2YLR450W DNM1P54861 757 aa10.17□□□□□ -0.78
HMG2YLR450W GLE1Q12315 538 aa10.17□□□□□ -0.78
HMG2YLR450W DPH5P32469 300 aaPredicted RBP10.16□□□□□ -0.78
HMG2YLR450W YKR023WP36119 530 aaKnown RBP10.16□□□□□ -0.78
HMG2YLR450W ARR1Q06596 294 aa10.16□□□□□ -0.78
HMG2YLR450W SFI1Q12369 946 aa10.16□□□□□ -0.78
HMG2YLR450W TRM3Q07527 1436 aa10.16□□□□□ -0.78
HMG2YLR450W CLN1P20437 546 aa10.16□□□□□ -0.78
HMG2YLR450W OLA1P38219 394 aaKnown RBP10.16□□□□□ -0.78
HMG2YLR450W NOP7P53261 605 aaKnown RBP10.16□□□□□ -0.78
HMG2YLR450W LCD1Q04377 747 aa10.15□□□□□ -0.79
HMG2YLR450W SML1Q04964 104 aa10.15□□□□□ -0.79
HMG2YLR450W LSP1Q12230 341 aaKnown RBP10.15□□□□□ -0.79
HMG2YLR450W YRF1-1P0CX20 1796 aa10.15□□□□□ -0.79
HMG2YLR450W YRF1-5P0CX21 1796 aa10.15□□□□□ -0.79
HMG2YLR450W YRF1-8P0CX22 1796 aa10.15□□□□□ -0.79
HMG2YLR450W KEX2P13134 814 aa10.14□□□□□ -0.79
HMG2YLR450W YBT1P32386 1661 aa10.14□□□□□ -0.79
HMG2YLR450W HUL5P53119 910 aa10.13□□□□□ -0.79
HMG2YLR450W YNL035CP53962 389 aaKnown RBP10.13□□□□□ -0.79
HMG2YLR450W RTT107P38850 1070 aa10.13□□□□□ -0.79
HMG2YLR450W BEM4P39011 633 aa10.13□□□□□ -0.79
HMG2YLR450W NDC80P40460 691 aa10.12□□□□□ -0.79
HMG2YLR450W YNL050CP53952 270 aa10.12□□□□□ -0.79
HMG2YLR450W SEC20P28791 383 aa10.12□□□□□ -0.79
HMG2YLR450W IAH1P41734 238 aa10.12□□□□□ -0.79
HMG2YLR450W MRS2Q01926 470 aa10.12□□□□□ -0.79
HMG2YLR450W TOM71P38825 639 aaKnown RBP10.11□□□□□ -0.79
HMG2YLR450W JJJ1P53863 590 aa10.11□□□□□ -0.79
HMG2YLR450W TIM11P81449 96 aaPredicted RBP10.11□□□□□ -0.79
HMG2YLR450W RRB1Q04225 511 aaKnown RBP10.11□□□□□ -0.79
HMG2YLR450W BRF1P29056 596 aa10.11□□□□□ -0.79
HMG2YLR450W BRL1P38770 471 aa10.11□□□□□ -0.79
HMG2YLR450W NAB3P38996 802 aaKnown RBP RIP-Chip data10.11□□□□□ -0.79 RIP-Chip
HMG2YLR450W RRP9Q06506 573 aaKnown RBP10.11□□□□□ -0.79
HMG2YLR450W CLF1Q12309 687 aaPredicted RBP10.11□□□□□ -0.79
HMG2YLR450W RAD9P14737 1309 aa10.11□□□□□ -0.79
HMG2YLR450W RPG1P38249 964 aaKnown RBP10.1□□□□□ -0.79
HMG2YLR450W SEC26P41810 973 aaKnown RBP10.1□□□□□ -0.79
HMG2YLR450W MET5P47169 1442 aa10.1□□□□□ -0.79
HMG2YLR450W GEA2P39993 1459 aaKnown RBP10.1□□□□□ -0.79
HMG2YLR450W RPL5P26321 297 aaKnown RBP10.09□□□□□ -0.79
HMG2YLR450W HOT1Q03213 719 aa10.09□□□□□ -0.79
HMG2YLR450W PKH1Q03407 766 aa10.09□□□□□ -0.79
HMG2YLR450W RIX7Q07844 837 aaKnown RBP10.09□□□□□ -0.79
HMG2YLR450W RVB2Q12464 471 aaKnown RBP10.09□□□□□ -0.79
HMG2YLR450W GEA1P47102 1408 aaPredicted RBP10.09□□□□□ -0.79
HMG2YLR450W PDR12Q02785 1511 aa10.08□□□□□ -0.8
HMG2YLR450W PDI1P17967 522 aaKnown RBP10.08□□□□□ -0.8
HMG2YLR450W NUP145P49687 1317 aa10.07□□□□□ -0.8
HMG2YLR450W VPS41P38959 992 aa10.07□□□□□ -0.8
HMG2YLR450W ARO80Q04052 950 aa10.07□□□□□ -0.8
HMG2YLR450W UTP4Q06679 776 aaKnown RBP10.07□□□□□ -0.8
HMG2YLR450W PDS5Q04264 1277 aa10.07□□□□□ -0.8
HMG2YLR450W NUP159P40477 1460 aa10.07□□□□□ -0.8
HMG2YLR450W UBP1P25037 809 aa10.07□□□□□ -0.8
HMG2YLR450W MPH1P40562 993 aa10.06□□□□□ -0.8
HMG2YLR450W INP52P50942 1183 aa10.06□□□□□ -0.8
HMG2YLR450W VMS1Q04311 632 aaKnown RBP10.06□□□□□ -0.8
HMG2YLR450W YDR341CQ05506 607 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms