RNA–Protein interactions for RNA: YIR001C

SGN1, Transcript of Cytoplasmic RNA-binding protein, yeastyeast

Gene SGN1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGN1YIR001C TRK1P12685 1235 aa5.49□□□□□ -1.53
SGN1YIR001C KRE5P22023 1365 aa5.49□□□□□ -1.53
SGN1YIR001C GCN2P15442 1659 aa5.48□□□□□ -1.53
SGN1YIR001C REF2P42073 533 aaPredicted RBP5.48□□□□□ -1.53
SGN1YIR001C VPS70P47161 811 aa5.48□□□□□ -1.53
SGN1YIR001C YMR074CQ04773 145 aa5.48□□□□□ -1.53
SGN1YIR001C MAK21Q12176 1025 aaKnown RBP5.48□□□□□ -1.53
SGN1YIR001C ENT1Q12518 454 aa5.48□□□□□ -1.53
SGN1YIR001C PDR11P40550 1411 aa5.48□□□□□ -1.53
SGN1YIR001C KEX1P09620 729 aa5.47□□□□□ -1.53
SGN1YIR001C YNR029CP53729 429 aaKnown RBP5.47□□□□□ -1.53
SGN1YIR001C UBP14P38237 781 aaKnown RBP5.46□□□□□ -1.54
SGN1YIR001C ILV3P39522 585 aaKnown RBP5.46□□□□□ -1.54
SGN1YIR001C BCK1Q01389 1478 aa5.45□□□□□ -1.54
SGN1YIR001C CFT1Q06632 1357 aaKnown RBP5.45□□□□□ -1.54
SGN1YIR001C RPP1BP10622 106 aaKnown RBP5.45□□□□□ -1.54
SGN1YIR001C YLR326WQ06170 240 aaKnown RBP5.45□□□□□ -1.54
SGN1YIR001C YRF1-2P40105 1681 aa5.44□□□□□ -1.54
SGN1YIR001C RAD54P32863 898 aa5.44□□□□□ -1.54
SGN1YIR001C KIC1P38692 1080 aa5.44□□□□□ -1.54
SGN1YIR001C VHR2P40041 505 aa5.44□□□□□ -1.54
SGN1YIR001C PEX29Q03370 554 aa5.44□□□□□ -1.54
SGN1YIR001C ENV9Q08651 330 aa5.44□□□□□ -1.54
SGN1YIR001C SLI15P38283 698 aa5.43□□□□□ -1.54
SGN1YIR001C IMH1Q06704 911 aaKnown RBP5.43□□□□□ -1.54
SGN1YIR001C MID1P41821 548 aa5.42□□□□□ -1.54
SGN1YIR001C NUP192P47054 1683 aa5.42□□□□□ -1.54
SGN1YIR001C RRP5Q05022 1729 aaKnown RBP5.42□□□□□ -1.54
SGN1YIR001C CAB1Q04430 367 aa5.41□□□□□ -1.54
SGN1YIR001C YML082WQ04533 649 aaKnown RBP5.41□□□□□ -1.54
SGN1YIR001C COX6P00427 148 aa5.4□□□□□ -1.54
SGN1YIR001C PCS60P38137 543 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
SGN1YIR001C YDR090CQ03193 310 aa5.4□□□□□ -1.54
SGN1YIR001C DPL1Q05567 589 aa5.4□□□□□ -1.54
SGN1YIR001C MPC54Q08550 464 aa5.4□□□□□ -1.54
SGN1YIR001C PAF1P38351 445 aa5.39□□□□□ -1.55
SGN1YIR001C HAP5Q02516 242 aa5.39□□□□□ -1.55
SGN1YIR001C LEU3P08638 886 aa5.38□□□□□ -1.55
SGN1YIR001C ALD4P46367 519 aaKnown RBP5.38□□□□□ -1.55
SGN1YIR001C PBS2P08018 668 aa5.37□□□□□ -1.55
SGN1YIR001C UBP1P25037 809 aa5.37□□□□□ -1.55
SGN1YIR001C PRP45P28004 379 aaPredicted RBP5.37□□□□□ -1.55
SGN1YIR001C TAF5P38129 798 aa5.37□□□□□ -1.55
SGN1YIR001C BNI4P53858 892 aa5.37□□□□□ -1.55
SGN1YIR001C IKI3Q06706 1349 aaKnown RBP5.37□□□□□ -1.55
SGN1YIR001C TY3B-IQ7LHG5 1498 aaKnown RBP5.37□□□□□ -1.55
SGN1YIR001C PTC2P39966 464 aaKnown RBP5.36□□□□□ -1.55
SGN1YIR001C ISU2Q12056 156 aa5.36□□□□□ -1.55
SGN1YIR001C TY4B-HP0C2J7 1802 aa5.36□□□□□ -1.55
SGN1YIR001C TY4B-JP47024 1803 aa5.36□□□□□ -1.55
SGN1YIR001C RAD9P14737 1309 aa5.35□□□□□ -1.55
SGN1YIR001C DSF2P38213 736 aa5.35□□□□□ -1.55
SGN1YIR001C NMA111P53920 997 aa5.35□□□□□ -1.55
SGN1YIR001C NAP1P25293 417 aaKnown RBP5.34□□□□□ -1.55
SGN1YIR001C CSC1Q06538 782 aa5.34□□□□□ -1.55
SGN1YIR001C URB1P34241 1764 aaKnown RBP5.34□□□□□ -1.56
SGN1YIR001C TFB4Q12004 338 aa5.33□□□□□ -1.56
SGN1YIR001C MAM3Q12296 706 aa5.33□□□□□ -1.56
SGN1YIR001C RAV1P47104 1357 aa5.32□□□□□ -1.56
SGN1YIR001C SSM4P40318 1319 aa5.32□□□□□ -1.56
SGN1YIR001C SPB4P25808 606 aaPredicted RBP5.32□□□□□ -1.56
SGN1YIR001C UGA2P38067 497 aa5.32□□□□□ -1.56
SGN1YIR001C CDC73Q06697 393 aa5.32□□□□□ -1.56
SGN1YIR001C AMS1P22855 1083 aa5.31□□□□□ -1.56
SGN1YIR001C YBL086CP38177 466 aa5.31□□□□□ -1.56
SGN1YIR001C ORC6P38826 435 aa5.31□□□□□ -1.56
SGN1YIR001C RPN11P43588 306 aaKnown RBP5.31□□□□□ -1.56
SGN1YIR001C PEX21P50091 288 aa5.31□□□□□ -1.56
SGN1YIR001C FKS3Q04952 1785 aa5.31□□□□□ -1.56
SGN1YIR001C GAP1P19145 602 aaPredicted RBP5.3□□□□□ -1.56
SGN1YIR001C PRP5P21372 849 aaPredicted RBP5.3□□□□□ -1.56
SGN1YIR001C YJL181WP46987 611 aa5.3□□□□□ -1.56
SGN1YIR001C RTC1Q08281 1341 aa5.29□□□□□ -1.56
SGN1YIR001C YRF1-3P0CX14 1859 aa5.29□□□□□ -1.56
SGN1YIR001C YRF1-7P0CX15 1859 aa5.29□□□□□ -1.56
SGN1YIR001C YRF1-6P53819 1859 aa5.29□□□□□ -1.56
SGN1YIR001C CPS1P27614 576 aa5.29□□□□□ -1.56
SGN1YIR001C SSA1P10591 642 aaKnown RBP5.28□□□□□ -1.56
SGN1YIR001C PSE1P32337 1089 aaKnown RBP5.28□□□□□ -1.56
SGN1YIR001C GBP2P25555 427 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
SGN1YIR001C GAR1P28007 205 aaKnown RBP5.27□□□□□ -1.57
SGN1YIR001C DOT5P40553 215 aa5.27□□□□□ -1.57
SGN1YIR001C ALD2P47771 506 aa5.27□□□□□ -1.57
SGN1YIR001C NOP7P53261 605 aaKnown RBP5.27□□□□□ -1.57
SGN1YIR001C RCM1P53972 490 aa5.27□□□□□ -1.57
SGN1YIR001C IES2P40154 320 aa5.26□□□□□ -1.57
SGN1YIR001C TAF8Q03750 510 aa5.26□□□□□ -1.57
SGN1YIR001C CLB5P30283 435 aa5.25□□□□□ -1.57
SGN1YIR001C MVP1P40959 511 aaKnown RBP5.25□□□□□ -1.57
SGN1YIR001C MSB3P48566 633 aaPredicted RBP5.25□□□□□ -1.57
SGN1YIR001C LYS4P49367 693 aaPredicted RBP5.25□□□□□ -1.57
SGN1YIR001C SSA2P10592 639 aaKnown RBP5.24□□□□□ -1.57
SGN1YIR001C ESL2P36168 1195 aa5.24□□□□□ -1.57
SGN1YIR001C LAM6Q08001 693 aa5.24□□□□□ -1.57
SGN1YIR001C TCB1Q12466 1186 aa5.24□□□□□ -1.57
SGN1YIR001C YEF3P16521 1044 aaKnown RBP5.23□□□□□ -1.57
SGN1YIR001C RGR1P19263 1082 aa5.23□□□□□ -1.57
SGN1YIR001C PRP40P33203 583 aaKnown RBP5.23□□□□□ -1.57
SGN1YIR001C ENP1P38333 483 aaKnown RBP5.23□□□□□ -1.57
SGN1YIR001C PSK1P31374 1356 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms