RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W DIT2P21595 489 aa8.2□□□□□ -1.1
VMA16YHR026W NUP42P49686 430 aaKnown RBP8.19□□□□□ -1.1
VMA16YHR026W CDC73Q06697 393 aa8.18□□□□□ -1.1
VMA16YHR026W YDL129WQ07555 291 aa8.18□□□□□ -1.1
VMA16YHR026W BCK1Q01389 1478 aa8.18□□□□□ -1.1
VMA16YHR026W PDR5P33302 1511 aaKnown RBP8.18□□□□□ -1.1
VMA16YHR026W SAP30P38429 201 aa8.17□□□□□ -1.1
VMA16YHR026W PDR11P40550 1411 aa8.17□□□□□ -1.1
VMA16YHR026W PEX29Q03370 554 aa8.16□□□□□ -1.1
VMA16YHR026W YJL171CP46992 396 aa8.14□□□□□ -1.11
VMA16YHR026W MPC54Q08550 464 aa8.14□□□□□ -1.11
VMA16YHR026W ORC6P38826 435 aa8.13□□□□□ -1.11
VMA16YHR026W YDR344CQ05510 147 aa8.13□□□□□ -1.11
VMA16YHR026W ENT1Q12518 454 aa8.13□□□□□ -1.11
VMA16YHR026W GLC3P32775 704 aa8.12□□□□□ -1.11
VMA16YHR026W KRE5P22023 1365 aa8.11□□□□□ -1.11
VMA16YHR026W CFT1Q06632 1357 aaKnown RBP8.11□□□□□ -1.11
VMA16YHR026W RIA1P53893 1110 aa8.11□□□□□ -1.11
VMA16YHR026W MRX12P47084 519 aa8.1□□□□□ -1.11
VMA16YHR026W DPL1Q05567 589 aa8.1□□□□□ -1.11
VMA16YHR026W ENV9Q08651 330 aa8.1□□□□□ -1.11
VMA16YHR026W BMT6Q12291 365 aa8.1□□□□□ -1.11
VMA16YHR026W RPN1P38764 993 aaKnown RBP8.09□□□□□ -1.11
VMA16YHR026W YNR021WP53723 404 aaKnown RBP8.09□□□□□ -1.11
VMA16YHR026W YNR029CP53729 429 aaKnown RBP8.09□□□□□ -1.11
VMA16YHR026W IMH1Q06704 911 aaKnown RBP8.08□□□□□ -1.12
VMA16YHR026W NMA111P53920 997 aa8.07□□□□□ -1.12
VMA16YHR026W RPP1BP10622 106 aaKnown RBP8.06□□□□□ -1.12
VMA16YHR026W LEO1P38439 464 aa8.06□□□□□ -1.12
VMA16YHR026W RGR1P19263 1082 aa8.05□□□□□ -1.12
VMA16YHR026W MVP1P40959 511 aaKnown RBP8.05□□□□□ -1.12
VMA16YHR026W PEX21P50091 288 aa8.05□□□□□ -1.12
VMA16YHR026W GAP1P19145 602 aaPredicted RBP8.04□□□□□ -1.12
VMA16YHR026W PSE1P32337 1089 aaKnown RBP8.04□□□□□ -1.12
VMA16YHR026W ATF2P53296 535 aa8.04□□□□□ -1.12
VMA16YHR026W ELP4Q02884 456 aaKnown RBP8.03□□□□□ -1.12
VMA16YHR026W CSC1Q06538 782 aa8.03□□□□□ -1.12
VMA16YHR026W TUM1Q08686 304 aaKnown RBP8.02□□□□□ -1.13
VMA16YHR026W ISU2Q12056 156 aa8.02□□□□□ -1.13
VMA16YHR026W HAP5Q02516 242 aa8.01□□□□□ -1.13
VMA16YHR026W YPR109WQ06104 294 aa8.01□□□□□ -1.13
VMA16YHR026W ARH1P48360 493 aa8□□□□□ -1.13
VMA16YHR026W YRR1Q12172 810 aa8□□□□□ -1.13
VMA16YHR026W SSA1P10591 642 aaKnown RBP7.99□□□□□ -1.13
VMA16YHR026W KIN1P13185 1064 aa7.98□□□□□ -1.13
VMA16YHR026W UBP1P25037 809 aa7.98□□□□□ -1.13
VMA16YHR026W TFB4Q12004 338 aa7.98□□□□□ -1.13
VMA16YHR026W PDR1P12383 1068 aa7.97□□□□□ -1.13
VMA16YHR026W TEA1P47988 759 aa7.96□□□□□ -1.14
VMA16YHR026W AIM7Q12156 149 aa7.96□□□□□ -1.14
VMA16YHR026W GCN2P15442 1659 aa7.95□□□□□ -1.14
VMA16YHR026W YBL086CP38177 466 aa7.95□□□□□ -1.14
VMA16YHR026W PRE3P38624 215 aa7.95□□□□□ -1.14
VMA16YHR026W YRF1-2P40105 1681 aa7.95□□□□□ -1.14
VMA16YHR026W TY3B-IQ7LHG5 1498 aaKnown RBP7.94□□□□□ -1.14
VMA16YHR026W UGA2P38067 497 aa7.92□□□□□ -1.14
VMA16YHR026W SPT23P35210 1082 aa7.91□□□□□ -1.14
VMA16YHR026W CAB1Q04430 367 aa7.91□□□□□ -1.14
VMA16YHR026W RRP5Q05022 1729 aaKnown RBP7.9□□□□□ -1.14
VMA16YHR026W CHL1P22516 861 aaPredicted RBP7.9□□□□□ -1.14
VMA16YHR026W PRP45P28004 379 aaPredicted RBP7.9□□□□□ -1.14
VMA16YHR026W BNI4P53858 892 aa7.9□□□□□ -1.14
VMA16YHR026W CLB5P30283 435 aa7.89□□□□□ -1.15
VMA16YHR026W PTC2P39966 464 aaKnown RBP7.89□□□□□ -1.15
VMA16YHR026W RRD1P40454 393 aaKnown RBP7.89□□□□□ -1.15
VMA16YHR026W RPN11P43588 306 aaKnown RBP7.89□□□□□ -1.15
VMA16YHR026W NIS1P53939 407 aa7.89□□□□□ -1.15
VMA16YHR026W NUD1P32336 851 aa7.88□□□□□ -1.15
VMA16YHR026W NUP192P47054 1683 aa7.88□□□□□ -1.15
VMA16YHR026W RAD9P14737 1309 aa7.86□□□□□ -1.15
VMA16YHR026W ALD4P46367 519 aaKnown RBP7.86□□□□□ -1.15
VMA16YHR026W RAM1P22007 431 aa7.85□□□□□ -1.15
VMA16YHR026W TAF5P38129 798 aa7.85□□□□□ -1.15
VMA16YHR026W TYW1Q08960 810 aaKnown RBP7.85□□□□□ -1.15
VMA16YHR026W YPR015CQ12531 247 aa7.85□□□□□ -1.15
VMA16YHR026W GUA1P38625 525 aaKnown RBP7.84□□□□□ -1.15
VMA16YHR026W STR2P47164 639 aa7.84□□□□□ -1.15
VMA16YHR026W ALD2P47771 506 aa7.84□□□□□ -1.15
VMA16YHR026W ISM1P48526 1002 aa7.84□□□□□ -1.15
VMA16YHR026W FPK1P53739 893 aa7.84□□□□□ -1.15
VMA16YHR026W SCJ1P25303 377 aa7.83□□□□□ -1.16
VMA16YHR026W DOT5P40553 215 aa7.83□□□□□ -1.16
VMA16YHR026W EDE1P34216 1381 aa7.83□□□□□ -1.16
VMA16YHR026W SSA2P10592 639 aaKnown RBP7.82□□□□□ -1.16
VMA16YHR026W KEX2P13134 814 aa7.82□□□□□ -1.16
VMA16YHR026W NPL4P33755 580 aa7.82□□□□□ -1.16
VMA16YHR026W LYS4P49367 693 aaPredicted RBP7.82□□□□□ -1.16
VMA16YHR026W ERF2Q06551 359 aa7.82□□□□□ -1.16
VMA16YHR026W CSN12P47130 423 aa7.81□□□□□ -1.16
VMA16YHR026W PRP5P21372 849 aaPredicted RBP7.8□□□□□ -1.16
VMA16YHR026W NPR2P39923 615 aa7.8□□□□□ -1.16
VMA16YHR026W YJL181WP46987 611 aa7.8□□□□□ -1.16
VMA16YHR026W YML082WQ04533 649 aaKnown RBP7.8□□□□□ -1.16
VMA16YHR026W RAV1P47104 1357 aa7.8□□□□□ -1.16
VMA16YHR026W IKI3Q06706 1349 aaKnown RBP7.79□□□□□ -1.16
VMA16YHR026W KTR1P27810 393 aaKnown RBP7.79□□□□□ -1.16
VMA16YHR026W GCD11P32481 527 aaKnown RBP7.79□□□□□ -1.16
VMA16YHR026W BUD20Q08004 166 aaPredicted RBP7.79□□□□□ -1.16
VMA16YHR026W SIT4P20604 311 aa7.78□□□□□ -1.16
VMA16YHR026W CPS1P27614 576 aa7.78□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms