RNA–Protein interactions for RNA: YER044C

ERG28, Transcript of Endoplasmic reticulum membrane protein, yeast

Gene ERG28, Length 447 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ERG28	YER044C	RPA14	P50106	137 aa		4.88	□□□□□ -1.63
ERG28	YER044C	YPR097W	Q06839	1073 aa		4.88	□□□□□ -1.63
ERG28	YER044C	SPT6	P23615	1451 aa	Known RBP	4.88	□□□□□ -1.63
ERG28	YER044C	ASH1	P34233	588 aa		4.87	□□□□□ -1.63
ERG28	YER044C	BRL1	P38770	471 aa		4.87	□□□□□ -1.63
ERG28	YER044C	MTC5	Q03897	1148 aa		4.87	□□□□□ -1.63
ERG28	YER044C	ITT1	Q04638	464 aa		4.87	□□□□□ -1.63
ERG28	YER044C	PUS5	Q06244	254 aa		4.87	□□□□□ -1.63
ERG28	YER044C	YDJ1	P25491	409 aa	Known RBP	4.86	□□□□□ -1.63
ERG28	YER044C	HXT10	P43581	546 aa		4.86	□□□□□ -1.63
ERG28	YER044C	MDS3	P53094	1487 aa		4.86	□□□□□ -1.63
ERG28	YER044C	MAK16	P10962	306 aa	Predicted RBP	4.85	□□□□□ -1.63
ERG28	YER044C	YBL036C	P38197	257 aa		4.85	□□□□□ -1.63
ERG28	YER044C	BIM1	P40013	344 aa		4.85	□□□□□ -1.63
ERG28	YER044C	ATG32	P40458	529 aa		4.85	□□□□□ -1.63
ERG28	YER044C	TBF1	Q02457	562 aa		4.85	□□□□□ -1.63
ERG28	YER044C	MET32	Q12041	191 aa		4.85	□□□□□ -1.63
ERG28	YER044C	PAT1	P25644	796 aa	Known RBP	4.84	□□□□□ -1.63
ERG28	YER044C	TPD3	P31383	635 aa		4.84	□□□□□ -1.63
ERG28	YER044C	RRD1	P40454	393 aa	Known RBP	4.84	□□□□□ -1.63
ERG28	YER044C	YJL007C	P47080	104 aa		4.84	□□□□□ -1.63
ERG28	YER044C	FIG4	P42837	879 aa		4.83	□□□□□ -1.64
ERG28	YER044C	KXD1	P53158	218 aa		4.83	□□□□□ -1.64
ERG28	YER044C	ALR1	Q08269	859 aa		4.83	□□□□□ -1.64
ERG28	YER044C	HSL1	P34244	1518 aa		4.82	□□□□□ -1.64
ERG28	YER044C	YNL108C	P53929	270 aa		4.82	□□□□□ -1.64
ERG28	YER044C	YPR084W	Q06821	456 aa		4.82	□□□□□ -1.64
ERG28	YER044C	ENO2	P00925	437 aa	Known RBP	4.81	□□□□□ -1.64
ERG28	YER044C	SUP45	P12385	437 aa	Known RBP	4.81	□□□□□ -1.64
ERG28	YER044C	AFT1	P22149	690 aa		4.81	□□□□□ -1.64
ERG28	YER044C	CSE4	P36012	229 aa		4.81	□□□□□ -1.64
ERG28	YER044C	HST3	P53687	447 aa		4.81	□□□□□ -1.64
ERG28	YER044C	VAC17	P25591	423 aa		4.8	□□□□□ -1.64
ERG28	YER044C	ISF1	P32488	338 aa		4.8	□□□□□ -1.64
ERG28	YER044C	PEP1	P32319	1579 aa		4.79	□□□□□ -1.64
ERG28	YER044C	BPT1	P14772	1559 aa		4.78	□□□□□ -1.64
ERG28	YER044C	TIF1	P10081	395 aa	Known RBP	4.78	□□□□□ -1.64
ERG28	YER044C	YJR115W	P47152	169 aa		4.78	□□□□□ -1.64
ERG28	YER044C	CAF120	P53836	1060 aa		4.78	□□□□□ -1.64
ERG28	YER044C	MCM16	Q12262	181 aa		4.77	□□□□□ -1.65
ERG28	YER044C	RDS2	P19541	446 aa	Known RBP	4.76	□□□□□ -1.65
ERG28	YER044C	NAF1	P53919	492 aa	Known RBP	4.76	□□□□□ -1.65
ERG28	YER044C	ENO1	P00924	437 aa	Known RBP	4.75	□□□□□ -1.65
ERG28	YER044C	TEC1	P18412	486 aa		4.75	□□□□□ -1.65
ERG28	YER044C	EMP47	P43555	445 aa		4.75	□□□□□ -1.65
ERG28	YER044C	RIM21	P48565	533 aa		4.75	□□□□□ -1.65
ERG28	YER044C	MRX10	Q05648	414 aa		4.75	□□□□□ -1.65
ERG28	YER044C	LTE1	P07866	1435 aa		4.74	□□□□□ -1.65
ERG28	YER044C	SPT5	P27692	1063 aa	Known RBP	4.74	□□□□□ -1.65
ERG28	YER044C	IXR1	P33417	597 aa		4.74	□□□□□ -1.65
ERG28	YER044C	APP1	P53933	587 aa		4.74	□□□□□ -1.65
ERG28	YER044C	YPR204W	Q08995	1032 aa		4.74	□□□□□ -1.65
ERG28	YER044C	TRK2	P28584	889 aa		4.73	□□□□□ -1.65
ERG28	YER044C	RTG2	P32608	588 aa	Known RBP	4.73	□□□□□ -1.65
ERG28	YER044C	HGH1	P48362	394 aa	Known RBP	4.73	□□□□□ -1.65
ERG28	YER044C	SYH1	Q02875	849 aa	Known RBP	4.73	□□□□□ -1.65
ERG28	YER044C	FRA1	Q07825	749 aa		4.73	□□□□□ -1.65
ERG28	YER044C	KIP2	P28743	706 aa		4.72	□□□□□ -1.65
ERG28	YER044C	GUT2	P32191	649 aa		4.72	□□□□□ -1.65
ERG28	YER044C	APL6	P46682	809 aa		4.72	□□□□□ -1.65
ERG28	YER044C	MRT4	P33201	236 aa	Known RBP	4.71	□□□□□ -1.66
ERG28	YER044C	ACO2	P39533	789 aa		4.71	□□□□□ -1.66
ERG28	YER044C	EMW1	P42842	904 aa	Known RBP	4.71	□□□□□ -1.66
ERG28	YER044C	YCF1	P39109	1515 aa	Known RBP	4.71	□□□□□ -1.66
ERG28	YER044C	SGS1	P35187	1447 aa		4.71	□□□□□ -1.66
ERG28	YER044C	MET5	P47169	1442 aa		4.71	□□□□□ -1.66
ERG28	YER044C	HAL5	P38970	855 aa	Known RBP	4.7	□□□□□ -1.66
ERG28	YER044C	STE20	Q03497	939 aa	Known RBP	4.7	□□□□□ -1.66
ERG28	YER044C	PEP12	P32854	288 aa		4.69	□□□□□ -1.66
ERG28	YER044C	TTI1	P36097	1038 aa		4.69	□□□□□ -1.66
ERG28	YER044C	RPL34B	P40525	121 aa	Known RBP	4.69	□□□□□ -1.66
ERG28	YER044C	RLF2	Q12495	606 aa		4.69	□□□□□ -1.66
ERG28	YER044C	TAF2	P23255	1407 aa		4.69	□□□□□ -1.66
ERG28	YER044C	MYO2	P19524	1574 aa	Known RBP	4.69	□□□□□ -1.66
ERG28	YER044C	HIR3	P47171	1648 aa		4.68	□□□□□ -1.66
ERG28	YER044C	CPS1	P27614	576 aa		4.67	□□□□□ -1.66
ERG28	YER044C	YBL086C	P38177	466 aa		4.67	□□□□□ -1.66
ERG28	YER044C	SOH1	P38633	127 aa		4.67	□□□□□ -1.66
ERG28	YER044C	YGR035C	P53222	116 aa		4.67	□□□□□ -1.66
ERG28	YER044C	OPT2	Q06593	877 aa		4.67	□□□□□ -1.66
ERG28	YER044C	DFG5	Q05031	458 aa		4.65	□□□□□ -1.67
ERG28	YER044C	HPF1	Q05164	967 aa		4.65	□□□□□ -1.67
ERG28	YER044C	ISR1	Q06098	443 aa	Known RBP	4.65	□□□□□ -1.67
ERG28	YER044C	DNF1	P32660	1571 aa		4.65	□□□□□ -1.67
ERG28	YER044C	KTR7	P40504	517 aa		4.64	□□□□□ -1.67
ERG28	YER044C	YPP1	P46951	817 aa		4.64	□□□□□ -1.67
ERG28	YER044C	MRX12	P47084	519 aa		4.64	□□□□□ -1.67
ERG28	YER044C	ATG20	Q07528	640 aa		4.64	□□□□□ -1.67
ERG28	YER044C	MKS1	P34072	584 aa		4.63	□□□□□ -1.67
ERG28	YER044C	YIR007W	P40566	764 aa		4.63	□□□□□ -1.67
ERG28	YER044C	MSB3	P48566	633 aa	Predicted RBP	4.63	□□□□□ -1.67
ERG28	YER044C	STE6	P12866	1290 aa		4.62	□□□□□ -1.67
ERG28	YER044C	FBP26	P32604	452 aa		4.62	□□□□□ -1.67
ERG28	YER044C	ISU1	Q03020	165 aa		4.62	□□□□□ -1.67
ERG28	YER044C	YML083C	Q04526	418 aa		4.62	□□□□□ -1.67
ERG28	YER044C	NOB1	Q08444	459 aa	Known RBP	4.62	□□□□□ -1.67
ERG28	YER044C	GEA2	P39993	1459 aa	Known RBP	4.62	□□□□□ -1.67
ERG28	YER044C	PUP1	P25043	261 aa		4.61	□□□□□ -1.67
ERG28	YER044C	UGA3	P26370	528 aa		4.61	□□□□□ -1.67
ERG28	YER044C	PTK2	P47116	818 aa	Known RBP	4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms