RNA–Protein interactions for RNA: YER044C

ERG28, Transcript of Endoplasmic reticulum membrane protein, yeastyeast

Gene ERG28, Length 447 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERG28YER044C FAP1P53971 965 aa10.43□□□□□ -0.74
ERG28YER044C MTC1P47018 478 aaKnown RBP10.27□□□□□ -0.77
ERG28YER044C PRY3P47033 881 aa9.84□□□□□ -0.83
ERG28YER044C AAD16Q02895 342 aa9.29□□□□□ -0.92
ERG28YER044C YCK3P39962 524 aa9.26□□□□□ -0.93
ERG28YER044C PRI1P10363 409 aa9.22□□□□□ -0.93
ERG28YER044C DRS1P32892 752 aaKnown RBP9.16□□□□□ -0.94
ERG28YER044C HAA1Q12753 694 aaKnown RBP9.1□□□□□ -0.95
ERG28YER044C ISW2Q08773 1120 aa8.72□□□□□ -1.01
ERG28YER044C RPG1P38249 964 aaKnown RBP8.71□□□□□ -1.02
ERG28YER044C TSR3Q12094 313 aaKnown RBP8.71□□□□□ -1.02
ERG28YER044C MRPL32P25348 183 aa8.33□□□□□ -1.08
ERG28YER044C YGL015CP33199 130 aa8.25□□□□□ -1.09
ERG28YER044C BUD31P25337 157 aaPredicted RBP7.99□□□□□ -1.13
ERG28YER044C DIP2Q12220 943 aaPredicted RBP7.92□□□□□ -1.14
ERG28YER044C RSE1Q04693 1361 aaKnown RBP7.91□□□□□ -1.14
ERG28YER044C BFR2Q06631 534 aaKnown RBP7.82□□□□□ -1.16
ERG28YER044C REB1P21538 810 aa7.81□□□□□ -1.16
ERG28YER044C AVT3P36062 692 aa7.77□□□□□ -1.17
ERG28YER044C CDC27P38042 758 aa7.77□□□□□ -1.17
ERG28YER044C RPL17AP05740 184 aaKnown RBP7.76□□□□□ -1.17
ERG28YER044C RPL17BP46990 184 aaKnown RBP7.76□□□□□ -1.17
ERG28YER044C MAP2P38174 421 aaKnown RBP7.64□□□□□ -1.19
ERG28YER044C UBP10P53874 792 aaPredicted RBP7.59□□□□□ -1.19
ERG28YER044C SIS1P25294 352 aaKnown RBP7.55□□□□□ -1.2
ERG28YER044C YKR023WP36119 530 aaKnown RBP7.49□□□□□ -1.21
ERG28YER044C DCD1P06773 312 aa7.4□□□□□ -1.22
ERG28YER044C HOP09932 586 aa7.37□□□□□ -1.23
ERG28YER044C UBP9P39967 754 aa7.36□□□□□ -1.23
ERG28YER044C TFC8Q12308 588 aa7.33□□□□□ -1.24
ERG28YER044C SPT21P35209 758 aa7.31□□□□□ -1.24
ERG28YER044C TIF4632P39936 914 aaKnown RBP7.3□□□□□ -1.24
ERG28YER044C SCY1P53009 804 aa7.3□□□□□ -1.24
ERG28YER044C TGL3P40308 642 aa7.29□□□□□ -1.24
ERG28YER044C TFA1P36100 482 aa7.27□□□□□ -1.25
ERG28YER044C SLX5P32828 619 aaKnown RBP7.24□□□□□ -1.25
ERG28YER044C BCH2P36122 765 aa7.06□□□□□ -1.28
ERG28YER044C YBL029C-AQ3E756 94 aa6.97□□□□□ -1.29
ERG28YER044C MST1P07236 462 aa6.85□□□□□ -1.31
ERG28YER044C RIM101P33400 625 aa6.84□□□□□ -1.31
ERG28YER044C VNX1P42839 908 aa6.83□□□□□ -1.32
ERG28YER044C BDF1P35817 686 aa6.81□□□□□ -1.32
ERG28YER044C EPS1P40557 701 aa6.81□□□□□ -1.32
ERG28YER044C YOR238WQ08634 303 aa6.81□□□□□ -1.32
ERG28YER044C SPP1Q03012 353 aa6.75□□□□□ -1.33
ERG28YER044C WSC3Q12215 556 aa6.73□□□□□ -1.33
ERG28YER044C AIR2Q12476 344 aaKnown RBP6.72□□□□□ -1.33
ERG28YER044C YJL171CP46992 396 aa6.71□□□□□ -1.34
ERG28YER044C OXP1P28273 1286 aa6.67□□□□□ -1.34
ERG28YER044C FKH1P40466 484 aa6.64□□□□□ -1.35
ERG28YER044C NSR1P27476 414 aaKnown RBP RIP-Chip data6.61□□□□□ -1.35not detected
ERG28YER044C YAP5P40574 245 aa6.61□□□□□ -1.35
ERG28YER044C TIF11P38912 153 aaKnown RBP6.6□□□□□ -1.35
ERG28YER044C PTP3P40048 928 aa6.55□□□□□ -1.36
ERG28YER044C LDB19Q12502 818 aa6.54□□□□□ -1.36
ERG28YER044C BMT6Q12291 365 aa6.52□□□□□ -1.37
ERG28YER044C GTT3P39996 337 aa6.51□□□□□ -1.37
ERG28YER044C YIL055CP40523 627 aaKnown RBP6.51□□□□□ -1.37
ERG28YER044C ULI1P43604 169 aa6.49□□□□□ -1.37
ERG28YER044C BBC1P47068 1157 aa6.48□□□□□ -1.37
ERG28YER044C IOC2Q12072 812 aa6.47□□□□□ -1.37
ERG28YER044C YAH1Q12184 172 aaKnown RBP6.47□□□□□ -1.37
ERG28YER044C AI2P03876 854 aa6.43□□□□□ -1.38
ERG28YER044C YLR271WQ06152 274 aa6.42□□□□□ -1.38
ERG28YER044C PIB1Q06651 286 aa6.42□□□□□ -1.38
ERG28YER044C RSM7P47150 247 aa6.4□□□□□ -1.38
ERG28YER044C SSP1P38871 571 aa6.39□□□□□ -1.39
ERG28YER044C RTG1P32607 177 aa6.32□□□□□ -1.4
ERG28YER044C NCR1Q12200 1170 aa6.3□□□□□ -1.4
ERG28YER044C MSB4Q12317 492 aa6.27□□□□□ -1.41
ERG28YER044C TRP5P00931 707 aaKnown RBP6.26□□□□□ -1.41
ERG28YER044C EAP1P36041 632 aaKnown RBP6.26□□□□□ -1.41
ERG28YER044C PSD2P53037 1138 aaKnown RBP6.26□□□□□ -1.41
ERG28YER044C SET4P42948 560 aa6.25□□□□□ -1.41
ERG28YER044C CST9Q06032 482 aa6.23□□□□□ -1.41
ERG28YER044C YOL036WQ08206 761 aa6.23□□□□□ -1.41
ERG28YER044C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
ERG28YER044C YNL035CP53962 389 aaKnown RBP6.2□□□□□ -1.42
ERG28YER044C SEC61P32915 480 aa6.19□□□□□ -1.42
ERG28YER044C MRM1P25270 412 aa6.17□□□□□ -1.42
ERG28YER044C MGA2P40578 1113 aa6.17□□□□□ -1.42
ERG28YER044C BCK2P33306 851 aa6.16□□□□□ -1.42
ERG28YER044C SAP30P38429 201 aa6.14□□□□□ -1.43
ERG28YER044C TFG1P41895 735 aaPredicted RBP6.12□□□□□ -1.43
ERG28YER044C YFR006WP43590 535 aa6.09□□□□□ -1.43
ERG28YER044C CHL1P22516 861 aaPredicted RBP6.08□□□□□ -1.44
ERG28YER044C DBP1P24784 617 aaKnown RBP6.08□□□□□ -1.44
ERG28YER044C RCR1P38212 213 aa6.07□□□□□ -1.44
ERG28YER044C VMA1P17255 1071 aaKnown RBP6.05□□□□□ -1.44
ERG28YER044C YMR1P47147 688 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
ERG28YER044C DAN4P47179 1161 aa6.05□□□□□ -1.44
ERG28YER044C VPS29P38759 282 aa6.04□□□□□ -1.44
ERG28YER044C PRE3P38624 215 aa6.03□□□□□ -1.44
ERG28YER044C YDL129WQ07555 291 aa6.03□□□□□ -1.44
ERG28YER044C SAM3Q08986 587 aa6.02□□□□□ -1.45
ERG28YER044C STS1P38637 319 aa6□□□□□ -1.45
ERG28YER044C JIP4Q03361 876 aa5.99□□□□□ -1.45
ERG28YER044C RAM2P29703 316 aa5.98□□□□□ -1.45
ERG28YER044C VRP1P37370 817 aa5.97□□□□□ -1.45
ERG28YER044C RQC2Q12532 1038 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms