RNA–Protein interactions for RNA: YDR268W

MSW1, Transcript of Mitochondrial tryptophanyl-tRNA synthetase, yeastyeast

Gene MSW1, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSW1YDR268W ATF2P53296 535 aa6.69□□□□□ -1.34
MSW1YDR268W YNR021WP53723 404 aaKnown RBP6.69□□□□□ -1.34
MSW1YDR268W YDR444WQ04093 687 aa6.69□□□□□ -1.34
MSW1YDR268W YPR097WQ06839 1073 aa6.69□□□□□ -1.34
MSW1YDR268W TRM1P15565 570 aaKnown RBP6.68□□□□□ -1.34
MSW1YDR268W SCJ1P25303 377 aa6.68□□□□□ -1.34
MSW1YDR268W BUB1P41695 1021 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
MSW1YDR268W ESP1Q03018 1630 aa6.68□□□□□ -1.34
MSW1YDR268W MSB3P48566 633 aaPredicted RBP6.67□□□□□ -1.34
MSW1YDR268W LCB5Q06147 687 aaKnown RBP6.67□□□□□ -1.34
MSW1YDR268W MMP1Q12372 583 aa6.67□□□□□ -1.34
MSW1YDR268W YJR115WP47152 169 aa6.66□□□□□ -1.34
MSW1YDR268W UFD4P33202 1483 aa6.66□□□□□ -1.34
MSW1YDR268W GLN1P32288 370 aaKnown RBP6.65□□□□□ -1.34
MSW1YDR268W GLC3P32775 704 aa6.64□□□□□ -1.35
MSW1YDR268W MYO2P19524 1574 aaKnown RBP6.63□□□□□ -1.35
MSW1YDR268W KIP2P28743 706 aa6.63□□□□□ -1.35
MSW1YDR268W ESS1P22696 170 aa6.61□□□□□ -1.35
MSW1YDR268W IXR1P33417 597 aa6.61□□□□□ -1.35
MSW1YDR268W SCC2Q04002 1493 aa6.6□□□□□ -1.35
MSW1YDR268W UGA3P26370 528 aa6.6□□□□□ -1.35
MSW1YDR268W MRT4P33201 236 aaKnown RBP6.6□□□□□ -1.35
MSW1YDR268W YDL176WQ12027 708 aa6.6□□□□□ -1.35
MSW1YDR268W YPK9Q12697 1472 aa6.6□□□□□ -1.35
MSW1YDR268W AIM7Q12156 149 aa6.59□□□□□ -1.35
MSW1YDR268W YJU3P28321 313 aa6.58□□□□□ -1.36
MSW1YDR268W RTT106P40161 455 aa6.58□□□□□ -1.36
MSW1YDR268W PTK2P47116 818 aaKnown RBP6.57□□□□□ -1.36
MSW1YDR268W TYW1Q08960 810 aaKnown RBP6.57□□□□□ -1.36
MSW1YDR268W RSC30P38781 883 aa6.56□□□□□ -1.36
MSW1YDR268W VAC17P25591 423 aa6.55□□□□□ -1.36
MSW1YDR268W SRF1Q12516 437 aa6.55□□□□□ -1.36
MSW1YDR268W CDC25P04821 1589 aa6.54□□□□□ -1.36
MSW1YDR268W KTR1P27810 393 aaKnown RBP6.54□□□□□ -1.36
MSW1YDR268W RPO31P04051 1460 aa6.53□□□□□ -1.36
MSW1YDR268W ESC1Q03661 1658 aaKnown RBP6.53□□□□□ -1.36
MSW1YDR268W PKH3Q03306 898 aaPredicted RBP6.53□□□□□ -1.36
MSW1YDR268W CHD1P32657 1468 aa6.53□□□□□ -1.36
MSW1YDR268W YLR346CQ06139 101 aa6.52□□□□□ -1.37
MSW1YDR268W OPT2Q06593 877 aa6.52□□□□□ -1.37
MSW1YDR268W NUP85P46673 744 aa6.51□□□□□ -1.37
MSW1YDR268W DMA2P53924 522 aa6.51□□□□□ -1.37
MSW1YDR268W CSN12P47130 423 aa6.5□□□□□ -1.37
MSW1YDR268W TY2B-LR1P0C2J3 1770 aa6.49□□□□□ -1.37
MSW1YDR268W TY2B-FP0CX63 1770 aa6.49□□□□□ -1.37
MSW1YDR268W TY2B-GR2P0CX64 1770 aa6.49□□□□□ -1.37
MSW1YDR268W TY2B-CP25384 1770 aa6.49□□□□□ -1.37
MSW1YDR268W TY2B-DR2Q03494 1770 aa6.49□□□□□ -1.37
MSW1YDR268W TY1B-DR1Q03855 1755 aa6.49□□□□□ -1.37
MSW1YDR268W TY2B-DR3Q07791 1770 aaKnown RBP6.49□□□□□ -1.37
MSW1YDR268W TY2B-OR1Q12113 1770 aa6.49□□□□□ -1.37
MSW1YDR268W TY2B-DR1Q12472 1770 aa6.49□□□□□ -1.37
MSW1YDR268W TY2B-OR2Q12501 1770 aa6.49□□□□□ -1.37
MSW1YDR268W DNF1P32660 1571 aa6.49□□□□□ -1.37
MSW1YDR268W KIN1P13185 1064 aa6.49□□□□□ -1.37
MSW1YDR268W ARG8P18544 423 aa6.49□□□□□ -1.37
MSW1YDR268W YBL086CP38177 466 aa6.49□□□□□ -1.37
MSW1YDR268W ACO2P39533 789 aa6.49□□□□□ -1.37
MSW1YDR268W GLY1P37303 387 aaKnown RBP6.48□□□□□ -1.37
MSW1YDR268W CAF120P53836 1060 aa6.48□□□□□ -1.37
MSW1YDR268W MET5P47169 1442 aa6.47□□□□□ -1.37
MSW1YDR268W PAN1P32521 1480 aa6.47□□□□□ -1.37
MSW1YDR268W EMW1P42842 904 aaKnown RBP6.46□□□□□ -1.38
MSW1YDR268W RKR1Q04781 1562 aa6.46□□□□□ -1.38
MSW1YDR268W TY1B-BRQ12193 1756 aa6.46□□□□□ -1.38
MSW1YDR268W TY1B-GR3Q12316 1755 aa6.46□□□□□ -1.38
MSW1YDR268W TY1B-ORQ92393 1755 aa6.46□□□□□ -1.38
MSW1YDR268W ARG82P07250 355 aa6.45□□□□□ -1.38
MSW1YDR268W AAD14P42884 376 aa6.45□□□□□ -1.38
MSW1YDR268W RAD59Q12223 238 aa6.45□□□□□ -1.38
MSW1YDR268W TOP2P06786 1428 aaKnown RBP6.44□□□□□ -1.38
MSW1YDR268W MIP1P15801 1254 aa6.44□□□□□ -1.38
MSW1YDR268W FIG4P42837 879 aa6.44□□□□□ -1.38
MSW1YDR268W SCW11P53189 542 aa6.44□□□□□ -1.38
MSW1YDR268W APP1P53933 587 aa6.44□□□□□ -1.38
MSW1YDR268W LTE1P07866 1435 aa6.43□□□□□ -1.38
MSW1YDR268W LSC2P53312 427 aa6.43□□□□□ -1.38
MSW1YDR268W ITT1Q04638 464 aa6.43□□□□□ -1.38
MSW1YDR268W TY1A-BLQ12266 440 aa6.43□□□□□ -1.38
MSW1YDR268W RPA190P10964 1664 aaKnown RBP6.42□□□□□ -1.38
MSW1YDR268W TY2B-BQ12491 1770 aa6.41□□□□□ -1.38
MSW1YDR268W MMS22Q06164 1454 aa6.41□□□□□ -1.38
MSW1YDR268W TRM732Q03496 1420 aa6.41□□□□□ -1.38
MSW1YDR268W SSA2P10592 639 aaKnown RBP6.4□□□□□ -1.38
MSW1YDR268W TEC1P18412 486 aa6.4□□□□□ -1.38
MSW1YDR268W YIR007WP40566 764 aa6.4□□□□□ -1.38
MSW1YDR268W POL1P13382 1468 aa6.4□□□□□ -1.39
MSW1YDR268W TY1B-HO13535 1793 aa6.39□□□□□ -1.39
MSW1YDR268W TY1B-DR5P0C2I2 1755 aa6.39□□□□□ -1.39
MSW1YDR268W TY1B-DR6P0C2I3 1755 aa6.39□□□□□ -1.39
MSW1YDR268W TY1B-LR2P0C2I5 1755 aa6.39□□□□□ -1.39
MSW1YDR268W TY1B-LR3P0C2I6 1755 aaKnown RBP6.39□□□□□ -1.39
MSW1YDR268W TY1B-PR1P0C2I9 1755 aaKnown RBP6.39□□□□□ -1.39
MSW1YDR268W TY1B-PR2P0C2J0 1756 aa6.39□□□□□ -1.39
MSW1YDR268W TY1B-PR3P0C2J1 1755 aaKnown RBP6.39□□□□□ -1.39
MSW1YDR268W TY1B-JR1P47098 1755 aa6.39□□□□□ -1.39
MSW1YDR268W TY1B-ML2Q03434 1755 aaKnown RBP6.39□□□□□ -1.39
MSW1YDR268W TY1B-ER1Q03612 1755 aa6.39□□□□□ -1.39
MSW1YDR268W TY1B-ML1Q04711 1755 aaKnown RBP6.39□□□□□ -1.39
MSW1YDR268W TY1B-GR2Q12269 1755 aa6.39□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms