RNA–Protein interactions for RNA: YDL047W

SIT4, Transcript of Type 2A-related serine-threonine phosphatase, yeastyeast

Gene SIT4, Length 936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIT4YDL047W GRX4P32642 244 aa8.07□□□□□ -1.12
SIT4YDL047W OSM1P21375 501 aaKnown RBP8.06□□□□□ -1.12
SIT4YDL047W SEC3P33332 1336 aaKnown RBP8.04□□□□□ -1.12
SIT4YDL047W CTT1P06115 562 aa8.04□□□□□ -1.12
SIT4YDL047W RTG3P38165 486 aa8.04□□□□□ -1.12
SIT4YDL047W INP54Q08227 384 aaKnown RBP8.04□□□□□ -1.12
SIT4YDL047W AUS1Q08409 1394 aa8.04□□□□□ -1.12
SIT4YDL047W MSN5P52918 1224 aa8.03□□□□□ -1.12
SIT4YDL047W HPC2Q01448 625 aa8.02□□□□□ -1.13
SIT4YDL047W HIM1Q06674 414 aa8.02□□□□□ -1.13
SIT4YDL047W YKL222CP35995 705 aa8□□□□□ -1.13
SIT4YDL047W RRT14P40470 206 aa8□□□□□ -1.13
SIT4YDL047W MHP1P43638 1398 aa7.99□□□□□ -1.13
SIT4YDL047W ERT1P38140 529 aa7.99□□□□□ -1.13
SIT4YDL047W YCK3P39962 524 aa7.99□□□□□ -1.13
SIT4YDL047W YBP2P53169 641 aa7.99□□□□□ -1.13
SIT4YDL047W YER156CP40093 338 aaKnown RBP7.98□□□□□ -1.13
SIT4YDL047W KIN4Q01919 800 aa7.98□□□□□ -1.13
SIT4YDL047W TUM1Q08686 304 aaKnown RBP7.98□□□□□ -1.13
SIT4YDL047W CTF4Q01454 927 aa7.97□□□□□ -1.13
SIT4YDL047W RIX7Q07844 837 aaKnown RBP7.97□□□□□ -1.13
SIT4YDL047W CWH41P53008 833 aa7.96□□□□□ -1.14
SIT4YDL047W NUP145P49687 1317 aa7.96□□□□□ -1.14
SIT4YDL047W PEX21P50091 288 aa7.95□□□□□ -1.14
SIT4YDL047W DSD1P53095 428 aa7.95□□□□□ -1.14
SIT4YDL047W SQS1P53866 767 aaKnown RBP7.95□□□□□ -1.14
SIT4YDL047W NST1P53935 1240 aa7.95□□□□□ -1.14
SIT4YDL047W NYV1Q12255 253 aa7.95□□□□□ -1.14
SIT4YDL047W HSP104P31539 908 aaKnown RBP7.94□□□□□ -1.14
SIT4YDL047W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.94□□□□□ -1.14not detected
SIT4YDL047W TOM1Q03280 3268 aa7.94□□□□□ -1.14
SIT4YDL047W KAR2P16474 682 aaKnown RBP7.93□□□□□ -1.14
SIT4YDL047W SSA4P22202 642 aaKnown RBP7.93□□□□□ -1.14
SIT4YDL047W PFF1P38244 976 aa7.91□□□□□ -1.14
SIT4YDL047W FPK1P53739 893 aa7.91□□□□□ -1.14
SIT4YDL047W PDS5Q04264 1277 aa7.91□□□□□ -1.14
SIT4YDL047W PUS5Q06244 254 aa7.91□□□□□ -1.14
SIT4YDL047W CTI6Q08923 506 aa7.91□□□□□ -1.14
SIT4YDL047W AAD16Q02895 342 aa7.9□□□□□ -1.14
SIT4YDL047W BUD27P43573 796 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
SIT4YDL047W MDG1P53885 366 aa7.89□□□□□ -1.15
SIT4YDL047W RMT2Q03305 412 aa7.89□□□□□ -1.15
SIT4YDL047W LPD1P09624 499 aaKnown RBP7.88□□□□□ -1.15
SIT4YDL047W AKL1P38080 1108 aaKnown RBP7.88□□□□□ -1.15
SIT4YDL047W TEA1P47988 759 aa7.88□□□□□ -1.15
SIT4YDL047W AOS1Q06624 347 aa7.88□□□□□ -1.15
SIT4YDL047W RPS9BP05755 195 aaKnown RBP7.87□□□□□ -1.15
SIT4YDL047W NOP53Q12080 455 aaKnown RBP7.87□□□□□ -1.15
SIT4YDL047W PHM7Q12252 991 aa7.87□□□□□ -1.15
SIT4YDL047W SMY1P32364 656 aaKnown RBP7.86□□□□□ -1.15
SIT4YDL047W PAP2P53632 584 aaKnown RBP7.86□□□□□ -1.15
SIT4YDL047W KCC4P25389 1037 aa7.85□□□□□ -1.15
SIT4YDL047W SER1P33330 395 aaKnown RBP7.85□□□□□ -1.15
SIT4YDL047W YFR016CP43597 1233 aaKnown RBP7.85□□□□□ -1.15
SIT4YDL047W RAT1Q02792 1006 aaKnown RBP7.85□□□□□ -1.15
SIT4YDL047W ERO1Q03103 563 aa7.85□□□□□ -1.15
SIT4YDL047W NTH2P35172 780 aa7.84□□□□□ -1.15
SIT4YDL047W AVT3P36062 692 aa7.84□□□□□ -1.15
SIT4YDL047W SLI15P38283 698 aa7.83□□□□□ -1.16
SIT4YDL047W ATG20Q07528 640 aa7.83□□□□□ -1.16
SIT4YDL047W SIT4P20604 311 aa7.82□□□□□ -1.16
SIT4YDL047W RET1P22276 1149 aaKnown RBP7.82□□□□□ -1.16
SIT4YDL047W ICL1P28240 557 aaPredicted RBP7.82□□□□□ -1.16
SIT4YDL047W SHC1P39000 512 aa7.82□□□□□ -1.16
SIT4YDL047W DIB1Q06819 143 aaPredicted RBP7.82□□□□□ -1.16
SIT4YDL047W BDF2Q07442 638 aa7.82□□□□□ -1.16
SIT4YDL047W TOP1P04786 769 aa7.81□□□□□ -1.16
SIT4YDL047W YKU70P32807 602 aa7.81□□□□□ -1.16
SIT4YDL047W IRC3Q06683 689 aa7.81□□□□□ -1.16
SIT4YDL047W ALE1Q08548 619 aa7.81□□□□□ -1.16
SIT4YDL047W SSP2Q08646 371 aa7.81□□□□□ -1.16
SIT4YDL047W UTP10P42945 1769 aaKnown RBP7.81□□□□□ -1.16
SIT4YDL047W TRK1P12685 1235 aa7.8□□□□□ -1.16
SIT4YDL047W YGL082WP53155 381 aa7.8□□□□□ -1.16
SIT4YDL047W UGA3P26370 528 aa7.79□□□□□ -1.16
SIT4YDL047W POL5P39985 1022 aaKnown RBP7.79□□□□□ -1.16
SIT4YDL047W FAS2P19097 1887 aaKnown RBP7.79□□□□□ -1.16
SIT4YDL047W THS1P04801 734 aaKnown RBP7.78□□□□□ -1.16
SIT4YDL047W GRX6Q12438 231 aa7.78□□□□□ -1.16
SIT4YDL047W RTG2P32608 588 aaKnown RBP7.77□□□□□ -1.17
SIT4YDL047W YLR278CQ05854 1341 aa7.77□□□□□ -1.17
SIT4YDL047W CAF20P12962 161 aaKnown RBP7.76□□□□□ -1.17
SIT4YDL047W ARG8P18544 423 aa7.76□□□□□ -1.17
SIT4YDL047W NSE3Q05541 303 aa7.76□□□□□ -1.17
SIT4YDL047W PMD1P32634 1753 aa7.76□□□□□ -1.17
SIT4YDL047W DCD1P06773 312 aa7.75□□□□□ -1.17
SIT4YDL047W YNL050CP53952 270 aa7.75□□□□□ -1.17
SIT4YDL047W DIP2Q12220 943 aaPredicted RBP7.75□□□□□ -1.17
SIT4YDL047W DUS1P53759 423 aaKnown RBP7.74□□□□□ -1.17
SIT4YDL047W SYF1Q04048 859 aaPredicted RBP7.74□□□□□ -1.17
SIT4YDL047W RRP46P53256 223 aaPredicted RBP7.73□□□□□ -1.17
SIT4YDL047W UBP16Q02863 499 aa7.73□□□□□ -1.17
SIT4YDL047W YPR204WQ08995 1032 aa7.73□□□□□ -1.17
SIT4YDL047W MSM1P22438 575 aa7.72□□□□□ -1.17
SIT4YDL047W ETP1P38748 585 aaKnown RBP7.72□□□□□ -1.17
SIT4YDL047W VHR2P40041 505 aa7.72□□□□□ -1.17
SIT4YDL047W DPL1Q05567 589 aa7.72□□□□□ -1.17
SIT4YDL047W HAT1Q12341 374 aa7.72□□□□□ -1.17
SIT4YDL047W SSK22P25390 1331 aaPredicted RBP7.72□□□□□ -1.17
SIT4YDL047W FRD1P32614 470 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms