RNA–Protein interactions for RNA: YCR072C

RSA4, Transcript of WD-repeat protein involved in ribosome biogenesis, yeast

Gene RSA4, Length 1,548 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA4	YCR072C	RGA1	P39083	1007 aa		7.65	□□□□□ -1.18
RSA4	YCR072C	TBF1	Q02457	562 aa		7.65	□□□□□ -1.18
RSA4	YCR072C	SNU71	P53207	620 aa	Known RBP	7.64	□□□□□ -1.19
RSA4	YCR072C	YGR130C	P53278	816 aa		7.64	□□□□□ -1.19
RSA4	YCR072C	PEP1	P32319	1579 aa		7.63	□□□□□ -1.19
RSA4	YCR072C	GEF1	P37020	779 aa		7.63	□□□□□ -1.19
RSA4	YCR072C	YRB30	P53107	440 aa	Predicted RBP	7.63	□□□□□ -1.19
RSA4	YCR072C	HST3	P53687	447 aa		7.63	□□□□□ -1.19
RSA4	YCR072C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	7.62	□□□□□ -1.19	not detected
RSA4	YCR072C	GAR1	P28007	205 aa	Known RBP	7.62	□□□□□ -1.19
RSA4	YCR072C	NOP7	P53261	605 aa	Known RBP	7.62	□□□□□ -1.19
RSA4	YCR072C	CFT1	Q06632	1357 aa	Known RBP	7.62	□□□□□ -1.19
RSA4	YCR072C	SSM4	P40318	1319 aa		7.62	□□□□□ -1.19
RSA4	YCR072C	MET32	Q12041	191 aa		7.62	□□□□□ -1.19
RSA4	YCR072C	BUD4	P47136	1447 aa		7.62	□□□□□ -1.19
RSA4	YCR072C	SSA1	P10591	642 aa	Known RBP	7.61	□□□□□ -1.19
RSA4	YCR072C	RPC31	P17890	251 aa		7.61	□□□□□ -1.19
RSA4	YCR072C	ASH1	P34233	588 aa		7.61	□□□□□ -1.19
RSA4	YCR072C	SNF7	P39929	240 aa	Known RBP	7.61	□□□□□ -1.19
RSA4	YCR072C	HXT10	P43581	546 aa		7.61	□□□□□ -1.19
RSA4	YCR072C	SRB8	P25648	1427 aa		7.61	□□□□□ -1.19
RSA4	YCR072C	RRD1	P40454	393 aa	Known RBP	7.6	□□□□□ -1.19
RSA4	YCR072C	HST2	P53686	357 aa		7.6	□□□□□ -1.19
RSA4	YCR072C	YNR021W	P53723	404 aa	Known RBP	7.6	□□□□□ -1.19
RSA4	YCR072C	NUP170	P38181	1502 aa		7.6	□□□□□ -1.19
RSA4	YCR072C	PDC1	P06169	563 aa	Known RBP	7.59	□□□□□ -1.19
RSA4	YCR072C	TPD3	P31383	635 aa		7.59	□□□□□ -1.19
RSA4	YCR072C	GLC3	P32775	704 aa		7.59	□□□□□ -1.19
RSA4	YCR072C	BRL1	P38770	471 aa		7.59	□□□□□ -1.19
RSA4	YCR072C	NUG1	P40010	520 aa	Known RBP	7.59	□□□□□ -1.19
RSA4	YCR072C	MRX12	P47084	519 aa		7.59	□□□□□ -1.19
RSA4	YCR072C	PUS6	P53294	404 aa		7.59	□□□□□ -1.19
RSA4	YCR072C	ALR1	Q08269	859 aa		7.59	□□□□□ -1.19
RSA4	YCR072C	YDL206W	Q12424	762 aa		7.59	□□□□□ -1.19
RSA4	YCR072C	SCJ1	P25303	377 aa		7.58	□□□□□ -1.2
RSA4	YCR072C	SYH1	Q02875	849 aa	Known RBP	7.58	□□□□□ -1.2
RSA4	YCR072C	MMP1	Q12372	583 aa		7.58	□□□□□ -1.2
RSA4	YCR072C	AFT1	P22149	690 aa		7.57	□□□□□ -1.2
RSA4	YCR072C	HGH1	P48362	394 aa	Known RBP	7.57	□□□□□ -1.2
RSA4	YCR072C	SUB2	Q07478	446 aa	Known RBP	7.57	□□□□□ -1.2
RSA4	YCR072C	MYO2	P19524	1574 aa	Known RBP	7.57	□□□□□ -1.2
RSA4	YCR072C	TOP2	P06786	1428 aa	Known RBP	7.57	□□□□□ -1.2
RSA4	YCR072C	GLN1	P32288	370 aa	Known RBP	7.57	□□□□□ -1.2
RSA4	YCR072C	GUA1	P38625	525 aa	Known RBP	7.57	□□□□□ -1.2
RSA4	YCR072C	RTT106	P40161	455 aa		7.57	□□□□□ -1.2
RSA4	YCR072C	YLR419W	Q06698	1435 aa	Known RBP	7.56	□□□□□ -1.2
RSA4	YCR072C	PDR10	P51533	1564 aa		7.56	□□□□□ -1.2
RSA4	YCR072C	TRM1	P15565	570 aa	Known RBP	7.56	□□□□□ -1.2
RSA4	YCR072C	RPA14	P50106	137 aa		7.56	□□□□□ -1.2
RSA4	YCR072C	ENV11	P53246	860 aa		7.56	□□□□□ -1.2
RSA4	YCR072C	STU1	P38198	1513 aa		7.55	□□□□□ -1.2
RSA4	YCR072C	YTA7	P40340	1379 aa		7.54	□□□□□ -1.2
RSA4	YCR072C	KIP2	P28743	706 aa		7.54	□□□□□ -1.2
RSA4	YCR072C	DEF1	P35732	738 aa	Known RBP	7.54	□□□□□ -1.2
RSA4	YCR072C	RIX1	P38883	763 aa	Predicted RBP	7.54	□□□□□ -1.2
RSA4	YCR072C	KRI1	P42846	591 aa	Known RBP	7.54	□□□□□ -1.2
RSA4	YCR072C	MET22	P32179	357 aa		7.53	□□□□□ -1.2
RSA4	YCR072C	PAF1	P38351	445 aa		7.53	□□□□□ -1.2
RSA4	YCR072C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.53	□□□□□ -1.2	not detected
RSA4	YCR072C	YPL062W	Q02781	134 aa		7.53	□□□□□ -1.2
RSA4	YCR072C	YPR097W	Q06839	1073 aa		7.53	□□□□□ -1.2
RSA4	YCR072C	ENV9	Q08651	330 aa		7.52	□□□□□ -1.2
RSA4	YCR072C	ESS1	P22696	170 aa		7.52	□□□□□ -1.21
RSA4	YCR072C	RNA1	P11745	407 aa	Known RBP	7.51	□□□□□ -1.21
RSA4	YCR072C	ROX1	P25042	368 aa		7.51	□□□□□ -1.21
RSA4	YCR072C	PAM1	P37304	830 aa	Known RBP	7.51	□□□□□ -1.21
RSA4	YCR072C	ATG36	P46983	293 aa		7.51	□□□□□ -1.21
RSA4	YCR072C	YDR444W	Q04093	687 aa		7.51	□□□□□ -1.21
RSA4	YCR072C	IXR1	P33417	597 aa		7.49	□□□□□ -1.21
RSA4	YCR072C	MET10	P39692	1035 aa		7.49	□□□□□ -1.21
RSA4	YCR072C	FPR4	Q06205	392 aa	Predicted RBP	7.49	□□□□□ -1.21
RSA4	YCR072C	TYW1	Q08960	810 aa	Known RBP	7.49	□□□□□ -1.21
RSA4	YCR072C	THO2	P53552	1597 aa	Known RBP	7.49	□□□□□ -1.21
RSA4	YCR072C	YJR115W	P47152	169 aa		7.48	□□□□□ -1.21
RSA4	YCR072C	RGA2	Q06407	1009 aa		7.48	□□□□□ -1.21
RSA4	YCR072C	AIM7	Q12156	149 aa		7.48	□□□□□ -1.21
RSA4	YCR072C	UGA3	P26370	528 aa		7.47	□□□□□ -1.21
RSA4	YCR072C	YIR014W	P40570	242 aa		7.47	□□□□□ -1.21
RSA4	YCR072C	MMS1	Q06211	1407 aa		7.47	□□□□□ -1.21
RSA4	YCR072C	YJU3	P28321	313 aa		7.47	□□□□□ -1.21
RSA4	YCR072C	BRN1	P38170	754 aa		7.47	□□□□□ -1.21
RSA4	YCR072C	MSB3	P48566	633 aa	Predicted RBP	7.47	□□□□□ -1.21
RSA4	YCR072C	NOP58	Q12499	511 aa	Known RBP	7.47	□□□□□ -1.21
RSA4	YCR072C	MLP2	P40457	1679 aa		7.47	□□□□□ -1.21
RSA4	YCR072C	SMC4	Q12267	1418 aa		7.46	□□□□□ -1.22
RSA4	YCR072C	PKH3	Q03306	898 aa	Predicted RBP	7.45	□□□□□ -1.22
RSA4	YCR072C	LCB5	Q06147	687 aa	Known RBP	7.45	□□□□□ -1.22
RSA4	YCR072C	SCC2	Q04002	1493 aa		7.44	□□□□□ -1.22
RSA4	YCR072C	SWE1	P32944	819 aa		7.44	□□□□□ -1.22
RSA4	YCR072C	SLN1	P39928	1220 aa	Predicted RBP	7.44	□□□□□ -1.22
RSA4	YCR072C	TFB3	Q03290	321 aa		7.44	□□□□□ -1.22
RSA4	YCR072C	SRF1	Q12516	437 aa		7.44	□□□□□ -1.22
RSA4	YCR072C	PAN1	P32521	1480 aa		7.44	□□□□□ -1.22
RSA4	YCR072C	SPC110	P32380	944 aa		7.43	□□□□□ -1.22
RSA4	YCR072C	IRC20	Q06554	1556 aa		7.43	□□□□□ -1.22
RSA4	YCR072C	ARG8	P18544	423 aa		7.42	□□□□□ -1.22
RSA4	YCR072C	RRN6	P32786	894 aa		7.42	□□□□□ -1.22
RSA4	YCR072C	SPC42	P36094	363 aa		7.42	□□□□□ -1.22
RSA4	YCR072C	FAR11	P53917	953 aa		7.42	□□□□□ -1.22
RSA4	YCR072C	CTR9	P89105	1077 aa		7.42	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 9.2 ms