RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 CAMSAP1Q5T5Y3 1602 aa25.64■■□□□ 1.7
COLCA2-206ENST00000638573 PPP6R1Q9UPN7 881 aa25.64■■□□□ 1.7
COLCA2-206ENST00000638573 NCKAP5LQ9HCH0 1330 aa25.63■■□□□ 1.69
COLCA2-206ENST00000638573 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
COLCA2-206ENST00000638573 CERKQ8TCT0 537 aa25.62■■□□□ 1.69
COLCA2-206ENST00000638573 CEP170BQ9Y4F5 1589 aaPredicted RBP25.61■■□□□ 1.69
COLCA2-206ENST00000638573 RRP7BPQ9NSQ0 103 aa25.6■■□□□ 1.69
COLCA2-206ENST00000638573 DAPK1P53355 1430 aa25.6■■□□□ 1.69
COLCA2-206ENST00000638573 CHIC2Q9UKJ5 165 aa25.59■■□□□ 1.69
COLCA2-206ENST00000638573 TCOF1Q13428 1488 aaKnown RBP25.59■■□□□ 1.69
COLCA2-206ENST00000638573 MROH1Q8NDA8 1641 aa25.58■■□□□ 1.69
COLCA2-206ENST00000638573 PZPP20742 1482 aa25.58■■□□□ 1.69
COLCA2-206ENST00000638573 TNRQ92752 1358 aa25.57■■□□□ 1.68
COLCA2-206ENST00000638573 KIF15Q9NS87 1388 aa25.57■■□□□ 1.68
COLCA2-206ENST00000638573 PTPRTO14522 1441 aa25.57■■□□□ 1.68
COLCA2-206ENST00000638573 RNF17Q9BXT8 1623 aaKnown RBP25.56■■□□□ 1.68
COLCA2-206ENST00000638573 ZNF142P52746 1687 aaPredicted RBP25.56■■□□□ 1.68
COLCA2-206ENST00000638573 DMRT2Q9Y5R5 561 aa25.56■■□□□ 1.68
COLCA2-206ENST00000638573 CROCC2H7BZ55 1655 aa25.55■■□□□ 1.68
COLCA2-206ENST00000638573 ABCC3O15438 1527 aa25.55■■□□□ 1.68
COLCA2-206ENST00000638573 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
COLCA2-206ENST00000638573 SHANK2Q9UPX8 1470 aa25.53■■□□□ 1.68
COLCA2-206ENST00000638573 DNMT1P26358 1616 aaKnown RBP25.53■■□□□ 1.68
COLCA2-206ENST00000638573 A2ML1A8K2U0 1454 aa25.53■■□□□ 1.68
COLCA2-206ENST00000638573 DUOX2Q9NRD8 1548 aa25.53■■□□□ 1.68
COLCA2-206ENST00000638573 FAM50AQ14320 339 aaKnown RBP25.51■■□□□ 1.67
COLCA2-206ENST00000638573 EIF2AK4Q9P2K8 1649 aaKnown RBP25.49■■□□□ 1.67
COLCA2-206ENST00000638573 FAM135AQ9P2D6 1515 aa25.49■■□□□ 1.67
COLCA2-206ENST00000638573 PLA2R1Q13018 1463 aa25.47■■□□□ 1.67
COLCA2-206ENST00000638573 ZNF335Q9H4Z2 1342 aaPredicted RBP25.47■■□□□ 1.67
COLCA2-206ENST00000638573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.47■■□□□ 1.672e-6■□□□□ 10.7
COLCA2-206ENST00000638573 LTBP4Q8N2S1 1624 aa25.47■■□□□ 1.67
COLCA2-206ENST00000638573 CEP152O94986 1710 aa25.46■■□□□ 1.67
COLCA2-206ENST00000638573 ERBINQ96RT1 1412 aa25.44■■□□□ 1.66
COLCA2-206ENST00000638573 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.44■■□□□ 1.663e-8■■□□□ 13.3
COLCA2-206ENST00000638573 ERVK-7P63135 1459 aa25.43■■□□□ 1.66
COLCA2-206ENST00000638573 PKD2Q13563 968 aa25.41■■□□□ 1.66
COLCA2-206ENST00000638573 PRDM15P57071 1507 aaPredicted RBP25.41■■□□□ 1.66
COLCA2-206ENST00000638573 ANKRD30AQ9BXX3 1397 aa25.41■■□□□ 1.66
COLCA2-206ENST00000638573 ZC3H13Q5T200 1668 aaKnown RBP25.4■■□□□ 1.66
COLCA2-206ENST00000638573 SPATA31D1Q6ZQQ2 1576 aa25.39■■□□□ 1.66
COLCA2-206ENST00000638573 NEURL4Q96JN8 1562 aa25.39■■□□□ 1.65
COLCA2-206ENST00000638573 UGGT1Q9NYU2 1555 aa25.37■■□□□ 1.65
COLCA2-206ENST00000638573 NLRP1Q9C000 1473 aa25.37■■□□□ 1.65
COLCA2-206ENST00000638573 ADGRL2O95490 1459 aa25.35■■□□□ 1.65
COLCA2-206ENST00000638573 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
COLCA2-206ENST00000638573 CFAP65Q6ZU64 1925 aaKnown RBP25.31■■□□□ 1.64
COLCA2-206ENST00000638573 THEMISQ8N1K5 641 aaPredicted RBP25.3■■□□□ 1.64
COLCA2-206ENST00000638573 ITGAEP38570 1179 aa25.29■■□□□ 1.64
COLCA2-206ENST00000638573 ANKLE2Q86XL3 938 aa25.29■■□□□ 1.64
COLCA2-206ENST00000638573 ARHGAP31Q2M1Z3 1444 aa25.29■■□□□ 1.64
COLCA2-206ENST00000638573 VWDEQ8N2E2 1590 aa25.28■■□□□ 1.64
COLCA2-206ENST00000638573 POLR1AO95602 1720 aaPredicted RBP25.28■■□□□ 1.64
COLCA2-206ENST00000638573 KANK1Q14678 1352 aa25.27■■□□□ 1.64
COLCA2-206ENST00000638573 ANKRD50Q9ULJ7 1429 aa25.27■■□□□ 1.64
COLCA2-206ENST00000638573 NPHP4O75161 1426 aaPredicted RBP25.25■■□□□ 1.63
COLCA2-206ENST00000638573 LMTK2Q8IWU2 1503 aa25.23■■□□□ 1.63
COLCA2-206ENST00000638573 UBR1Q8IWV7 1749 aa25.22■■□□□ 1.63
COLCA2-206ENST00000638573 LTKP29376 864 aa25.21■■□□□ 1.63
COLCA2-206ENST00000638573 SYNMO15061 1565 aa25.2■■□□□ 1.62
COLCA2-206ENST00000638573 MED14O60244 1454 aa25.2■■□□□ 1.62
COLCA2-206ENST00000638573 EFCAB6Q5THR3 1501 aa25.19■■□□□ 1.62
COLCA2-206ENST00000638573 PIK3C2BO00750 1634 aa25.19■■□□□ 1.62
COLCA2-206ENST00000638573 IDI1Q13907 227 aa25.18■■□□□ 1.62
COLCA2-206ENST00000638573 IQSEC2Q5JU85 1478 aa25.17■■□□□ 1.62
COLCA2-206ENST00000638573 UBAP1LF5GYI3 381 aa25.16■■□□□ 1.62
COLCA2-206ENST00000638573 ARHGAP23Q9P227 1491 aa25.15■■□□□ 1.62
COLCA2-206ENST00000638573 NOS1P29475 1434 aa25.15■■□□□ 1.62
COLCA2-206ENST00000638573 SCAF11Q99590 1463 aaKnown RBP25.15■■□□□ 1.62
COLCA2-206ENST00000638573 IQGAP1P46940 1657 aa25.14■■□□□ 1.62
COLCA2-206ENST00000638573 TXNDC2Q86VQ3 553 aa25.14■■□□□ 1.62
COLCA2-206ENST00000638573 SENP3Q9H4L4 574 aaPredicted RBP25.13■■□□□ 1.61
COLCA2-206ENST00000638573 ROCK1Q13464 1354 aa25.13■■□□□ 1.61
COLCA2-206ENST00000638573 SLIT1O75093 1534 aa25.12■■□□□ 1.61
COLCA2-206ENST00000638573 STAG3Q9UJ98 1225 aa25.11■■□□□ 1.61
COLCA2-206ENST00000638573 TMEM2Q9UHN6 1383 aa25.1■■□□□ 1.61
COLCA2-206ENST00000638573 UNC13BO14795 1591 aa25.1■■□□□ 1.61
COLCA2-206ENST00000638573 STRCP1A6NGW2 1772 aa25.09■■□□□ 1.61
COLCA2-206ENST00000638573 CPS1P31327 1500 aa25.07■■□□□ 1.6
COLCA2-206ENST00000638573 TET3O43151 1660 aa25.05■■□□□ 1.6
COLCA2-206ENST00000638573 RRBP1Q9P2E9 1410 aaKnown RBP25.04■■□□□ 1.6
COLCA2-206ENST00000638573 ADGRB3O60242 1522 aa25.04■■□□□ 1.6
COLCA2-206ENST00000638573 PIP4K2BP78356 416 aa25.03■■□□□ 1.6
COLCA2-206ENST00000638573 NUP155O75694 1391 aa25.03■■□□□ 1.6
COLCA2-206ENST00000638573 EID1Q9Y6B2 187 aa25.02■■□□□ 1.6
COLCA2-206ENST00000638573 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
COLCA2-206ENST00000638573 RPRD2Q5VT52 1461 aaKnown RBP25.02■■□□□ 1.6
COLCA2-206ENST00000638573 LRRC7Q96NW7 1537 aa25.02■■□□□ 1.6
COLCA2-206ENST00000638573 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
COLCA2-206ENST00000638573 E9PCH4 1651 aa25.01■■□□□ 1.59
COLCA2-206ENST00000638573 SLC26A8Q96RN1 970 aa25■■□□□ 1.59
COLCA2-206ENST00000638573 IQGAP3Q86VI3 1631 aa24.98■■□□□ 1.59
COLCA2-206ENST00000638573 SLC52A1Q9NWF4 448 aa24.98■■□□□ 1.59
COLCA2-206ENST00000638573 GCC2Q8IWJ2 1684 aa24.97■■□□□ 1.59
COLCA2-206ENST00000638573 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
COLCA2-206ENST00000638573 NUTM2DQ5VT03 806 aaPredicted RBP24.96■■□□□ 1.59
COLCA2-206ENST00000638573 RBM33Q96EV2 1170 aaKnown RBP24.95■■□□□ 1.58
COLCA2-206ENST00000638573 KDM5AP29375 1690 aaKnown RBP24.94■■□□□ 1.58
COLCA2-206ENST00000638573 ZFYVE9O95405 1425 aa24.94■■□□□ 1.58
COLCA2-206ENST00000638573 HSPA1LP34931 641 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms