RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	LTV1	Q96GA3	475 aa	Predicted RBP	18.58	■□□□□ 0.57
NEDD4L-238	ENST00000635997	RTN4	Q9NQC3	1192 aa	Known RBP	18.58	■□□□□ 0.57
NEDD4L-238	ENST00000635997	KIF21B	O75037	1637 aa		18.58	■□□□□ 0.57
NEDD4L-238	ENST00000635997	DENND4B	O75064	1496 aa	Predicted RBP	18.57	■□□□□ 0.56
NEDD4L-238	ENST00000635997	DHX57	Q6P158	1386 aa	Known RBP	18.57	■□□□□ 0.56
NEDD4L-238	ENST00000635997	MYOM3	Q5VTT5	1437 aa		18.56	■□□□□ 0.56
NEDD4L-238	ENST00000635997	KLHL34	Q8N239	644 aa		18.56	■□□□□ 0.56
NEDD4L-238	ENST00000635997	ERICH3	Q5RHP9	1530 aa		18.56	■□□□□ 0.56
NEDD4L-238	ENST00000635997	MINK1	Q8N4C8	1332 aa	Predicted RBP	18.55	■□□□□ 0.56
NEDD4L-238	ENST00000635997	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.55	■□□□□ 0.56	1e-6	■□□□□ 8.7
NEDD4L-238	ENST00000635997	ESCO1	Q5FWF5	840 aa		18.54	■□□□□ 0.56
NEDD4L-238	ENST00000635997	TRO	Q12816	1431 aa	Predicted RBP	18.54	■□□□□ 0.56
NEDD4L-238	ENST00000635997	PHLDB1	Q86UU1	1377 aa		18.54	■□□□□ 0.56
NEDD4L-238	ENST00000635997	IQGAP2	Q13576	1575 aa		18.54	■□□□□ 0.56
NEDD4L-238	ENST00000635997	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.54	■□□□□ 0.56
NEDD4L-238	ENST00000635997	WDR62	O43379	1518 aa		18.53	■□□□□ 0.56
NEDD4L-238	ENST00000635997	AMPH	P49418	695 aa		18.53	■□□□□ 0.56
NEDD4L-238	ENST00000635997	SLC52A1	Q9NWF4	448 aa		18.52	■□□□□ 0.56
NEDD4L-238	ENST00000635997	ADGRL1	O94910	1474 aa		18.51	■□□□□ 0.55
NEDD4L-238	ENST00000635997	DEK	P35659	375 aa	Known RBP	18.51	■□□□□ 0.55
NEDD4L-238	ENST00000635997	TERF2IP	Q9NYB0	399 aa		18.51	■□□□□ 0.55
NEDD4L-238	ENST00000635997	USP35	Q9P2H5	1018 aa		18.5	■□□□□ 0.55
NEDD4L-238	ENST00000635997	KTN1	Q86UP2	1357 aa	Known RBP	18.5	■□□□□ 0.55
NEDD4L-238	ENST00000635997	CCDC146	Q8IYE0	955 aa		18.49	■□□□□ 0.55
NEDD4L-238	ENST00000635997	CCDC144A	A2RUR9	1427 aa		18.49	■□□□□ 0.55
NEDD4L-238	ENST00000635997	KIF21A	Q7Z4S6	1674 aa		18.49	■□□□□ 0.55
NEDD4L-238	ENST00000635997	PLEKHH2	Q8IVE3	1493 aa		18.49	■□□□□ 0.55
NEDD4L-238	ENST00000635997	PRKCSH	P14314	528 aa	Predicted RBP	18.48	■□□□□ 0.55
NEDD4L-238	ENST00000635997	SYTL4	Q96C24	671 aa	Predicted RBP	18.46	■□□□□ 0.55
NEDD4L-238	ENST00000635997	CCER2	I3L3R5	266 aa		18.46	■□□□□ 0.54
NEDD4L-238	ENST00000635997	FBXO31	Q5XUX0	539 aa	Predicted RBP	18.45	■□□□□ 0.54
NEDD4L-238	ENST00000635997	PANK3	Q9H999	370 aa		18.45	■□□□□ 0.54
NEDD4L-238	ENST00000635997	ARAP1	Q96P48	1450 aa		18.45	■□□□□ 0.54
NEDD4L-238	ENST00000635997	CASKIN1	Q8WXD9	1431 aa		18.44	■□□□□ 0.54
NEDD4L-238	ENST00000635997	RBM33	Q96EV2	1170 aa	Known RBP	18.43	■□□□□ 0.54
NEDD4L-238	ENST00000635997	APBB1	O00213	710 aa		18.43	■□□□□ 0.54
NEDD4L-238	ENST00000635997	RTF1	Q92541	710 aa	Known RBP	18.43	■□□□□ 0.54
NEDD4L-238	ENST00000635997	PPP4R2	Q9NY27	417 aa		18.42	■□□□□ 0.54
NEDD4L-238	ENST00000635997	NGLY1	Q96IV0	654 aa		18.41	■□□□□ 0.54
NEDD4L-238	ENST00000635997	TAOK2	Q9UL54	1235 aa		18.41	■□□□□ 0.54
NEDD4L-238	ENST00000635997	FANCA	O15360	1455 aa		18.41	■□□□□ 0.54
NEDD4L-238	ENST00000635997	RRP7A	Q9Y3A4	280 aa	Known RBP	18.41	■□□□□ 0.54
NEDD4L-238	ENST00000635997	TPRN	Q4KMQ1	711 aa		18.41	■□□□□ 0.54
NEDD4L-238	ENST00000635997	FGD6	Q6ZV73	1430 aa		18.41	■□□□□ 0.54
NEDD4L-238	ENST00000635997	ADAMTS2	O95450	1211 aa		18.41	■□□□□ 0.54
NEDD4L-238	ENST00000635997	PRX	Q9BXM0	1461 aa		18.41	■□□□□ 0.54
NEDD4L-238	ENST00000635997	STRN4	Q9NRL3	753 aa		18.4	■□□□□ 0.54
NEDD4L-238	ENST00000635997	NUTM2G	Q5VZR2	741 aa		18.39	■□□□□ 0.54
NEDD4L-238	ENST00000635997	TMX4	Q9H1E5	349 aa	Predicted RBP	18.39	■□□□□ 0.54
NEDD4L-238	ENST00000635997	TMEM132E	Q6IEE7	984 aa		18.39	■□□□□ 0.53
NEDD4L-238	ENST00000635997	ARHGEF11	O15085	1522 aa		18.39	■□□□□ 0.53
NEDD4L-238	ENST00000635997	PNN	Q9H307	717 aa	Known RBP	18.39	■□□□□ 0.53
NEDD4L-238	ENST00000635997	ANKRD50	Q9ULJ7	1429 aa		18.38	■□□□□ 0.53
NEDD4L-238	ENST00000635997	OS9	Q13438	667 aa	Predicted RBP	18.38	■□□□□ 0.53
NEDD4L-238	ENST00000635997	EIF4G3	O43432	1585 aa	Known RBP	18.38	■□□□□ 0.53
NEDD4L-238	ENST00000635997	CLUAP1	Q96AJ1	413 aa		18.38	■□□□□ 0.53
NEDD4L-238	ENST00000635997	GPRASP1	Q5JY77	1395 aa		18.38	■□□□□ 0.53
NEDD4L-238	ENST00000635997	RALBP1	Q15311	655 aa		18.37	■□□□□ 0.53
NEDD4L-238	ENST00000635997	EIF3A	Q14152	1382 aa	Known RBP	18.36	■□□□□ 0.53
NEDD4L-238	ENST00000635997	NLRP13	Q86W25	1043 aa		18.35	■□□□□ 0.53
NEDD4L-238	ENST00000635997	ELL2	O00472	640 aa	Predicted RBP	18.34	■□□□□ 0.53
NEDD4L-238	ENST00000635997	PMFBP1	Q8TBY8	1022 aa		18.34	■□□□□ 0.53
NEDD4L-238	ENST00000635997	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.34	■□□□□ 0.53
NEDD4L-238	ENST00000635997	LRRC9	Q6ZRR7	1453 aa		18.34	■□□□□ 0.53
NEDD4L-238	ENST00000635997	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.33	■□□□□ 0.53
NEDD4L-238	ENST00000635997	NLRP2	Q9NX02	1062 aa		18.33	■□□□□ 0.52
NEDD4L-238	ENST00000635997	XPC	Q01831	940 aa	Predicted RBP	18.33	■□□□□ 0.52
NEDD4L-238	ENST00000635997	PRDM11	Q9NQV5	511 aa		18.33	■□□□□ 0.52
NEDD4L-238	ENST00000635997	GTF2E1	P29083	439 aa	Predicted RBP	18.32	■□□□□ 0.52
NEDD4L-238	ENST00000635997	RCAN3	Q9UKA8	241 aa		18.32	■□□□□ 0.52
NEDD4L-238	ENST00000635997	NCOA2	Q15596	1464 aa		18.32	■□□□□ 0.52
NEDD4L-238	ENST00000635997	LMTK3	Q96Q04	1460 aa		18.32	■□□□□ 0.52
NEDD4L-238	ENST00000635997	WDR7	Q9Y4E6	1490 aa		18.32	■□□□□ 0.52
NEDD4L-238	ENST00000635997	NLRP6	P59044	892 aa		18.32	■□□□□ 0.52
NEDD4L-238	ENST00000635997	USP47	Q96K76	1375 aa		18.32	■□□□□ 0.52
NEDD4L-238	ENST00000635997	CDK13	Q14004	1512 aa	Known RBP	18.31	■□□□□ 0.52
NEDD4L-238	ENST00000635997	EVC2	Q86UK5	1308 aa		18.31	■□□□□ 0.52
NEDD4L-238	ENST00000635997	EFCAB5	A4FU69	1503 aa		18.31	■□□□□ 0.52
NEDD4L-238	ENST00000635997	COG3	Q96JB2	828 aa		18.3	■□□□□ 0.52
NEDD4L-238	ENST00000635997	PDE3B	Q13370	1112 aa		18.29	■□□□□ 0.52
NEDD4L-238	ENST00000635997	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.29	■□□□□ 0.52
NEDD4L-238	ENST00000635997	CUL7	Q14999	1698 aa		18.29	■□□□□ 0.52
NEDD4L-238	ENST00000635997	NCKAP5L	Q9HCH0	1330 aa		18.29	■□□□□ 0.52
NEDD4L-238	ENST00000635997	BCL2L13	Q9BXK5	485 aa		18.29	■□□□□ 0.52
NEDD4L-238	ENST00000635997	CADPS2	Q86UW7	1296 aa		18.28	■□□□□ 0.52
NEDD4L-238	ENST00000635997	ABTB2	Q8N961	1025 aa		18.28	■□□□□ 0.52
NEDD4L-238	ENST00000635997	C9orf84	Q5VXU9	1444 aa		18.28	■□□□□ 0.52
NEDD4L-238	ENST00000635997	CFAP70	Q5T0N1	1121 aa		18.28	■□□□□ 0.52
NEDD4L-238	ENST00000635997	ANP32B	Q92688	251 aa	Known RBP	18.28	■□□□□ 0.52
NEDD4L-238	ENST00000635997	EPRS	P07814	1512 aa	Known RBP	18.27	■□□□□ 0.52
NEDD4L-238	ENST00000635997	FYCO1	Q9BQS8	1478 aa		18.27	■□□□□ 0.52
NEDD4L-238	ENST00000635997	RRBP1	Q9P2E9	1410 aa	Known RBP	18.27	■□□□□ 0.51
NEDD4L-238	ENST00000635997	TNR	Q92752	1358 aa		18.25	■□□□□ 0.51
NEDD4L-238	ENST00000635997	ABCC2	Q92887	1545 aa		18.25	■□□□□ 0.51
NEDD4L-238	ENST00000635997	GOLGA2	Q08379	1002 aa		18.25	■□□□□ 0.51
NEDD4L-238	ENST00000635997	ITPRIP	Q8IWB1	547 aa		18.24	■□□□□ 0.51
NEDD4L-238	ENST00000635997	NUP160	Q12769	1436 aa		18.24	■□□□□ 0.51
NEDD4L-238	ENST00000635997	NBPF1	Q3BBV0	1214 aa		18.24	■□□□□ 0.51
NEDD4L-238	ENST00000635997	MS4A1	P11836	297 aa		18.24	■□□□□ 0.51
NEDD4L-238	ENST00000635997	IDI1	Q13907	227 aa		18.24	■□□□□ 0.51

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